RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 KDM2BQ8NHM5 1336 aa19.18■□□□□ 0.66
SDC3-203ENST00000471567 GLTPD2A6NH11 291 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 AOC3Q16853 763 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 TAF7LQ5H9L4 462 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 TBC1D16Q8TBP0 767 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 EYA3Q99504 573 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 MEIS3Q99687 375 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 POLLQ9UGP5 575 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 GGA1Q9UJY5 639 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 TIAM2Q8IVF5 1701 aa19.17■□□□□ 0.66
SDC3-203ENST00000471567 DUOX1Q9NRD9 1551 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 C6orf229H3BNL8 230 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 FZD9O00144 591 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 ATP2B4P23634 1241 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 WASHC4Q2M389 1173 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 NIM1KQ8IY84 436 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 ANKRD2Q9GZV1 360 aa19.16■□□□□ 0.66
SDC3-203ENST00000471567 LTBP1Q14766 1721 aa19.15■□□□□ 0.66
SDC3-203ENST00000471567 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
SDC3-203ENST00000471567 ZNF526Q8TF50 670 aaPredicted RBP19.15■□□□□ 0.66
SDC3-203ENST00000471567 LRRFIP2Q9Y608 721 aaKnown RBP19.15■□□□□ 0.66
SDC3-203ENST00000471567 UFL1O94874 794 aa19.14■□□□□ 0.65
SDC3-203ENST00000471567 ZNF594Q96JF6 807 aaPredicted RBP19.14■□□□□ 0.65
SDC3-203ENST00000471567 LEMD3Q9Y2U8 911 aa19.14■□□□□ 0.65
SDC3-203ENST00000471567 RLBP1P12271 317 aa19.13■□□□□ 0.65
SDC3-203ENST00000471567 EIF6P56537 245 aaKnown RBP19.13■□□□□ 0.65
SDC3-203ENST00000471567 CHRNDQ07001 517 aa19.13■□□□□ 0.65
SDC3-203ENST00000471567 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.13■□□□□ 0.65
SDC3-203ENST00000471567 ZC3H12CQ9C0D7 883 aaKnown RBP19.13■□□□□ 0.65
SDC3-203ENST00000471567 ZNRF3Q9ULT6 936 aa19.13■□□□□ 0.65
SDC3-203ENST00000471567 SPEF2Q9C093 1822 aa19.12■□□□□ 0.65
SDC3-203ENST00000471567 COL4A5P29400 1685 aa19.12■□□□□ 0.65
SDC3-203ENST00000471567 GNAI2P04899 355 aa19.12■□□□□ 0.65
SDC3-203ENST00000471567 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
SDC3-203ENST00000471567 CNNM1Q9NRU3 951 aa19.12■□□□□ 0.65
SDC3-203ENST00000471567 RIMBP2O15034 1052 aa19.11■□□□□ 0.65
SDC3-203ENST00000471567 RFX5P48382 616 aaPredicted RBP19.11■□□□□ 0.65
SDC3-203ENST00000471567 ZNF541Q9H0D2 1346 aa19.1■□□□□ 0.65
SDC3-203ENST00000471567 ZBTB7BO15156 539 aaPredicted RBP19.1■□□□□ 0.65
SDC3-203ENST00000471567 DDNO94850 711 aaPredicted RBP19.1■□□□□ 0.65
SDC3-203ENST00000471567 MTX1Q13505 466 aa19.1■□□□□ 0.65
SDC3-203ENST00000471567 GPC2Q8N158 579 aa19.1■□□□□ 0.65
SDC3-203ENST00000471567 PANK1Q8TE04 598 aa19.1■□□□□ 0.65
SDC3-203ENST00000471567 NMRK2Q9NPI5 230 aa19.1■□□□□ 0.65
SDC3-203ENST00000471567 RIPOR2Q9Y4F9 1068 aa19.1■□□□□ 0.65
SDC3-203ENST00000471567 MED23Q9ULK4 1368 aa19.09■□□□□ 0.65
SDC3-203ENST00000471567 ZNF804BA4D1E1 1349 aa19.09■□□□□ 0.65
SDC3-203ENST00000471567 MROH5Q6ZUA9 1318 aa19.09■□□□□ 0.65
SDC3-203ENST00000471567 PDE3AQ14432 1141 aa19.09■□□□□ 0.65
SDC3-203ENST00000471567 L3MBTL3Q96JM7 780 aaPredicted RBP19.09■□□□□ 0.65
SDC3-203ENST00000471567 PUS3Q9BZE2 481 aaKnown RBP19.09■□□□□ 0.65
SDC3-203ENST00000471567 FBXO3Q9UK99 471 aa19.09■□□□□ 0.65
SDC3-203ENST00000471567 KIF3CO14782 793 aa19.08■□□□□ 0.64
SDC3-203ENST00000471567 PLIN1O60240 522 aa19.08■□□□□ 0.64
SDC3-203ENST00000471567 VEGFAP15692 232 aaPredicted RBP19.08■□□□□ 0.64
SDC3-203ENST00000471567 KCNJ4P48050 445 aa19.08■□□□□ 0.64
SDC3-203ENST00000471567 PTPN12Q05209 780 aaKnown RBP19.08■□□□□ 0.64
SDC3-203ENST00000471567 GPR101Q96P66 508 aaPredicted RBP19.08■□□□□ 0.64
SDC3-203ENST00000471567 RRAGCQ9HB90 399 aa19.08■□□□□ 0.64
SDC3-203ENST00000471567 WTIPA6NIX2 430 aaPredicted RBP19.07■□□□□ 0.64
SDC3-203ENST00000471567 G3V3G9 751 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 TAF5LO75529 589 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 CXCL9Q07325 125 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 MVPQ14764 893 aaKnown RBP19.07■□□□□ 0.64
SDC3-203ENST00000471567 TNIP1Q15025 636 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 DCAF8Q5TAQ9 597 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 C15orf52Q6ZUT6 534 aaKnown RBP19.07■□□□□ 0.64
SDC3-203ENST00000471567 HELBQ8NG08 1087 aaPredicted RBP19.07■□□□□ 0.64
SDC3-203ENST00000471567 DBNDD1Q9H9R9 158 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 WDR90Q96KV7 1748 aa19.07■□□□□ 0.64
SDC3-203ENST00000471567 YDJCA8MPS7 323 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 EYA2O00167 538 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 ECE2O60344 883 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 DOK7Q18PE1 504 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 LRRC24Q50LG9 513 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 CIAPIN1Q6FI81 312 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 KLHDC4Q8TBB5 520 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 CHMP4BQ9H444 224 aaKnown RBP19.06■□□□□ 0.64
SDC3-203ENST00000471567 DDX19BQ9UMR2 479 aa19.06■□□□□ 0.64
SDC3-203ENST00000471567 IQCA1LA6NCM1 817 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 POTECB2RU33 542 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 SRGAP3O43295 1099 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 CIAO1O76071 339 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 UBE4AQ14139 1066 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 PODNQ7Z5L7 613 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 COA1Q9GZY4 146 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 COPRSQ9NQ92 184 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 GJA3Q9Y6H8 435 aa19.05■□□□□ 0.64
SDC3-203ENST00000471567 METTL24Q5JXM2 366 aa19.04■□□□□ 0.64
SDC3-203ENST00000471567 COG6Q9Y2V7 657 aa19.04■□□□□ 0.64
SDC3-203ENST00000471567 RAD17O75943 681 aa19.03■□□□□ 0.64
SDC3-203ENST00000471567 PDE8BO95263 885 aa19.03■□□□□ 0.64
SDC3-203ENST00000471567 ATP8B2P98198 1209 aa19.03■□□□□ 0.64
SDC3-203ENST00000471567 TXNRD3Q86VQ6 643 aa19.03■□□□□ 0.64
SDC3-203ENST00000471567 IRS2Q9Y4H2 1338 aa19.02■□□□□ 0.64
SDC3-203ENST00000471567 A0A1B0GUL6 1792 aa19.02■□□□□ 0.64
SDC3-203ENST00000471567 SNAP23O00161 211 aa19.02■□□□□ 0.64
SDC3-203ENST00000471567 IL15P40933 162 aaPredicted RBP19.02■□□□□ 0.64
SDC3-203ENST00000471567 ATG9AQ7Z3C6 839 aa19.02■□□□□ 0.64
SDC3-203ENST00000471567 C16orf71Q8IYS4 520 aaPredicted RBP19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms