RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ECE2O60344 883 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 SCARF1Q14162 830 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 SLC4A8Q2Y0W8 1093 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 MOB2Q70IA6 237 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 NBPF11Q86T75 865 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 EYA3Q99504 573 aa13.68□□□□□ -0.22
CDHR3-209ENST00000472116 UTP14AQ9BVJ6 771 aaKnown RBP13.68□□□□□ -0.22
CDHR3-209ENST00000472116 ASTN2O75129 1339 aaPredicted RBP13.67□□□□□ -0.22
CDHR3-209ENST00000472116 PITPNM2Q9BZ72 1349 aa13.67□□□□□ -0.22
CDHR3-209ENST00000472116 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
CDHR3-209ENST00000472116 GRAPQ13588 217 aa13.67□□□□□ -0.22
CDHR3-209ENST00000472116 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
CDHR3-209ENST00000472116 GRAPLQ8TC17 118 aaPredicted RBP13.67□□□□□ -0.22
CDHR3-209ENST00000472116 EFCC1Q9HA90 598 aa13.67□□□□□ -0.22
CDHR3-209ENST00000472116 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
CDHR3-209ENST00000472116 RRP7AQ9Y3A4 280 aaKnown RBP13.67□□□□□ -0.22
CDHR3-209ENST00000472116 PSME4Q14997 1843 aa13.67□□□□□ -0.22
CDHR3-209ENST00000472116 HTTP42858 3142 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 A0A0C4DFX4 3053 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 INHBEP58166 350 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 SLC10A5Q5PT55 438 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 TTLL7Q6ZT98 887 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 ARMC9Q7Z3E5 817 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 R3HDMLQ9H3Y0 253 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 RBM27Q9P2N5 1060 aaKnown RBP13.66□□□□□ -0.22
CDHR3-209ENST00000472116 KDM3BQ7LBC6 1761 aa13.66□□□□□ -0.22
CDHR3-209ENST00000472116 MYL6BP14649 208 aa13.65□□□□□ -0.22
CDHR3-209ENST00000472116 ARHGEF6Q15052 776 aa13.65□□□□□ -0.22
CDHR3-209ENST00000472116 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
CDHR3-209ENST00000472116 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
CDHR3-209ENST00000472116 DPF3Q92784 378 aa13.65□□□□□ -0.22
CDHR3-209ENST00000472116 ZNF609O15014 1411 aa13.64□□□□□ -0.23
CDHR3-209ENST00000472116 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
CDHR3-209ENST00000472116 MANSC4A6NHS7 340 aaPredicted RBP13.64□□□□□ -0.23
CDHR3-209ENST00000472116 SLC9C1Q4G0N8 1177 aa13.64□□□□□ -0.23
CDHR3-209ENST00000472116 NECTIN2Q92692 538 aa13.64□□□□□ -0.23
CDHR3-209ENST00000472116 BRCA2P51587 3418 aa13.64□□□□□ -0.23
CDHR3-209ENST00000472116 COL6A3P12111 3177 aa13.63□□□□□ -0.23
CDHR3-209ENST00000472116 VIL1P09327 827 aaKnown RBP13.63□□□□□ -0.23
CDHR3-209ENST00000472116 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
CDHR3-209ENST00000472116 AGBL3Q8NEM8 1001 aa13.63□□□□□ -0.23
CDHR3-209ENST00000472116 CD99L2Q8TCZ2 262 aa13.63□□□□□ -0.23
CDHR3-209ENST00000472116 ZNF333Q96JL9 665 aa13.63□□□□□ -0.23
CDHR3-209ENST00000472116 ZC3H12CQ9C0D7 883 aaKnown RBP13.63□□□□□ -0.23
CDHR3-209ENST00000472116 ZNF280AP59817 542 aaPredicted RBP13.62□□□□□ -0.23
CDHR3-209ENST00000472116 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
CDHR3-209ENST00000472116 MYOZ2Q9NPC6 264 aa13.62□□□□□ -0.23
CDHR3-209ENST00000472116 KCNQ5Q9NR82 932 aa13.62□□□□□ -0.23
CDHR3-209ENST00000472116 LAMB1P07942 1786 aa13.62□□□□□ -0.23
CDHR3-209ENST00000472116 USP17L8P0C7I0 530 aa13.61□□□□□ -0.23
CDHR3-209ENST00000472116 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
CDHR3-209ENST00000472116 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
CDHR3-209ENST00000472116 SPRYD7Q5W111 196 aa13.61□□□□□ -0.23
CDHR3-209ENST00000472116 MCM10Q7L590 875 aa13.61□□□□□ -0.23
CDHR3-209ENST00000472116 SP3Q02447 781 aa13.6□□□□□ -0.23
CDHR3-209ENST00000472116 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
CDHR3-209ENST00000472116 TAF7Q15545 349 aaPredicted RBP13.6□□□□□ -0.23
CDHR3-209ENST00000472116 HSP90AB3PQ58FF7 597 aa13.6□□□□□ -0.23
CDHR3-209ENST00000472116 PRAMEF18Q5VWM3 479 aa13.6□□□□□ -0.23
CDHR3-209ENST00000472116 RSBN1LQ6PCB5 846 aaPredicted RBP13.6□□□□□ -0.23
CDHR3-209ENST00000472116 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.6□□□□□ -0.23
CDHR3-209ENST00000472116 PRKG1Q13976 671 aa13.59□□□□□ -0.23
CDHR3-209ENST00000472116 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
CDHR3-209ENST00000472116 HTATIP2Q9BUP3 242 aa13.59□□□□□ -0.23
CDHR3-209ENST00000472116 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
CDHR3-209ENST00000472116 TRMT112Q9UI30 125 aaKnown RBP13.59□□□□□ -0.23
CDHR3-209ENST00000472116 SCAF8Q9UPN6 1271 aaKnown RBP13.59□□□□□ -0.23
CDHR3-209ENST00000472116 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
CDHR3-209ENST00000472116 SH3TC1Q8TE82 1336 aa13.59□□□□□ -0.23
CDHR3-209ENST00000472116 A0A1W2PPC1 479 aa13.58□□□□□ -0.24
CDHR3-209ENST00000472116 MYCP01106 439 aaPredicted RBP13.58□□□□□ -0.24
CDHR3-209ENST00000472116 ZBTB48P10074 688 aaPredicted RBP13.58□□□□□ -0.24
CDHR3-209ENST00000472116 PNISRQ8TF01 805 aaKnown RBP13.58□□□□□ -0.24
CDHR3-209ENST00000472116 SLC10A4Q96EP9 437 aa13.58□□□□□ -0.24
CDHR3-209ENST00000472116 PHACTR3Q96KR7 559 aa13.58□□□□□ -0.24
CDHR3-209ENST00000472116 ANGEL1Q9UNK9 670 aaKnown RBP13.58□□□□□ -0.24
CDHR3-209ENST00000472116 GPSM2P81274 684 aa13.57□□□□□ -0.24
CDHR3-209ENST00000472116 CRHR2Q13324 411 aa13.57□□□□□ -0.24
CDHR3-209ENST00000472116 AMER1Q5JTC6 1135 aaPredicted RBP13.57□□□□□ -0.24
CDHR3-209ENST00000472116 OGFOD1Q8N543 542 aa13.57□□□□□ -0.24
CDHR3-209ENST00000472116 TBC1D16Q8TBP0 767 aa13.57□□□□□ -0.24
CDHR3-209ENST00000472116 ERBB4Q15303 1308 aa13.57□□□□□ -0.24
CDHR3-209ENST00000472116 COL3A1P02461 1466 aaPredicted RBP13.56□□□□□ -0.24
CDHR3-209ENST00000472116 ZNF646O15015 1829 aaPredicted RBP13.56□□□□□ -0.24
CDHR3-209ENST00000472116 HTATSF1O43719 755 aaKnown RBP13.56□□□□□ -0.24
CDHR3-209ENST00000472116 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
CDHR3-209ENST00000472116 PTCH2Q9Y6C5 1203 aa13.56□□□□□ -0.24
CDHR3-209ENST00000472116 RANBP2P49792 3224 aaKnown RBP13.56□□□□□ -0.24
CDHR3-209ENST00000472116 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDHR3-209ENST00000472116 UFL1O94874 794 aa13.55□□□□□ -0.24
CDHR3-209ENST00000472116 EIF4G2P78344 907 aaKnown RBP eCLIP13.55□□□□□ -0.24
CDHR3-209ENST00000472116 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
CDHR3-209ENST00000472116 APOBEC3FQ8IUX4 373 aaKnown RBP13.55□□□□□ -0.24
CDHR3-209ENST00000472116 MIS18AQ9NYP9 233 aa13.55□□□□□ -0.24
CDHR3-209ENST00000472116 ANKIB1Q9P2G1 1089 aa13.55□□□□□ -0.24
CDHR3-209ENST00000472116 DLG5Q8TDM6 1919 aa13.54□□□□□ -0.24
CDHR3-209ENST00000472116 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
CDHR3-209ENST00000472116 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
CDHR3-209ENST00000472116 NLRP10Q86W26 655 aa13.54□□□□□ -0.24
CDHR3-209ENST00000472116 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms