RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TMC4Q7Z404 712 aa12.56□□□□□ -0.4
PRPF38A-202ENST00000474048 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
PRPF38A-202ENST00000474048 GRAPLQ8TC17 118 aaPredicted RBP12.56□□□□□ -0.4
PRPF38A-202ENST00000474048 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
PRPF38A-202ENST00000474048 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
PRPF38A-202ENST00000474048 GPR108Q9NPR9 543 aa12.56□□□□□ -0.4
PRPF38A-202ENST00000474048 TRIM6-TRIM34B2RNG4 842 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 H0YIN7 160 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 NPR1P16066 1061 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 ALDH1B1P30837 517 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 PDE1AP54750 535 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 CCDC158Q5M9N0 1113 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 ATG9AQ7Z3C6 839 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 PLEKHM2Q8IWE5 1019 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 PUS3Q9BZE2 481 aaKnown RBP12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 CCDC8Q9H0W5 538 aaPredicted RBP12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 ECHDC1Q9NTX5 307 aa12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 BSDC1Q9NW68 430 aaPredicted RBP12.55□□□□□ -0.4
PRPF38A-202ENST00000474048 ZNF609O15014 1411 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 A0A1B0GUL7 405 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 BMP2KLQ5H9B9 411 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 TTC39AQ5SRH9 613 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 TTC22Q5TAA0 569 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 C16orf71Q8IYS4 520 aaPredicted RBP12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 ZNF622Q969S3 477 aaKnown RBP eCLIP12.54□□□□□ -0.41e-8■■□□□ 12.7
PRPF38A-202ENST00000474048 ANKIB1Q9P2G1 1089 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 AK9Q5TCS8 1911 aa12.54□□□□□ -0.4
PRPF38A-202ENST00000474048 ANKRD31Q8N7Z5 1873 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 BBOX1O75936 387 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 PDE8BO95263 885 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 CHRNDQ07001 517 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 C3orf67Q6ZVT6 689 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 C2CD5Q86YS7 1000 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 CNTROBQ8N137 903 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 LPIN2Q92539 896 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 RILPL2Q969X0 211 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 MASTLQ96GX5 879 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 CRAMP1Q96RY5 1269 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 OSBPL3Q9H4L5 887 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 UPF2Q9HAU5 1272 aaKnown RBP12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
PRPF38A-202ENST00000474048 PSDA5PKW4 1024 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 CAVIN4Q5BKX8 364 aa12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 OTUD7AQ8TE49 926 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 CELF1Q92879 486 aaKnown RBP12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 EAF2Q96CJ1 260 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 STAP2Q9UGK3 403 aa12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 CACNA1SQ13698 1873 aa12.52□□□□□ -0.41
PRPF38A-202ENST00000474048 TAF1P21675 1872 aa12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 LRRFIP1Q32MZ4 808 aaKnown RBP12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 STYK1Q6J9G0 422 aa12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 HELBQ8NG08 1087 aaPredicted RBP12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 CNKSR1Q969H4 720 aa12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 GNL3LQ9NVN8 582 aaKnown RBP12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 PPP1R1BQ9UD71 204 aaPredicted RBP12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 ARAP2Q8WZ64 1704 aa12.51□□□□□ -0.41
PRPF38A-202ENST00000474048 CDC45O75419 566 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 UQCRFS1P1P0C7P4 283 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 SRGNP10124 158 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 HOXA10P31260 410 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 TIMM10P62072 90 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 UBE4AQ14139 1066 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 TSHZ3Q63HK5 1081 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 XAGE2Q96GT9 111 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 PDGFDQ9GZP0 370 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 MINPP1Q9UNW1 487 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 XDHP47989 1333 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 C10orf71Q711Q0 1435 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 COL11A2P13942 1736 aaPredicted RBP12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 A0A1B0GUL6 1792 aa12.5□□□□□ -0.41
PRPF38A-202ENST00000474048 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
PRPF38A-202ENST00000474048 TAF5LO75529 589 aa12.49□□□□□ -0.41
PRPF38A-202ENST00000474048 DNAJC2Q99543 621 aaKnown RBP12.49□□□□□ -0.41
PRPF38A-202ENST00000474048 TLR7Q9NYK1 1049 aaKnown RBP12.49□□□□□ -0.41
PRPF38A-202ENST00000474048 DBNLQ9UJU6 430 aaKnown RBP12.49□□□□□ -0.41
PRPF38A-202ENST00000474048 SALL3Q9BXA9 1300 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 G3V3G9 751 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 HIP1O00291 1037 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 ATP5JP18859 108 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 DCAF8Q5TAQ9 597 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 FSD1Q9BTV5 496 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 BOLA2Q9H3K6 86 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 SPON1Q9HCB6 807 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 GGA1Q9UJY5 639 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 NSFL1CQ9UNZ2 370 aaKnown RBP12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 LEMD3Q9Y2U8 911 aa12.48□□□□□ -0.41
PRPF38A-202ENST00000474048 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 UFL1O94874 794 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 SDSP20132 328 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 ATP2B4P23634 1241 aa12.47□□□□□ -0.41
PRPF38A-202ENST00000474048 ILDR2Q71H61 639 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms