RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF280DQ6N043 979 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 MAMSTRQ6ZN01 415 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 ZBTB33Q86T24 672 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 CNPY4Q8N129 248 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 CPLX3Q8WVH0 158 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 NGLY1Q96IV0 654 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 CSRNP1Q96S65 589 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 TMX4Q9H1E5 349 aaPredicted RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 ARNT2Q9HBZ2 717 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 TMEM260Q9NX78 707 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 ATP8A1Q9Y2Q0 1164 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 THRAP3Q9Y2W1 955 aaKnown RBP3.67□□□□□ -1.82
HMGN4-202ENST00000477243 RPS6KL1Q9Y6S9 549 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 SYNJ1O43426 1573 aa3.67□□□□□ -1.82
HMGN4-202ENST00000477243 ESYT3A0FGR9 886 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ANP32CO43423 234 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 TSPAN6O43657 245 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 LGR5O75473 907 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ALDH1L1O75891 902 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 FGAP02671 866 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 NEFMP07197 916 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 PTPREP23469 700 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 CNGA1P29973 690 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 CTHP32929 405 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ETFBP38117 255 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 NASPP49321 788 aaPredicted RBP3.66□□□□□ -1.82
HMGN4-202ENST00000477243 CLCN6P51797 869 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 PTPRNQ16849 979 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 TNNI3KQ59H18 835 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ERMP1Q7Z2K6 904 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 KIAA0825Q8IV33 1275 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 CACTIN-AS1Q8N1I8 211 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGN4-202ENST00000477243 TTC16Q8NEE8 873 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ADAM32Q8TC27 787 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 SCG3Q8WXD2 468 aaKnown RBP3.66□□□□□ -1.82
HMGN4-202ENST00000477243 DNAJC7Q99615 494 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 ARHGAP9Q9BRR9 750 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 PAGR1Q9BTK6 254 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 SPON2Q9BUD6 331 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 SRCIN1Q9C0H9 1055 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 CASS4Q9NQ75 786 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 CNTN3Q9P232 1028 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 FAM8A1Q9UBU6 413 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 PLAAQ9Y263 795 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 SZT2Q5T011 3432 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 TEX14Q8IWB6 1497 aa3.66□□□□□ -1.82
HMGN4-202ENST00000477243 FAM221BA6H8Z2 402 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 GOLGA6CA6NDK9 693 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 GOLGA6BA6NDN3 693 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 NRDCO43847 1150 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 ZNF500O60304 480 aaPredicted RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 MYCP01106 439 aaPredicted RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 RPLP1P05386 114 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 GOLGA6DP0CG33 693 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 COL6A1P12109 1028 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 COPB2P35606 906 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 LMOD3Q0VAK6 560 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 KMT5BQ4FZB7 885 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 BRDTQ58F21 947 aaPredicted RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 PPP4R3BQ5MIZ7 849 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 SWT1Q5T5J6 900 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 MEX3CQ5U5Q3 659 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 C3orf67Q6ZVT6 689 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 GJD3Q8N144 294 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 STK11IPQ8N1F8 1099 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 PGBD3Q8N328 593 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 LILRB2Q8N423 598 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 TSR2Q969E8 191 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 KCNH8Q96L42 1107 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 CEP63Q96MT8 703 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 PURBQ96QR8 312 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 SETDB2Q96T68 719 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 USB1Q9BQ65 265 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 SRRTQ9BXP5 876 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 ESF1Q9H501 851 aaKnown RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 BCL2L12Q9HB09 334 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 GOLGA6AQ9NYA3 693 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 PRKAG3Q9UGI9 489 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 MCM8Q9UJA3 840 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 SALL2Q9Y467 1007 aaPredicted RBP3.65□□□□□ -1.83
HMGN4-202ENST00000477243 EP400Q96L91 3159 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 DCAF1Q9Y4B6 1507 aa3.65□□□□□ -1.83
HMGN4-202ENST00000477243 TDRD9Q8NDG6 1382 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 C3orf80F5H4A9 247 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 EIF1AYO14602 144 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 CFHP08603 1231 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 SOX9P48436 509 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 POU5F1Q01860 360 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MORC3Q14149 939 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MYBPC2Q14324 1141 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 NBPF20Q3BBV1 942 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 SYCP2LQ5T4T6 812 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 L1TD1Q5T7N2 865 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 CCDC174Q6PII3 467 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 RELL1Q8IUW5 271 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MYO1HQ8N1T3 1032 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 STAG2Q8N3U4 1231 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 PDILTQ8N807 584 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 THAP3Q8WTV1 239 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms