RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 COL4A1P02462 1669 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 MYH7P12883 1935 aa16.74■□□□□ 0.27
TRAF4-210ENST00000475329 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
TRAF4-210ENST00000475329 MAP4K4O95819 1239 aaPredicted RBP16.73■□□□□ 0.27
TRAF4-210ENST00000475329 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
TRAF4-210ENST00000475329 NLRP3Q96P20 1036 aa16.73■□□□□ 0.27
TRAF4-210ENST00000475329 ANKRD31Q8N7Z5 1873 aa16.72■□□□□ 0.27
TRAF4-210ENST00000475329 C3orf67Q6ZVT6 689 aa16.72■□□□□ 0.27
TRAF4-210ENST00000475329 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
TRAF4-210ENST00000475329 EVI5LQ96CN4 794 aa16.72■□□□□ 0.27
TRAF4-210ENST00000475329 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
TRAF4-210ENST00000475329 AKAP11Q9UKA4 1901 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 CHMLP26374 656 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 TIMM10P62072 90 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 ANKRD18AQ8IVF6 992 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 DDRGK1Q96HY6 314 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 CAMKK2Q96RR4 588 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 BOLA2Q9H3K6 86 aa16.71■□□□□ 0.27
TRAF4-210ENST00000475329 MSH5O43196 834 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 REC8O95072 547 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 TM4SF1P30408 202 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 BAG6P46379 1132 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 ST5P78524 1137 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 EN1Q05925 392 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-210ENST00000475329 EZH2Q15910 746 aaKnown RBP16.7■□□□□ 0.26
TRAF4-210ENST00000475329 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
TRAF4-210ENST00000475329 ESYT1Q9BSJ8 1104 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
TRAF4-210ENST00000475329 RFX7Q2KHR2 1363 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 MYH13Q9UKX3 1938 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 PDE8BO95263 885 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 SERPINB2P05120 415 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 PUM3Q15397 648 aaKnown RBP16.69■□□□□ 0.26
TRAF4-210ENST00000475329 GORABQ5T7V8 394 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 XAGE2Q96GT9 111 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 HAUS7Q99871 368 aa16.69■□□□□ 0.26
TRAF4-210ENST00000475329 HIP1O00291 1037 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 ADORA1P30542 326 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 TTC39AQ5SRH9 613 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 NLGN1Q8N2Q7 840 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 CCDC24Q8N4L8 307 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRAF4-210ENST00000475329 DIAPH3Q9NSV4 1193 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 STK32BQ9NY57 414 aa16.68■□□□□ 0.26
TRAF4-210ENST00000475329 POLRMTO00411 1230 aaKnown RBP16.67■□□□□ 0.26
TRAF4-210ENST00000475329 SLC5A1P13866 664 aa16.67■□□□□ 0.26
TRAF4-210ENST00000475329 RBM25P49756 843 aaKnown RBP16.67■□□□□ 0.26
TRAF4-210ENST00000475329 DDR1Q08345 913 aa16.67■□□□□ 0.26
TRAF4-210ENST00000475329 LPIN2Q92539 896 aa16.67■□□□□ 0.26
TRAF4-210ENST00000475329 DNAJC2Q99543 621 aaKnown RBP16.67■□□□□ 0.26
TRAF4-210ENST00000475329 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
TRAF4-210ENST00000475329 IFIT1P09914 478 aaKnown RBP16.66■□□□□ 0.26
TRAF4-210ENST00000475329 FGFR2P21802 821 aa16.66■□□□□ 0.26
TRAF4-210ENST00000475329 DDX46Q7L014 1031 aaKnown RBP16.66■□□□□ 0.26
TRAF4-210ENST00000475329 RUFY2Q8WXA3 655 aa16.66■□□□□ 0.26
TRAF4-210ENST00000475329 IPO9Q96P70 1041 aaKnown RBP16.66■□□□□ 0.26
TRAF4-210ENST00000475329 BSDC1Q9NW68 430 aaPredicted RBP16.66■□□□□ 0.26
TRAF4-210ENST00000475329 DOCK2Q92608 1830 aa16.66■□□□□ 0.26
TRAF4-210ENST00000475329 LRRC37AA6NMS7 1700 aa16.65■□□□□ 0.26
TRAF4-210ENST00000475329 CHRNDQ07001 517 aa16.65■□□□□ 0.26
TRAF4-210ENST00000475329 SLC15A2Q16348 729 aa16.65■□□□□ 0.26
TRAF4-210ENST00000475329 HELBQ8NG08 1087 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-210ENST00000475329 CELF1Q92879 486 aaKnown RBP16.65■□□□□ 0.26
TRAF4-210ENST00000475329 ANO8Q9HCE9 1232 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-210ENST00000475329 MYO5AQ9Y4I1 1855 aaKnown RBP16.65■□□□□ 0.26
TRAF4-210ENST00000475329 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
TRAF4-210ENST00000475329 RPS8P62241 208 aaKnown RBP16.64■□□□□ 0.25
TRAF4-210ENST00000475329 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
TRAF4-210ENST00000475329 USP26Q9BXU7 913 aa16.64■□□□□ 0.25
TRAF4-210ENST00000475329 PAG1Q9NWQ8 432 aa16.64■□□□□ 0.25
TRAF4-210ENST00000475329 CACNA1SQ13698 1873 aa16.64■□□□□ 0.25
TRAF4-210ENST00000475329 SGSM2O43147 1006 aa16.63■□□□□ 0.25
TRAF4-210ENST00000475329 TAF5LO75529 589 aa16.63■□□□□ 0.25
TRAF4-210ENST00000475329 TICAM2Q86XR7 235 aa16.63■□□□□ 0.25
TRAF4-210ENST00000475329 EDC3Q96F86 508 aaKnown RBP16.63■□□□□ 0.25
TRAF4-210ENST00000475329 ZNF512BQ96KM6 892 aaPredicted RBP16.63■□□□□ 0.25
TRAF4-210ENST00000475329 RAD50Q92878 1312 aa16.63■□□□□ 0.25
TRAF4-210ENST00000475329 GOLIM4O00461 696 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 EPB41L2O43491 1005 aaKnown RBP16.62■□□□□ 0.25
TRAF4-210ENST00000475329 UQCRFS1P1P0C7P4 283 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 GRAPQ13588 217 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 CRY2Q49AN0 593 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
TRAF4-210ENST00000475329 KBTBD3Q8NAB2 608 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 GRAPLQ8TC17 118 aaPredicted RBP16.62■□□□□ 0.25
TRAF4-210ENST00000475329 ANO2Q9NQ90 1003 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 PARP3Q9Y6F1 533 aa16.62■□□□□ 0.25
TRAF4-210ENST00000475329 ARID4AP29374 1257 aaPredicted RBP16.61■□□□□ 0.25
TRAF4-210ENST00000475329 DEFB132Q7Z7B7 95 aa16.61■□□□□ 0.25
TRAF4-210ENST00000475329 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
TRAF4-210ENST00000475329 ANKRD2Q9GZV1 360 aa16.61■□□□□ 0.25
TRAF4-210ENST00000475329 MINPP1Q9UNW1 487 aa16.61■□□□□ 0.25
TRAF4-210ENST00000475329 NDUFB9Q9Y6M9 179 aa16.61■□□□□ 0.25
TRAF4-210ENST00000475329 MMP10P09238 476 aa16.6■□□□□ 0.25
TRAF4-210ENST00000475329 MCCP23508 829 aa16.6■□□□□ 0.25
TRAF4-210ENST00000475329 PHKA1P46020 1223 aa16.6■□□□□ 0.25
TRAF4-210ENST00000475329 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms