RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 MAP4K1Q92918 833 aa16.01■□□□□ 0.15
HDAC7-221ENST00000477203 IQSEC3Q9UPP2 1182 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-221ENST00000477203 SUSD4Q5VX71 490 aa16.01■□□□□ 0.15
HDAC7-221ENST00000477203 CWC22Q9HCG8 908 aaKnown RBP16.01■□□□□ 0.15
HDAC7-221ENST00000477203 LIMCH1Q9UPQ0 1083 aa16.01■□□□□ 0.15
HDAC7-221ENST00000477203 NIP7Q9Y221 180 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC7-221ENST00000477203 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-221ENST00000477203 ZNF609O15014 1411 aa16.01■□□□□ 0.15
HDAC7-221ENST00000477203 TTLL5Q6EMB2 1281 aa16.01■□□□□ 0.15
HDAC7-221ENST00000477203 DISP2A7MBM2 1401 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 TTC14Q96N46 770 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 CCDC87Q9NVE4 849 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 NSFL1CQ9UNZ2 370 aaKnown RBP16■□□□□ 0.15
HDAC7-221ENST00000477203 SMC3Q9UQE7 1217 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 PHLPP1O60346 1717 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 TCHHQ07283 1943 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 VPS37CA5D8V6 355 aaPredicted RBP16■□□□□ 0.15
HDAC7-221ENST00000477203 HIP1O00291 1037 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 ZAP70P43403 619 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 MCM2P49736 904 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 INTS5Q6P9B9 1019 aaKnown RBP16■□□□□ 0.15
HDAC7-221ENST00000477203 BLOC1S2Q6QNY1 142 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 FERMT3Q86UX7 667 aa16■□□□□ 0.15
HDAC7-221ENST00000477203 CTSWP56202 376 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 ME3Q16798 604 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 CCDC158Q5M9N0 1113 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 TPCN1Q9ULQ1 816 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 SPATA31A5Q5VU36 1347 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 SPATA31A7Q8IWB4 1347 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
HDAC7-221ENST00000477203 ANKRD18BA2A2Z9 1011 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
HDAC7-221ENST00000477203 ATP2B3Q16720 1220 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 KBTBD3Q8NAB2 608 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 MCMDC2Q4G0Z9 681 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
HDAC7-221ENST00000477203 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
HDAC7-221ENST00000477203 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-221ENST00000477203 CYP2E1P05181 493 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-221ENST00000477203 CUL4AQ13619 759 aa15.98■□□□□ 0.15
HDAC7-221ENST00000477203 RAB11FIP4Q86YS3 637 aa15.98■□□□□ 0.15
HDAC7-221ENST00000477203 NUP188Q5SRE5 1749 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 ESPNB1AK53 854 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 IDH1O75874 414 aaKnown RBP15.97■□□□□ 0.15
HDAC7-221ENST00000477203 GJB2P29033 226 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 RNF20Q5VTR2 975 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 PALLDQ8WX93 1383 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 CYP21A2P08686 494 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 FAM173BQ6P4H8 233 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 TJP1Q07157 1748 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-221ENST00000477203 IL6STP40189 918 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-221ENST00000477203 DDX11Q96FC9 970 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 LMBRD1Q9NUN5 540 aa15.97■□□□□ 0.15
HDAC7-221ENST00000477203 DOT1LQ8TEK3 1739 aa15.96■□□□□ 0.15
HDAC7-221ENST00000477203 M0R2C6 588 aa15.96■□□□□ 0.15
HDAC7-221ENST00000477203 EIF5P55010 431 aaKnown RBP15.96■□□□□ 0.15
HDAC7-221ENST00000477203 MEX3CQ5U5Q3 659 aaKnown RBP15.96■□□□□ 0.15
HDAC7-221ENST00000477203 FAM13BQ9NYF5 915 aa15.96■□□□□ 0.15
HDAC7-221ENST00000477203 OSBP2Q969R2 916 aa15.96■□□□□ 0.14
HDAC7-221ENST00000477203 KDM4AO75164 1064 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 PHF14O94880 888 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 SYT1P21579 422 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 PHKA1P46020 1223 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 ZHX1Q9UKY1 873 aaPredicted RBP15.95■□□□□ 0.14
HDAC7-221ENST00000477203 MED23Q9ULK4 1368 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 FIBPO43427 364 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 TRIM28Q13263 835 aaKnown RBP15.95■□□□□ 0.14
HDAC7-221ENST00000477203 PRDM10Q9NQV6 1147 aa15.95■□□□□ 0.14
HDAC7-221ENST00000477203 GADD45BO75293 160 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-221ENST00000477203 ST3GAL1Q11201 340 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 GPT2Q8TD30 523 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 SRP68Q9UHB9 627 aaKnown RBP15.94■□□□□ 0.14
HDAC7-221ENST00000477203 USP21Q9UK80 565 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 PDE8AO60658 829 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 BRD1O95696 1058 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 APPP05067 770 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 CSF1RP07333 972 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 STOX1Q6ZVD7 989 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 CNPY2Q9Y2B0 182 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 MYH14Q7Z406 1995 aaKnown RBP15.94■□□□□ 0.14
HDAC7-221ENST00000477203 MAST3O60307 1309 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 MCAMP43121 646 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 Q6ZUG5 572 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 LINC00116Q8NCU8 138 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 BRF1Q92994 677 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 PDCL3Q9H2J4 239 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 GPHNQ9NQX3 736 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-221ENST00000477203 RIPOR2Q9Y4F9 1068 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 PLEKHG2Q9H7P9 1386 aa15.94■□□□□ 0.14
HDAC7-221ENST00000477203 NPHP1O15259 732 aa15.93■□□□□ 0.14
HDAC7-221ENST00000477203 CCT2P78371 535 aaKnown RBP15.93■□□□□ 0.14
HDAC7-221ENST00000477203 NEK1Q96PY6 1258 aa15.93■□□□□ 0.14
HDAC7-221ENST00000477203 UTP14AQ9BVJ6 771 aaKnown RBP15.93■□□□□ 0.14
HDAC7-221ENST00000477203 PUS7LQ9H0K6 701 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms