RNA–Protein interactions for RNA: ENST00000472863.5

HOXB3-207, Transcript of homeobox B3, humanhuman

TSL 2 BASIC

Gene HOXB3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-207ENST00000472863 VGLL2Q8N8G2 317 aa33.57■■■□□ 2.97
HOXB3-207ENST00000472863 BOLA2Q9H3K6 86 aa33.57■■■□□ 2.97
HOXB3-207ENST00000472863 AKAP2Q9Y2D5 859 aa33.57■■■□□ 2.97
HOXB3-207ENST00000472863 TAF1P21675 1872 aa33.57■■■□□ 2.96
HOXB3-207ENST00000472863 NLGN1Q8N2Q7 840 aa33.57■■■□□ 2.96
HOXB3-207ENST00000472863 HELBQ8NG08 1087 aaPredicted RBP33.57■■■□□ 2.96
HOXB3-207ENST00000472863 CDC5LQ99459 802 aaKnown RBP33.57■■■□□ 2.96
HOXB3-207ENST00000472863 LRP5O75197 1615 aa33.56■■■□□ 2.96
HOXB3-207ENST00000472863 PDE8BO95263 885 aa33.55■■■□□ 2.96
HOXB3-207ENST00000472863 STK32BQ9NY57 414 aa33.55■■■□□ 2.96
HOXB3-207ENST00000472863 MROH5Q6ZUA9 1318 aa33.54■■■□□ 2.96
HOXB3-207ENST00000472863 ATP5JP18859 108 aa33.53■■■□□ 2.96
HOXB3-207ENST00000472863 ANKRD18AQ8IVF6 992 aa33.53■■■□□ 2.96
HOXB3-207ENST00000472863 CELF1Q92879 486 aaKnown RBP33.53■■■□□ 2.96
HOXB3-207ENST00000472863 SPEF2Q9C093 1822 aa33.53■■■□□ 2.96
HOXB3-207ENST00000472863 ADORA1P30542 326 aa33.53■■■□□ 2.96
HOXB3-207ENST00000472863 CNTROBQ8N137 903 aa33.53■■■□□ 2.96
HOXB3-207ENST00000472863 TNRC6CQ9HCJ0 1690 aaKnown RBP33.53■■■□□ 2.96
HOXB3-207ENST00000472863 ATP2B3Q16720 1220 aa33.52■■■□□ 2.96
HOXB3-207ENST00000472863 XAGE2Q96GT9 111 aa33.52■■■□□ 2.96
HOXB3-207ENST00000472863 TAF5LO75529 589 aa33.51■■■□□ 2.95
HOXB3-207ENST00000472863 CASC1Q6TDU7 716 aa33.51■■■□□ 2.95
HOXB3-207ENST00000472863 UPF2Q9HAU5 1272 aaKnown RBP33.51■■■□□ 2.95
HOXB3-207ENST00000472863 ST5P78524 1137 aa33.5■■■□□ 2.95
HOXB3-207ENST00000472863 MSL1Q68DK7 614 aa33.5■■■□□ 2.95
HOXB3-207ENST00000472863 CHMLP26374 656 aa33.49■■■□□ 2.95
HOXB3-207ENST00000472863 NDUFB9Q9Y6M9 179 aa33.49■■■□□ 2.95
HOXB3-207ENST00000472863 AK9Q5TCS8 1911 aa33.49■■■□□ 2.95
HOXB3-207ENST00000472863 SNAP23O00161 211 aa33.48■■■□□ 2.95
HOXB3-207ENST00000472863 RPS8P62241 208 aaKnown RBP33.48■■■□□ 2.95
HOXB3-207ENST00000472863 BSDC1Q9NW68 430 aaPredicted RBP33.48■■■□□ 2.95
HOXB3-207ENST00000472863 CHRNDQ07001 517 aa33.47■■■□□ 2.95
HOXB3-207ENST00000472863 EVI5LQ96CN4 794 aa33.47■■■□□ 2.95
HOXB3-207ENST00000472863 DDX46Q7L014 1031 aaKnown RBP33.47■■■□□ 2.95
HOXB3-207ENST00000472863 EDC3Q96F86 508 aaKnown RBP33.47■■■□□ 2.95
HOXB3-207ENST00000472863 MMP10P09238 476 aa33.46■■■□□ 2.95
HOXB3-207ENST00000472863 GORABQ5T7V8 394 aa33.46■■■□□ 2.95
HOXB3-207ENST00000472863 FGFR2P21802 821 aa33.45■■■□□ 2.95
HOXB3-207ENST00000472863 PUM3Q15397 648 aaKnown RBP33.45■■■□□ 2.95
HOXB3-207ENST00000472863 TBC1D32Q96NH3 1257 aa33.45■■■□□ 2.95
HOXB3-207ENST00000472863 HAUS7Q99871 368 aa33.45■■■□□ 2.95
HOXB3-207ENST00000472863 CCDC158Q5M9N0 1113 aa33.43■■■□□ 2.94
HOXB3-207ENST00000472863 CCDC125Q86Z20 511 aa33.43■■■□□ 2.94
HOXB3-207ENST00000472863 LPIN2Q92539 896 aa33.43■■■□□ 2.94
HOXB3-207ENST00000472863 DNAJC2Q99543 621 aaKnown RBP33.43■■■□□ 2.94
HOXB3-207ENST00000472863 MINPP1Q9UNW1 487 aa33.43■■■□□ 2.94
HOXB3-207ENST00000472863 ANP32AP39687 249 aaKnown RBP33.43■■■□□ 2.94
HOXB3-207ENST00000472863 C22orf23Q9BZE7 217 aa33.43■■■□□ 2.94
HOXB3-207ENST00000472863 CRY2Q49AN0 593 aa33.42■■■□□ 2.94
HOXB3-207ENST00000472863 PDGFDQ9GZP0 370 aaPredicted RBP33.42■■■□□ 2.94
HOXB3-207ENST00000472863 ESYT1Q9BSJ8 1104 aa33.41■■■□□ 2.94
HOXB3-207ENST00000472863 PARP3Q9Y6F1 533 aa33.41■■■□□ 2.94
HOXB3-207ENST00000472863 TTC39AQ5SRH9 613 aa33.41■■■□□ 2.94
HOXB3-207ENST00000472863 IFIT1P09914 478 aaKnown RBP33.4■■■□□ 2.94
HOXB3-207ENST00000472863 WTIPA6NIX2 430 aaPredicted RBP33.4■■■□□ 2.94
HOXB3-207ENST00000472863 RPGRQ92834 1020 aaKnown RBP33.4■■■□□ 2.94
HOXB3-207ENST00000472863 IL25Q9H293 177 aa33.39■■■□□ 2.94
HOXB3-207ENST00000472863 SLC5A1P13866 664 aa33.38■■■□□ 2.93
HOXB3-207ENST00000472863 GRAPQ13588 217 aa33.38■■■□□ 2.93
HOXB3-207ENST00000472863 GRAPLQ8TC17 118 aaPredicted RBP33.38■■■□□ 2.93
HOXB3-207ENST00000472863 SCARF1Q14162 830 aa33.38■■■□□ 2.93
HOXB3-207ENST00000472863 FSD1Q9BTV5 496 aa33.38■■■□□ 2.93
HOXB3-207ENST00000472863 NRXN2Q9P2S2 1712 aa33.37■■■□□ 2.93
HOXB3-207ENST00000472863 KLRG2A4D1S0 409 aaPredicted RBP33.37■■■□□ 2.93
HOXB3-207ENST00000472863 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.37■■■□□ 2.93
HOXB3-207ENST00000472863 QSER1Q2KHR3 1735 aa33.37■■■□□ 2.93
HOXB3-207ENST00000472863 CCDC102BQ68D86 513 aa33.36■■■□□ 2.93
HOXB3-207ENST00000472863 CWC27Q6UX04 472 aaKnown RBP33.36■■■□□ 2.93
HOXB3-207ENST00000472863 BRIP1Q9BX63 1249 aa33.36■■■□□ 2.93
HOXB3-207ENST00000472863 SNRKQ9NRH2 765 aa33.36■■■□□ 2.93
HOXB3-207ENST00000472863 GOLIM4O00461 696 aa33.36■■■□□ 2.93
HOXB3-207ENST00000472863 PHKA1P46020 1223 aa33.36■■■□□ 2.93
HOXB3-207ENST00000472863 SLC51AQ86UW1 340 aa33.35■■■□□ 2.93
HOXB3-207ENST00000472863 USP26Q9BXU7 913 aa33.35■■■□□ 2.93
HOXB3-207ENST00000472863 DIAPH3Q9NSV4 1193 aa33.35■■■□□ 2.93
HOXB3-207ENST00000472863 PAG1Q9NWQ8 432 aa33.35■■■□□ 2.93
HOXB3-207ENST00000472863 EIF5BO60841 1220 aaKnown RBP33.34■■■□□ 2.93
HOXB3-207ENST00000472863 FKBP4Q02790 459 aaKnown RBP eCLIP33.34■■■□□ 2.93
HOXB3-207ENST00000472863 REC8O95072 547 aa33.34■■■□□ 2.93
HOXB3-207ENST00000472863 RBM17Q96I25 401 aaKnown RBP33.34■■■□□ 2.93
HOXB3-207ENST00000472863 ANKRD31Q8N7Z5 1873 aa33.33■■■□□ 2.93
HOXB3-207ENST00000472863 PI16Q6UXB8 463 aa33.33■■■□□ 2.93
HOXB3-207ENST00000472863 ANTXR1Q9H6X2 564 aa33.33■■■□□ 2.93
HOXB3-207ENST00000472863 A0A1B0GUL6 1792 aa33.33■■■□□ 2.93
HOXB3-207ENST00000472863 RBM25P49756 843 aaKnown RBP33.32■■■□□ 2.92
HOXB3-207ENST00000472863 HOXA10P31260 410 aaPredicted RBP33.32■■■□□ 2.92
HOXB3-207ENST00000472863 MCAMP43121 646 aa33.32■■■□□ 2.92
HOXB3-207ENST00000472863 ZNF512BQ96KM6 892 aaPredicted RBP33.32■■■□□ 2.92
HOXB3-207ENST00000472863 ARAP2Q8WZ64 1704 aa33.31■■■□□ 2.92
HOXB3-207ENST00000472863 SGSM2O43147 1006 aa33.31■■■□□ 2.92
HOXB3-207ENST00000472863 UBE4AQ14139 1066 aa33.31■■■□□ 2.92
HOXB3-207ENST00000472863 BCAMP50895 628 aa33.3■■■□□ 2.92
HOXB3-207ENST00000472863 KBTBD3Q8NAB2 608 aa33.3■■■□□ 2.92
HOXB3-207ENST00000472863 FAM227BQ96M60 508 aa33.3■■■□□ 2.92
HOXB3-207ENST00000472863 ZAP70P43403 619 aa33.3■■■□□ 2.92
HOXB3-207ENST00000472863 ANKRD2Q9GZV1 360 aa33.3■■■□□ 2.92
HOXB3-207ENST00000472863 CHGBP05060 677 aa33.29■■■□□ 2.92
HOXB3-207ENST00000472863 ARID4AP29374 1257 aaPredicted RBP33.29■■■□□ 2.92
HOXB3-207ENST00000472863 NMIQ13287 307 aaPredicted RBP33.29■■■□□ 2.92
HOXB3-207ENST00000472863 HIP1O00291 1037 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms