RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FAM9BQ8IZU0 186 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 RNF217Q8TC41 542 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 SCG3Q8WXD2 468 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 ITFG2Q969R8 447 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 FAM161BQ96MY7 647 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 PAIP2Q9BPZ3 127 aaKnown RBP7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 C1QTNF2Q9BXJ5 285 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 PBRM1Q86U86 1689 aa7.31□□□□□ -1.24
ECHDC1-215ENST00000475319 TMEM229AB2RXF0 380 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 ANP32CO43423 234 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 VARSP26640 1264 aaKnown RBP7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 HS1BP3Q53T59 392 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 ANKRD23Q86SG2 305 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 ZSCAN30Q86W11 494 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 CCDC155Q8N6L0 562 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 DONSONQ9NYP3 566 aa7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 FEZ2Q9UHY8 353 aaPredicted RBP7.3□□□□□ -1.24
ECHDC1-215ENST00000475319 FHAD1B1AJZ9 1412 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 CDC14CA4D256 554 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 ZIC2O95409 532 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 STAU1O95793 577 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 ZNF853P0CG23 659 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 ZNF771Q7L3S4 317 aaPredicted RBP7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 ALYREFQ86V81 257 aaKnown RBP7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 TNS4Q8IZW8 715 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 LINC00528Q8N1L1 170 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 PIK3R5Q8WYR1 880 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 SAP130Q9H0E3 1048 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 KNSTRNQ9Y448 316 aa7.29□□□□□ -1.24
ECHDC1-215ENST00000475319 GRIN2AQ12879 1464 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 LDHBP07195 334 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 MSNP26038 577 aaKnown RBP7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 TNNT3P45378 269 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 MAPK8P45983 427 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 GTF2A1P52655 376 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 RAD51AP2Q09MP3 1159 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 CT47A1Q5JQC4 288 aaPredicted RBP7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 SASS6Q6UVJ0 657 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 TMEM87AQ8NBN3 555 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 SPATA32Q96LK8 384 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 RNF19AQ9NV58 838 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 CCDC87Q9NVE4 849 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 PARP2Q9UGN5 583 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 RAD50Q92878 1312 aa7.28□□□□□ -1.24
ECHDC1-215ENST00000475319 COBLO75128 1261 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 XPCQ01831 940 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 BECN1Q14457 450 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 DSC3Q14574 896 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 C16orf46Q6P387 395 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 TRMT44Q8IYL2 757 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 SLC26A8Q96RN1 970 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 KCTD15Q96SI1 283 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 TSPAN18Q96SJ8 248 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 MED4Q9NPJ6 270 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 CDV3Q9UKY7 258 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 ATAD2Q6PL18 1390 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 SCO2A0A1W2PP80 73 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 NEFHP12036 1026 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 LIG1P18858 919 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 EIF1AXP47813 144 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 SCNN1DP51172 638 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 CCDC173Q0VFZ6 552 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 DUSP9Q99956 384 aaKnown RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 TSPAN10Q9H1Z9 355 aaPredicted RBP7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
ECHDC1-215ENST00000475319 ABCA5Q8WWZ7 1642 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 FZD6O60353 706 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 PRPF40AO75400 957 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 TDO2P48775 406 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 GDF10P55107 478 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 PLCB3Q01970 1234 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 EHHADHQ08426 723 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 METTL16Q86W50 562 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 NT5DC4Q86YG4 428 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 MSL3Q8N5Y2 521 aaKnown RBP7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 ZNF513Q8N8E2 541 aaPredicted RBP7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 CHMP4CQ96CF2 233 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 CITED4Q96RK1 184 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 FEZ1Q99689 392 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 MRS2Q9HD23 443 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 POGKQ9P215 609 aa7.26□□□□□ -1.25
ECHDC1-215ENST00000475319 KRBA1A5PL33 1030 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 ERVH48-1M5A8F1 160 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 BACH1O14867 736 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 PPP1R12AO14974 1030 aaPredicted RBP7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 IGHA2P01877 340 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 ITGA6P23229 1130 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 MCM5P33992 734 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 EPHA4P54764 986 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 TRDNQ13061 729 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 ERICH3Q5RHP9 1530 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 SGSM3Q96HU1 749 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 SETDB2Q96T68 719 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 SERTAD1Q9UHV2 236 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 WWC3Q9ULE0 1092 aa7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 R3HCC1Q9Y3T6 440 aaKnown RBP7.25□□□□□ -1.25
ECHDC1-215ENST00000475319 CFAP65Q6ZU64 1925 aaKnown RBP7.24□□□□□ -1.25
ECHDC1-215ENST00000475319 NUP160Q12769 1436 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms