RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 BSDC1Q9NW68 430 aaPredicted RBP19.84■□□□□ 0.77
COPS3-207ENST00000477299 DUOX1Q9NRD9 1551 aa19.83■□□□□ 0.77
COPS3-207ENST00000477299 CCDC93Q567U6 631 aa19.83■□□□□ 0.77
COPS3-207ENST00000477299 TAF7LQ5H9L4 462 aa19.83■□□□□ 0.77
COPS3-207ENST00000477299 SIL1Q9H173 461 aa19.83■□□□□ 0.77
COPS3-207ENST00000477299 TAF5LO75529 589 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 LDHAL6AQ6ZMR3 332 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 MPHOSPH8Q99549 860 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 NSFL1CQ9UNZ2 370 aaKnown RBP19.82■□□□□ 0.76
COPS3-207ENST00000477299 HDAC5Q9UQL6 1122 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 RIPOR2Q9Y4F9 1068 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 PCDHB15Q9Y5E8 787 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 CHD4Q14839 1912 aa19.82■□□□□ 0.76
COPS3-207ENST00000477299 DICER1Q9UPY3 1922 aaKnown RBP19.81■□□□□ 0.76
COPS3-207ENST00000477299 GRIN3BO60391 1043 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 CHRNDQ07001 517 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 POLA2Q14181 598 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 ATG9AQ7Z3C6 839 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 MPNDQ8N594 471 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 SSH3Q8TE77 659 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 ZNF277Q9NRM2 450 aaPredicted RBP19.81■□□□□ 0.76
COPS3-207ENST00000477299 POLLQ9UGP5 575 aa19.81■□□□□ 0.76
COPS3-207ENST00000477299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.81■□□□□ 0.76
COPS3-207ENST00000477299 CNNM1Q9NRU3 951 aa19.8■□□□□ 0.76
COPS3-207ENST00000477299 COL4A5P29400 1685 aa19.8■□□□□ 0.76
COPS3-207ENST00000477299 CENPBP07199 599 aaPredicted RBP19.79■□□□□ 0.76
COPS3-207ENST00000477299 DPP8Q6V1X1 898 aaPredicted RBP19.79■□□□□ 0.76
COPS3-207ENST00000477299 TMC4Q7Z404 712 aa19.79■□□□□ 0.76
COPS3-207ENST00000477299 COPRSQ9NQ92 184 aa19.79■□□□□ 0.76
COPS3-207ENST00000477299 EYA2O00167 538 aa19.78■□□□□ 0.76
COPS3-207ENST00000477299 FKBP4Q02790 459 aaKnown RBP eCLIP19.78■□□□□ 0.76
COPS3-207ENST00000477299 CC2D2BQ6DHV5 1058 aa19.78■□□□□ 0.76
COPS3-207ENST00000477299 RTKN2Q8IZC4 609 aa19.78■□□□□ 0.76
COPS3-207ENST00000477299 TBC1D16Q8TBP0 767 aa19.78■□□□□ 0.76
COPS3-207ENST00000477299 TAOK3Q9H2K8 898 aa19.78■□□□□ 0.76
COPS3-207ENST00000477299 ANKIB1Q9P2G1 1089 aa19.78■□□□□ 0.76
COPS3-207ENST00000477299 DCAF8L1A6NGE4 600 aa19.77■□□□□ 0.76
COPS3-207ENST00000477299 KLRK1P26718 216 aa19.77■□□□□ 0.76
COPS3-207ENST00000477299 SOGA3Q5TF21 947 aa19.77■□□□□ 0.76
COPS3-207ENST00000477299 PODXL2Q9NZ53 605 aa19.77■□□□□ 0.76
COPS3-207ENST00000477299 C6orf229H3BNL8 230 aa19.76■□□□□ 0.75
COPS3-207ENST00000477299 RIMBP2O15034 1052 aa19.76■□□□□ 0.75
COPS3-207ENST00000477299 TXNRD3Q86VQ6 643 aa19.76■□□□□ 0.75
COPS3-207ENST00000477299 RPAP2Q8IXW5 612 aaPredicted RBP19.76■□□□□ 0.75
COPS3-207ENST00000477299 PSMD1Q99460 953 aa19.76■□□□□ 0.75
COPS3-207ENST00000477299 RTFDC1Q9BY42 306 aaPredicted RBP19.76■□□□□ 0.75
COPS3-207ENST00000477299 XDHP47989 1333 aa19.76■□□□□ 0.75
COPS3-207ENST00000477299 UFL1O94874 794 aa19.75■□□□□ 0.75
COPS3-207ENST00000477299 C9orf131Q5VYM1 1079 aa19.75■□□□□ 0.75
COPS3-207ENST00000477299 VGLL2Q8N8G2 317 aa19.75■□□□□ 0.75
COPS3-207ENST00000477299 TMX4Q9H1E5 349 aaPredicted RBP19.75■□□□□ 0.75
COPS3-207ENST00000477299 CHMP4BQ9H444 224 aaKnown RBP19.75■□□□□ 0.75
COPS3-207ENST00000477299 LTBP3Q9NS15 1303 aa19.75■□□□□ 0.75
COPS3-207ENST00000477299 SURF6O75683 361 aaKnown RBP19.74■□□□□ 0.75
COPS3-207ENST00000477299 SASH1O94885 1247 aa19.74■□□□□ 0.75
COPS3-207ENST00000477299 AOC3Q16853 763 aa19.74■□□□□ 0.75
COPS3-207ENST00000477299 METTL24Q5JXM2 366 aa19.74■□□□□ 0.75
COPS3-207ENST00000477299 GGA1Q9UJY5 639 aa19.74■□□□□ 0.75
COPS3-207ENST00000477299 EXOC6BQ9Y2D4 811 aa19.74■□□□□ 0.75
COPS3-207ENST00000477299 IARSP41252 1262 aaKnown RBP19.73■□□□□ 0.75
COPS3-207ENST00000477299 TFCP2Q12800 502 aa19.73■□□□□ 0.75
COPS3-207ENST00000477299 ANKRD2Q9GZV1 360 aa19.73■□□□□ 0.75
COPS3-207ENST00000477299 RNF181Q9P0P0 153 aa19.73■□□□□ 0.75
COPS3-207ENST00000477299 TIAM2Q8IVF5 1701 aa19.73■□□□□ 0.75
COPS3-207ENST00000477299 SCN9AQ15858 1988 aa19.72■□□□□ 0.75
COPS3-207ENST00000477299 CIAO1O76071 339 aa19.72■□□□□ 0.75
COPS3-207ENST00000477299 LMNB1P20700 586 aa19.72■□□□□ 0.75
COPS3-207ENST00000477299 DOK7Q18PE1 504 aa19.72■□□□□ 0.75
COPS3-207ENST00000477299 ZNF804BA4D1E1 1349 aa19.72■□□□□ 0.75
COPS3-207ENST00000477299 IRS2Q9Y4H2 1338 aa19.72■□□□□ 0.75
COPS3-207ENST00000477299 PPIP5K2O43314 1243 aa19.71■□□□□ 0.75
COPS3-207ENST00000477299 PDE8BO95263 885 aa19.71■□□□□ 0.75
COPS3-207ENST00000477299 ATP2B4P23634 1241 aa19.71■□□□□ 0.75
COPS3-207ENST00000477299 G3BP1Q13283 466 aaKnown RBP eCLIP19.71■□□□□ 0.75
COPS3-207ENST00000477299 WASHC4Q2M389 1173 aa19.71■□□□□ 0.75
COPS3-207ENST00000477299 KCNQ5Q9NR82 932 aa19.71■□□□□ 0.75
COPS3-207ENST00000477299 NOP58Q9Y2X3 529 aaKnown RBP19.71■□□□□ 0.75
COPS3-207ENST00000477299 MROH5Q6ZUA9 1318 aa19.71■□□□□ 0.75
COPS3-207ENST00000477299 APBB1O00213 710 aa19.7■□□□□ 0.74
COPS3-207ENST00000477299 IL15P40933 162 aaPredicted RBP19.7■□□□□ 0.74
COPS3-207ENST00000477299 KIAA2012Q0VF49 1180 aa19.7■□□□□ 0.74
COPS3-207ENST00000477299 GRIPAP1Q4V328 841 aa19.7■□□□□ 0.74
COPS3-207ENST00000477299 LEMD3Q9Y2U8 911 aa19.7■□□□□ 0.74
COPS3-207ENST00000477299 LARGE2Q8N3Y3 721 aa19.69■□□□□ 0.74
COPS3-207ENST00000477299 DBNDD1Q9H9R9 158 aa19.69■□□□□ 0.74
COPS3-207ENST00000477299 CEP126Q9P2H0 1117 aa19.69■□□□□ 0.74
COPS3-207ENST00000477299 FBXO3Q9UK99 471 aa19.69■□□□□ 0.74
COPS3-207ENST00000477299 FGFR2P21802 821 aa19.68■□□□□ 0.74
COPS3-207ENST00000477299 KCNJ4P48050 445 aa19.68■□□□□ 0.74
COPS3-207ENST00000477299 TIMM10P62072 90 aa19.68■□□□□ 0.74
COPS3-207ENST00000477299 SUPT20HQ8NEM7 779 aa19.68■□□□□ 0.74
COPS3-207ENST00000477299 ZC3H12CQ9C0D7 883 aaKnown RBP19.68■□□□□ 0.74
COPS3-207ENST00000477299 YDJCA8MPS7 323 aa19.67■□□□□ 0.74
COPS3-207ENST00000477299 IGHDP01880 384 aa19.67■□□□□ 0.74
COPS3-207ENST00000477299 ADORA1P30542 326 aa19.67■□□□□ 0.74
COPS3-207ENST00000477299 GYG1P46976 350 aa19.67■□□□□ 0.74
COPS3-207ENST00000477299 OS9Q13438 667 aaPredicted RBP19.67■□□□□ 0.74
COPS3-207ENST00000477299 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
COPS3-207ENST00000477299 HMMRO75330 724 aa19.66■□□□□ 0.74
COPS3-207ENST00000477299 UBE4AQ14139 1066 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms