RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 SLFN5Q08AF3 891 aa17.54■□□□□ 0.4
HDAC7-222ENST00000477937 USP50Q70EL3 339 aaPredicted RBP17.54■□□□□ 0.4
HDAC7-222ENST00000477937 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
HDAC7-222ENST00000477937 DBNDD1Q9H9R9 158 aa17.54■□□□□ 0.4
HDAC7-222ENST00000477937 XDHP47989 1333 aa17.53■□□□□ 0.4
HDAC7-222ENST00000477937 G3V3G9 751 aa17.53■□□□□ 0.4
HDAC7-222ENST00000477937 ITGBL1O95965 494 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-222ENST00000477937 GMPSP49915 693 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-222ENST00000477937 DCAF8Q5TAQ9 597 aa17.53■□□□□ 0.4
HDAC7-222ENST00000477937 MAP1SQ66K74 1059 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-222ENST00000477937 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
HDAC7-222ENST00000477937 ADARB2Q9NS39 739 aaKnown RBP17.53■□□□□ 0.4
HDAC7-222ENST00000477937 BSDC1Q9NW68 430 aaPredicted RBP17.53■□□□□ 0.4
HDAC7-222ENST00000477937 PASKQ96RG2 1323 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 ECE2O60344 883 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 CSF1RP07333 972 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 ATP2B4P23634 1241 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 IGHMBP2P38935 993 aaKnown RBP17.52■□□□□ 0.4
HDAC7-222ENST00000477937 DOK7Q18PE1 504 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 SLC4A10Q6U841 1118 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
HDAC7-222ENST00000477937 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
HDAC7-222ENST00000477937 ITGA6P23229 1130 aa17.51■□□□□ 0.39
HDAC7-222ENST00000477937 MINPP1Q9UNW1 487 aa17.51■□□□□ 0.39
HDAC7-222ENST00000477937 SCN9AQ15858 1988 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 PSMD14O00487 310 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 ALDH1L1O75891 902 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 MRPL50Q8N5N7 158 aaKnown RBP17.5■□□□□ 0.39
HDAC7-222ENST00000477937 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 SRCIN1Q9C0H9 1055 aa17.5■□□□□ 0.39
HDAC7-222ENST00000477937 C9orf78Q9NZ63 289 aaPredicted RBP17.5■□□□□ 0.39
HDAC7-222ENST00000477937 CNOT7Q9UIV1 285 aaKnown RBP17.5■□□□□ 0.39
HDAC7-222ENST00000477937 H7C1D1 291 aa17.49■□□□□ 0.39
HDAC7-222ENST00000477937 GRM8O00222 908 aa17.49■□□□□ 0.39
HDAC7-222ENST00000477937 FOXO4P98177 505 aa17.49■□□□□ 0.39
HDAC7-222ENST00000477937 JMYQ8N9B5 988 aa17.49■□□□□ 0.39
HDAC7-222ENST00000477937 TRPM7Q96QT4 1865 aa17.49■□□□□ 0.39
HDAC7-222ENST00000477937 PSME4Q14997 1843 aa17.49■□□□□ 0.39
HDAC7-222ENST00000477937 ANKRD18BA2A2Z9 1011 aa17.48■□□□□ 0.39
HDAC7-222ENST00000477937 TMEM88BA6NKF7 163 aa17.48■□□□□ 0.39
HDAC7-222ENST00000477937 TRMT2AQ8IZ69 625 aaKnown RBP17.48■□□□□ 0.39
HDAC7-222ENST00000477937 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
HDAC7-222ENST00000477937 DPF2Q92785 391 aa17.48■□□□□ 0.39
HDAC7-222ENST00000477937 KCNQ5Q9NR82 932 aa17.48■□□□□ 0.39
HDAC7-222ENST00000477937 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
HDAC7-222ENST00000477937 PTPRCP08575 1304 aa17.47■□□□□ 0.39
HDAC7-222ENST00000477937 RPS12P25398 132 aaKnown RBP17.47■□□□□ 0.39
HDAC7-222ENST00000477937 CCT4P50991 539 aaKnown RBP17.47■□□□□ 0.39
HDAC7-222ENST00000477937 IFIT5Q13325 482 aaKnown RBP17.47■□□□□ 0.39
HDAC7-222ENST00000477937 MICALL2Q8IY33 904 aa17.47■□□□□ 0.39
HDAC7-222ENST00000477937 ANKRD2Q9GZV1 360 aa17.47■□□□□ 0.39
HDAC7-222ENST00000477937 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
HDAC7-222ENST00000477937 POLR2AP24928 1970 aaKnown RBP17.46■□□□□ 0.39
HDAC7-222ENST00000477937 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
HDAC7-222ENST00000477937 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
HDAC7-222ENST00000477937 DIEXFQ68CQ4 756 aaKnown RBP17.46■□□□□ 0.39
HDAC7-222ENST00000477937 LMBR1LQ6UX01 489 aa17.46■□□□□ 0.39
HDAC7-222ENST00000477937 LEMD3Q9Y2U8 911 aa17.46■□□□□ 0.39
HDAC7-222ENST00000477937 MED23Q9ULK4 1368 aa17.45■□□□□ 0.38
HDAC7-222ENST00000477937 WTIPA6NIX2 430 aaPredicted RBP17.45■□□□□ 0.38
HDAC7-222ENST00000477937 CCDC57Q2TAC2 916 aa17.45■□□□□ 0.38
HDAC7-222ENST00000477937 PODNQ7Z5L7 613 aa17.45■□□□□ 0.38
HDAC7-222ENST00000477937 ZC3H15Q8WU90 426 aaKnown RBP17.45■□□□□ 0.38
HDAC7-222ENST00000477937 SHTN1A0MZ66 631 aa17.44■□□□□ 0.38
HDAC7-222ENST00000477937 CT47B1P0C2W7 299 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-222ENST00000477937 HIRAP54198 1017 aaPredicted RBP17.44■□□□□ 0.38
HDAC7-222ENST00000477937 TRPM4Q8TD43 1214 aa17.44■□□□□ 0.38
HDAC7-222ENST00000477937 MKRN1Q9UHC7 482 aaKnown RBP17.44■□□□□ 0.38
HDAC7-222ENST00000477937 PGAP2Q9UHJ9 254 aa17.44■□□□□ 0.38
HDAC7-222ENST00000477937 CHRNDQ07001 517 aa17.43■□□□□ 0.38
HDAC7-222ENST00000477937 TAF7LQ5H9L4 462 aa17.43■□□□□ 0.38
HDAC7-222ENST00000477937 EPHA10Q5JZY3 1008 aa17.43■□□□□ 0.38
HDAC7-222ENST00000477937 MIER1Q8N108 512 aa17.43■□□□□ 0.38
HDAC7-222ENST00000477937 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
HDAC7-222ENST00000477937 ZNF804BA4D1E1 1349 aa17.43■□□□□ 0.38
HDAC7-222ENST00000477937 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 KCNJ4P48050 445 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 RSBN1LQ6PCB5 846 aaPredicted RBP17.42■□□□□ 0.38
HDAC7-222ENST00000477937 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 SAMD7Q7Z3H4 446 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 AGBL3Q8NEM8 1001 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 COA1Q9GZY4 146 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 A0A1B0GUL6 1792 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 UTYO14607 1347 aa17.42■□□□□ 0.38
HDAC7-222ENST00000477937 CNTNAP1P78357 1384 aa17.41■□□□□ 0.38
HDAC7-222ENST00000477937 TRAF5O00463 557 aa17.41■□□□□ 0.38
HDAC7-222ENST00000477937 NBPF7P0C2Y1 421 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-222ENST00000477937 FMR1Q06787 632 aaKnown RBP eCLIP17.41■□□□□ 0.38
HDAC7-222ENST00000477937 TBC1D10BQ4KMP7 808 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-222ENST00000477937 LDHAL6AQ6ZMR3 332 aa17.41■□□□□ 0.38
HDAC7-222ENST00000477937 SUCLG2Q96I99 432 aa17.41■□□□□ 0.38
HDAC7-222ENST00000477937 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
HDAC7-222ENST00000477937 DEFB115Q30KQ5 88 aa17.4■□□□□ 0.38
HDAC7-222ENST00000477937 RBM26Q5T8P6 1007 aaKnown RBP17.4■□□□□ 0.38
HDAC7-222ENST00000477937 CDC37L1Q7L3B6 337 aa17.4■□□□□ 0.38
HDAC7-222ENST00000477937 TXNRD3Q86VQ6 643 aa17.4■□□□□ 0.38
HDAC7-222ENST00000477937 ZNF594Q96JF6 807 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms