RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 BSDC1Q9NW68 430 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-223ENST00000475146 XDHP47989 1333 aa30.38■■■□□ 2.45
CPNE1-223ENST00000475146 LMOD1P29536 600 aaPredicted RBP30.37■■■□□ 2.45
CPNE1-223ENST00000475146 CXCL9Q07325 125 aa30.37■■■□□ 2.45
CPNE1-223ENST00000475146 EPHX2P34913 555 aa30.36■■■□□ 2.45
CPNE1-223ENST00000475146 FOXO4P98177 505 aa30.36■■■□□ 2.45
CPNE1-223ENST00000475146 DBNDD1Q9H9R9 158 aa30.36■■■□□ 2.45
CPNE1-223ENST00000475146 ANKRD18BA2A2Z9 1011 aa30.35■■■□□ 2.45
CPNE1-223ENST00000475146 RAD17O75943 681 aa30.35■■■□□ 2.45
CPNE1-223ENST00000475146 EAPPQ56P03 285 aaPredicted RBP30.35■■■□□ 2.45
CPNE1-223ENST00000475146 CIAPIN1Q6FI81 312 aa30.35■■■□□ 2.45
CPNE1-223ENST00000475146 MPHOSPH8Q99549 860 aa30.35■■■□□ 2.45
CPNE1-223ENST00000475146 ZC3H12CQ9C0D7 883 aaKnown RBP30.35■■■□□ 2.45
CPNE1-223ENST00000475146 POTEIP0CG38 1075 aa30.34■■■□□ 2.45
CPNE1-223ENST00000475146 POTEJP0CG39 1038 aa30.34■■■□□ 2.45
CPNE1-223ENST00000475146 IFIT5Q13325 482 aaKnown RBP30.34■■■□□ 2.45
CPNE1-223ENST00000475146 EPHA10Q5JZY3 1008 aa30.34■■■□□ 2.45
CPNE1-223ENST00000475146 MINPP1Q9UNW1 487 aa30.34■■■□□ 2.45
CPNE1-223ENST00000475146 YDJCA8MPS7 323 aa30.33■■■□□ 2.45
CPNE1-223ENST00000475146 ATP2B4P23634 1241 aa30.33■■■□□ 2.45
CPNE1-223ENST00000475146 RARSP54136 660 aaKnown RBP30.33■■■□□ 2.45
CPNE1-223ENST00000475146 DOK7Q18PE1 504 aa30.33■■■□□ 2.45
CPNE1-223ENST00000475146 LMBR1LQ6UX01 489 aa30.33■■■□□ 2.45
CPNE1-223ENST00000475146 NOB1Q9ULX3 412 aaKnown RBP30.33■■■□□ 2.45
CPNE1-223ENST00000475146 G3V3G9 751 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 ECE2O60344 883 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 SCNN1DP51172 638 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 APLP1P51693 650 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 TNIP1Q15025 636 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 DCAF8Q5TAQ9 597 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 CHADLQ6NUI6 762 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 LDHDQ86WU2 507 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 SUCLG2Q96I99 432 aa30.32■■■□□ 2.44
CPNE1-223ENST00000475146 NBPF7P0C2Y1 421 aaPredicted RBP30.31■■■□□ 2.44
CPNE1-223ENST00000475146 PNMA8AQ86V59 439 aaPredicted RBP30.3■■■□□ 2.44
CPNE1-223ENST00000475146 UTYO14607 1347 aa30.29■■■□□ 2.44
CPNE1-223ENST00000475146 EPS15P42566 896 aa30.29■■■□□ 2.44
CPNE1-223ENST00000475146 GMPSP49915 693 aaPredicted RBP30.29■■■□□ 2.44
CPNE1-223ENST00000475146 BRPF1P55201 1214 aaPredicted RBP30.29■■■□□ 2.44
CPNE1-223ENST00000475146 CCDC57Q2TAC2 916 aa30.29■■■□□ 2.44
CPNE1-223ENST00000475146 CLEC11AQ9Y240 323 aa30.29■■■□□ 2.44
CPNE1-223ENST00000475146 TAF7LQ5H9L4 462 aa30.28■■■□□ 2.44
CPNE1-223ENST00000475146 API5Q9BZZ5 524 aaKnown RBP30.28■■■□□ 2.44
CPNE1-223ENST00000475146 KIF16BQ96L93 1317 aa30.27■■■□□ 2.44
CPNE1-223ENST00000475146 CCT4P50991 539 aaKnown RBP30.27■■■□□ 2.44
CPNE1-223ENST00000475146 ANKRD2Q9GZV1 360 aa30.27■■■□□ 2.44
CPNE1-223ENST00000475146 GPRC5DQ9NZD1 345 aa30.27■■■□□ 2.44
CPNE1-223ENST00000475146 ZBED9Q6R2W3 1325 aa30.25■■■□□ 2.43
CPNE1-223ENST00000475146 PSMD14O00487 310 aa30.25■■■□□ 2.43
CPNE1-223ENST00000475146 KAZALD1Q96I82 304 aa30.25■■■□□ 2.43
CPNE1-223ENST00000475146 WTIPA6NIX2 430 aaPredicted RBP30.24■■■□□ 2.43
CPNE1-223ENST00000475146 CHRNDQ07001 517 aa30.24■■■□□ 2.43
CPNE1-223ENST00000475146 ZNF594Q96JF6 807 aaPredicted RBP30.24■■■□□ 2.43
CPNE1-223ENST00000475146 BICC1Q9H694 974 aaKnown RBP30.24■■■□□ 2.43
CPNE1-223ENST00000475146 LEMD3Q9Y2U8 911 aa30.24■■■□□ 2.43
CPNE1-223ENST00000475146 MED23Q9ULK4 1368 aa30.24■■■□□ 2.43
CPNE1-223ENST00000475146 KCNJ4P48050 445 aa30.23■■■□□ 2.43
CPNE1-223ENST00000475146 USP44Q9H0E7 712 aa30.23■■■□□ 2.43
CPNE1-223ENST00000475146 KCNQ5Q9NR82 932 aa30.23■■■□□ 2.43
CPNE1-223ENST00000475146 ZBTB12Q9Y330 459 aaPredicted RBP30.23■■■□□ 2.43
CPNE1-223ENST00000475146 ADARB2Q9NS39 739 aaKnown RBP30.22■■■□□ 2.43
CPNE1-223ENST00000475146 ADAMTSL1Q8N6G6 1762 aa30.22■■■□□ 2.43
CPNE1-223ENST00000475146 ZNF804BA4D1E1 1349 aa30.22■■■□□ 2.43
CPNE1-223ENST00000475146 HTRA3P83110 453 aa30.21■■■□□ 2.43
CPNE1-223ENST00000475146 USP50Q70EL3 339 aaPredicted RBP30.21■■■□□ 2.43
CPNE1-223ENST00000475146 CNNM1Q9NRU3 951 aa30.21■■■□□ 2.43
CPNE1-223ENST00000475146 LDHAL6AQ6ZMR3 332 aa30.2■■■□□ 2.43
CPNE1-223ENST00000475146 RABL6Q3YEC7 729 aaPredicted RBP30.19■■■□□ 2.42
CPNE1-223ENST00000475146 MAP1SQ66K74 1059 aaPredicted RBP30.19■■■□□ 2.42
CPNE1-223ENST00000475146 ANKRD44Q8N8A2 993 aa30.19■■■□□ 2.42
CPNE1-223ENST00000475146 HELBQ8NG08 1087 aaPredicted RBP30.19■■■□□ 2.42
CPNE1-223ENST00000475146 ARHGAP45Q92619 1136 aa30.19■■■□□ 2.42
CPNE1-223ENST00000475146 CNOT7Q9UIV1 285 aaKnown RBP30.19■■■□□ 2.42
CPNE1-223ENST00000475146 SCN9AQ15858 1988 aa30.19■■■□□ 2.42
CPNE1-223ENST00000475146 BCAR3O75815 825 aa30.18■■■□□ 2.42
CPNE1-223ENST00000475146 MICALL2Q8IY33 904 aa30.18■■■□□ 2.42
CPNE1-223ENST00000475146 FRAT1Q92837 279 aaPredicted RBP30.18■■■□□ 2.42
CPNE1-223ENST00000475146 H7C1D1 291 aa30.17■■■□□ 2.42
CPNE1-223ENST00000475146 IPO8O15397 1037 aaKnown RBP30.17■■■□□ 2.42
CPNE1-223ENST00000475146 TAF5LO75529 589 aa30.17■■■□□ 2.42
CPNE1-223ENST00000475146 SHTN1A0MZ66 631 aa30.16■■■□□ 2.42
CPNE1-223ENST00000475146 UBTFL1P0CB47 393 aaPredicted RBP30.16■■■□□ 2.42
CPNE1-223ENST00000475146 RPS12P25398 132 aaKnown RBP30.16■■■□□ 2.42
CPNE1-223ENST00000475146 KLRK1P26718 216 aa30.16■■■□□ 2.42
CPNE1-223ENST00000475146 PODNQ7Z5L7 613 aa30.16■■■□□ 2.42
CPNE1-223ENST00000475146 TXNRD3Q86VQ6 643 aa30.16■■■□□ 2.42
CPNE1-223ENST00000475146 CNTROBQ8N137 903 aa30.16■■■□□ 2.42
CPNE1-223ENST00000475146 DPF2Q92785 391 aa30.16■■■□□ 2.42
CPNE1-223ENST00000475146 PLIN1O60240 522 aa30.15■■■□□ 2.42
CPNE1-223ENST00000475146 VIL1P09327 827 aaKnown RBP30.15■■■□□ 2.42
CPNE1-223ENST00000475146 COA1Q9GZY4 146 aa30.15■■■□□ 2.42
CPNE1-223ENST00000475146 A0A1B0GUL6 1792 aa30.15■■■□□ 2.42
CPNE1-223ENST00000475146 SNAP23O00161 211 aa30.14■■■□□ 2.42
CPNE1-223ENST00000475146 USP17L3A6NCW0 530 aa30.13■■■□□ 2.41
CPNE1-223ENST00000475146 USP17L4A6NCW7 530 aa30.13■■■□□ 2.41
CPNE1-223ENST00000475146 USP17L1Q7RTZ2 530 aa30.13■■■□□ 2.41
CPNE1-223ENST00000475146 TRPM4Q8TD43 1214 aa30.13■■■□□ 2.41
CPNE1-223ENST00000475146 FBXW7Q969H0 707 aa30.13■■■□□ 2.41
CPNE1-223ENST00000475146 PASKQ96RG2 1323 aa30.13■■■□□ 2.41
CPNE1-223ENST00000475146 ITGBL1O95965 494 aaPredicted RBP30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms