RNA–Protein interactions for RNA: ENST00000478909.5

CMSS1-203, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 5

Gene CMSS1, Length 753 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-203ENST00000478909 SOS1Q07889 1333 aaPredicted RBP7.76□□□□□ -1.17
CMSS1-203ENST00000478909 SBNO1A3KN83 1393 aa7.75□□□□□ -1.17
CMSS1-203ENST00000478909 FLT4P35916 1363 aa7.75□□□□□ -1.17
CMSS1-203ENST00000478909 MCCD1P59942 119 aaPredicted RBP7.75□□□□□ -1.17
CMSS1-203ENST00000478909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.75□□□□□ -1.17
CMSS1-203ENST00000478909 FTSJ3Q8IY81 847 aaKnown RBP7.75□□□□□ -1.17
CMSS1-203ENST00000478909 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
CMSS1-203ENST00000478909 IPO9Q96P70 1041 aaKnown RBP7.75□□□□□ -1.17
CMSS1-203ENST00000478909 RWDD1Q9H446 243 aaPredicted RBP7.75□□□□□ -1.17
CMSS1-203ENST00000478909 ZNF330Q9Y3S2 320 aaPredicted RBP7.75□□□□□ -1.17
CMSS1-203ENST00000478909 NWD1Q149M9 1564 aa7.75□□□□□ -1.17
CMSS1-203ENST00000478909 ACEP12821 1306 aa7.75□□□□□ -1.17
CMSS1-203ENST00000478909 PRR36Q9H6K5 1346 aa7.75□□□□□ -1.17
CMSS1-203ENST00000478909 PHRF1Q9P1Y6 1649 aaKnown RBP7.74□□□□□ -1.17
CMSS1-203ENST00000478909 KDRP35968 1356 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 EIF5BO60841 1220 aaKnown RBP7.74□□□□□ -1.17
CMSS1-203ENST00000478909 BCAR3O75815 825 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
CMSS1-203ENST00000478909 PRKAR2BP31323 418 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 MVPQ14764 893 aaKnown RBP7.74□□□□□ -1.17
CMSS1-203ENST00000478909 C20orf194Q5TEA3 1177 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 RNF20Q5VTR2 975 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 FOXD4L5Q5VV16 416 aaPredicted RBP7.74□□□□□ -1.17
CMSS1-203ENST00000478909 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 DZIP1LQ8IYY4 767 aaKnown RBP7.74□□□□□ -1.17
CMSS1-203ENST00000478909 ZNF592Q92610 1267 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 STK17AQ9UEE5 414 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 AMOTL2Q9Y2J4 779 aa7.74□□□□□ -1.17
CMSS1-203ENST00000478909 KIAA0232Q92628 1395 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 PLEKHG2Q9H7P9 1386 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 ADGRL3Q9HAR2 1447 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 ZNF853P0CG23 659 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 HDAC1Q13547 482 aaPredicted RBP7.73□□□□□ -1.17
CMSS1-203ENST00000478909 ATF7IPQ6VMQ6 1270 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 ANKLE2Q86XL3 938 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 NME9Q86XW9 330 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 CHMP4AQ9BY43 222 aa7.73□□□□□ -1.17
CMSS1-203ENST00000478909 RRP7AQ9Y3A4 280 aaKnown RBP7.73□□□□□ -1.17
CMSS1-203ENST00000478909 DLG5Q8TDM6 1919 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 SENP3-EIF4A1A0A087X0R7 540 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 SLC35F4A4IF30 521 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 ATP5J2-PTCD1G3V325 749 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 HTATSF1O43719 755 aaKnown RBP7.72□□□□□ -1.17
CMSS1-203ENST00000478909 SCTRP47872 440 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 CC2D2BQ6DHV5 1058 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 CCDC155Q8N6L0 562 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 SMC4Q9NTJ3 1288 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 NOP58Q9Y2X3 529 aaKnown RBP7.72□□□□□ -1.17
CMSS1-203ENST00000478909 LMTK3Q96Q04 1460 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 PIK3C2AO00443 1686 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 KIF1AQ12756 1690 aa7.72□□□□□ -1.17
CMSS1-203ENST00000478909 NCOA3Q9Y6Q9 1424 aa7.71□□□□□ -1.17
CMSS1-203ENST00000478909 IRF5Q13568 498 aa7.71□□□□□ -1.18
CMSS1-203ENST00000478909 FRAT1Q92837 279 aaPredicted RBP7.71□□□□□ -1.18
CMSS1-203ENST00000478909 PCDHB11Q9Y5F2 797 aa7.71□□□□□ -1.18
CMSS1-203ENST00000478909 MST1RQ04912 1400 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 PEAK1Q9H792 1746 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 CACNA1FO60840 1977 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 EXOSC9Q06265 439 aaKnown RBP7.7□□□□□ -1.18
CMSS1-203ENST00000478909 ZSCAN1Q8NBB4 408 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 API5Q9BZZ5 524 aaKnown RBP7.7□□□□□ -1.18
CMSS1-203ENST00000478909 PRM3Q9NNZ6 103 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 CEP126Q9P2H0 1117 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 COG6Q9Y2V7 657 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 LRRC37A3O60309 1634 aa7.7□□□□□ -1.18
CMSS1-203ENST00000478909 PPM1GO15355 546 aaPredicted RBP7.69□□□□□ -1.18
CMSS1-203ENST00000478909 TRIM27P14373 513 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 GPR161Q8N6U8 529 aaKnown RBP7.69□□□□□ -1.18
CMSS1-203ENST00000478909 NGDNQ8NEJ9 315 aaKnown RBP7.69□□□□□ -1.18
CMSS1-203ENST00000478909 GAS2L2Q8NHY3 880 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 SSH1Q8WYL5 1049 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 SLC26A8Q96RN1 970 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 GDPD2Q9HCC8 539 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 IGSF1Q8N6C5 1336 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 NPHP4O75161 1426 aaPredicted RBP7.69□□□□□ -1.18
CMSS1-203ENST00000478909 DCCP43146 1447 aa7.69□□□□□ -1.18
CMSS1-203ENST00000478909 ABCC6O95255 1503 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 A0A1W2PRU2 124 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 MEN1O00255 615 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 TRAK2O60296 914 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 ITGA6P23229 1130 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 CEBPAP49715 358 aaPredicted RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 RNF144AP50876 292 aaPredicted RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 EIF4A2Q14240 407 aaKnown RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 LYSMD3Q7Z3D4 306 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 KCNH5Q8NCM2 988 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 PANK1Q8TE04 598 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 NANOS1Q8WY41 292 aaKnown RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 TSR2Q969E8 191 aaKnown RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 OSBPL3Q9H4L5 887 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 UPF2Q9HAU5 1272 aaKnown RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 USP35Q9P2H5 1018 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 MARF1Q9Y4F3 1742 aaKnown RBP7.68□□□□□ -1.18
CMSS1-203ENST00000478909 ABCC4O15439 1325 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 PTPRCP08575 1304 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 OVOS2A0A0G2JMS6 1433 aa7.68□□□□□ -1.18
CMSS1-203ENST00000478909 RGPD8O14715 1765 aaPredicted RBP7.67□□□□□ -1.18
CMSS1-203ENST00000478909 MCM6Q14566 821 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms