RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 DOK7Q18PE1 504 aa23.51■■□□□ 1.35
DNMT3A-210ENST00000474807 MYH16Q9H6N6 1097 aa23.51■■□□□ 1.35
DNMT3A-210ENST00000474807 ANKIB1Q9P2G1 1089 aa23.51■■□□□ 1.35
DNMT3A-210ENST00000474807 PSMD14O00487 310 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 UBE3BQ7Z3V4 1068 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 LINS1Q8NG48 757 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 CDC5LQ99459 802 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 ZC3H12CQ9C0D7 883 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 GREM2Q9H772 168 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 KCNQ5Q9NR82 932 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 PGAP2Q9UHJ9 254 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 CNOT7Q9UIV1 285 aaKnown RBP23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 GGA1Q9UJY5 639 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 ZBTB12Q9Y330 459 aaPredicted RBP23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 RTL9Q8NET4 1388 aa23.5■■□□□ 1.35
DNMT3A-210ENST00000474807 UFL1O94874 794 aa23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 HSPA1AP0DMV8 641 aaKnown RBP23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 HSPA1BP0DMV9 641 aaKnown RBP23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 HIRAP54198 1017 aaPredicted RBP23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 CASP7P55210 303 aa23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 FMR1Q06787 632 aaKnown RBP eCLIP23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 DPF2Q92785 391 aa23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 PLA2G12BQ9BX93 195 aa23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 ZNF521Q96K83 1311 aa23.49■■□□□ 1.35
DNMT3A-210ENST00000474807 SHTN1A0MZ66 631 aa23.48■■□□□ 1.35
DNMT3A-210ENST00000474807 RASSF10A6NK89 507 aa23.48■■□□□ 1.35
DNMT3A-210ENST00000474807 XDHP47989 1333 aa23.48■■□□□ 1.35
DNMT3A-210ENST00000474807 TRAF5O00463 557 aa23.47■■□□□ 1.35
DNMT3A-210ENST00000474807 VEGFBP49765 207 aa23.47■■□□□ 1.35
DNMT3A-210ENST00000474807 MICALL2Q8IY33 904 aa23.47■■□□□ 1.35
DNMT3A-210ENST00000474807 TRPM4Q8TD43 1214 aa23.47■■□□□ 1.35
DNMT3A-210ENST00000474807 ZC3H15Q8WU90 426 aaKnown RBP23.47■■□□□ 1.35
DNMT3A-210ENST00000474807 BSDC1Q9NW68 430 aaPredicted RBP23.47■■□□□ 1.35
DNMT3A-210ENST00000474807 H7C1D1 291 aa23.46■■□□□ 1.35
DNMT3A-210ENST00000474807 SCN9AQ15858 1988 aa23.46■■□□□ 1.35
DNMT3A-210ENST00000474807 ATP2B4P23634 1241 aa23.45■■□□□ 1.34
DNMT3A-210ENST00000474807 RPS12P25398 132 aaKnown RBP23.45■■□□□ 1.34
DNMT3A-210ENST00000474807 CST9Q5W186 159 aa23.45■■□□□ 1.34
DNMT3A-210ENST00000474807 MINPP1Q9UNW1 487 aa23.45■■□□□ 1.34
DNMT3A-210ENST00000474807 F6X3S4 739 aa23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 CSF1RP07333 972 aa23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 VIL1P09327 827 aaKnown RBP23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 DEFB115Q30KQ5 88 aa23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 BEND3Q5T5X7 828 aa23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 COL13A1Q5TAT6 717 aaPredicted RBP23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 TRPM7Q96QT4 1865 aa23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 SPEF2Q9C093 1822 aa23.44■■□□□ 1.34
DNMT3A-210ENST00000474807 WTIPA6NIX2 430 aaPredicted RBP23.43■■□□□ 1.34
DNMT3A-210ENST00000474807 SAMD7Q7Z3H4 446 aa23.43■■□□□ 1.34
DNMT3A-210ENST00000474807 GLIS2Q9BZE0 524 aaPredicted RBP23.43■■□□□ 1.34
DNMT3A-210ENST00000474807 ABT1Q9ULW3 272 aaKnown RBP23.43■■□□□ 1.34
DNMT3A-210ENST00000474807 G3V3G9 751 aa23.42■■□□□ 1.34
DNMT3A-210ENST00000474807 ITGA6P23229 1130 aa23.42■■□□□ 1.34
DNMT3A-210ENST00000474807 DCAF8Q5TAQ9 597 aa23.42■■□□□ 1.34
DNMT3A-210ENST00000474807 EGFRP00533 1210 aa23.41■■□□□ 1.34
DNMT3A-210ENST00000474807 FAM161AQ3B820 660 aa23.41■■□□□ 1.34
DNMT3A-210ENST00000474807 IGHMBP2P38935 993 aaKnown RBP23.4■■□□□ 1.34
DNMT3A-210ENST00000474807 CCT4P50991 539 aaKnown RBP23.4■■□□□ 1.34
DNMT3A-210ENST00000474807 CDC37L1Q7L3B6 337 aa23.4■■□□□ 1.34
DNMT3A-210ENST00000474807 ZNF609O15014 1411 aa23.4■■□□□ 1.34
DNMT3A-210ENST00000474807 PSME4Q14997 1843 aa23.4■■□□□ 1.34
DNMT3A-210ENST00000474807 MED23Q9ULK4 1368 aa23.4■■□□□ 1.34
DNMT3A-210ENST00000474807 TBC1D10BQ4KMP7 808 aaPredicted RBP23.39■■□□□ 1.33
DNMT3A-210ENST00000474807 PODNQ7Z5L7 613 aa23.39■■□□□ 1.33
DNMT3A-210ENST00000474807 TLL2Q9Y6L7 1015 aa23.39■■□□□ 1.33
DNMT3A-210ENST00000474807 WDR33Q9C0J8 1336 aaKnown RBP23.38■■□□□ 1.33
DNMT3A-210ENST00000474807 FOXO4P98177 505 aa23.38■■□□□ 1.33
DNMT3A-210ENST00000474807 RSBN1LQ6PCB5 846 aaPredicted RBP23.38■■□□□ 1.33
DNMT3A-210ENST00000474807 CELF2O95319 508 aaKnown RBP23.37■■□□□ 1.33
DNMT3A-210ENST00000474807 AGBL3Q8NEM8 1001 aa23.37■■□□□ 1.33
DNMT3A-210ENST00000474807 MPHOSPH8Q99549 860 aa23.37■■□□□ 1.33
DNMT3A-210ENST00000474807 LEMD3Q9Y2U8 911 aa23.37■■□□□ 1.33
DNMT3A-210ENST00000474807 RBM26Q5T8P6 1007 aaKnown RBP23.36■■□□□ 1.33
DNMT3A-210ENST00000474807 ANKRD18BA2A2Z9 1011 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 GRM8O00222 908 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 ZNF280AP59817 542 aaPredicted RBP23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 SAPCD2Q86UD0 394 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 USP48Q86UV5 1035 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 GMLQ99445 158 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 ANKRD2Q9GZV1 360 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 WBP1LQ9NX94 342 aa23.35■■□□□ 1.33
DNMT3A-210ENST00000474807 USP17L3A6NCW0 530 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 USP17L4A6NCW7 530 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 E9PSI1 815 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 FOXN1O15353 648 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 KIF4BQ2VIQ3 1234 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 USP17L1Q7RTZ2 530 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 TXNRD3Q86VQ6 643 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 CAPNS2Q96L46 248 aa23.34■■□□□ 1.33
DNMT3A-210ENST00000474807 ZNF804BA4D1E1 1349 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 ALDH1L1O75891 902 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 CHRNDQ07001 517 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 EPHA10Q5JZY3 1008 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 CYP4F22Q6NT55 531 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 SLC4A10Q6U841 1118 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 DLK2Q6UY11 383 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 COA1Q9GZY4 146 aa23.33■■□□□ 1.33
DNMT3A-210ENST00000474807 THSD7BQ9C0I4 1608 aa23.33■■□□□ 1.32
DNMT3A-210ENST00000474807 ZNF646O15015 1829 aaPredicted RBP23.32■■□□□ 1.32
DNMT3A-210ENST00000474807 ECE1P42892 770 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms