RNA–Protein interactions for RNA: ENST00000469415.1

MCF2L-221, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 3,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-221ENST00000469415 KBTBD3Q8NAB2 608 aa21.15■□□□□ 0.98
MCF2L-221ENST00000469415 TTC12Q9H892 705 aaPredicted RBP21.15■□□□□ 0.98
MCF2L-221ENST00000469415 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.15■□□□□ 0.98
MCF2L-221ENST00000469415 KRT85P78386 507 aa21.15■□□□□ 0.98
MCF2L-221ENST00000469415 USP54Q70EL1 1684 aa21.14■□□□□ 0.98
MCF2L-221ENST00000469415 EYA2O00167 538 aa21.14■□□□□ 0.98
MCF2L-221ENST00000469415 ADCY5O95622 1261 aa21.14■□□□□ 0.98
MCF2L-221ENST00000469415 BICD2Q8TD16 824 aa21.14■□□□□ 0.98
MCF2L-221ENST00000469415 PDLIM2Q96JY6 352 aa21.14■□□□□ 0.98
MCF2L-221ENST00000469415 SPATA32Q96LK8 384 aa21.14■□□□□ 0.98
MCF2L-221ENST00000469415 SCARF1Q14162 830 aa21.14■□□□□ 0.97
MCF2L-221ENST00000469415 HELBQ8NG08 1087 aaPredicted RBP21.14■□□□□ 0.97
MCF2L-221ENST00000469415 OVOS2A0A0G2JMS6 1433 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 A0A087WWV3 80 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 DNTTIP2Q5QJE6 756 aaKnown RBP21.13■□□□□ 0.97
MCF2L-221ENST00000469415 BTG4Q9NY30 223 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 TBC1D2BQ9UPU7 963 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 C5P01031 1676 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 SNAP23O00161 211 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 KCNB2Q92953 911 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 DACT1Q9NYF0 836 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 HLFQ16534 295 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 OTUD7BQ6GQQ9 843 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 STK11IPQ8N1F8 1099 aa21.13■□□□□ 0.97
MCF2L-221ENST00000469415 SCRN1Q12765 414 aa21.12■□□□□ 0.97
MCF2L-221ENST00000469415 ANKRD1Q15327 319 aa21.12■□□□□ 0.97
MCF2L-221ENST00000469415 TTC39AQ5SRH9 613 aa21.12■□□□□ 0.97
MCF2L-221ENST00000469415 RBM10P98175 930 aaKnown RBP21.12■□□□□ 0.97
MCF2L-221ENST00000469415 PIGBQ92521 554 aa21.12■□□□□ 0.97
MCF2L-221ENST00000469415 ADAMTSL3P82987 1691 aa21.11■□□□□ 0.97
MCF2L-221ENST00000469415 TRPM3Q9HCF6 1732 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-221ENST00000469415 IL15P40933 162 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-221ENST00000469415 U3KPZ7 1027 aaPredicted RBP21.11■□□□□ 0.97
MCF2L-221ENST00000469415 M0R2C6 588 aa21.11■□□□□ 0.97
MCF2L-221ENST00000469415 NOL7Q9UMY1 257 aaKnown RBP21.11■□□□□ 0.97
MCF2L-221ENST00000469415 ERCC4Q92889 916 aaPredicted RBP21.1■□□□□ 0.97
MCF2L-221ENST00000469415 OSBP2Q969R2 916 aa21.1■□□□□ 0.97
MCF2L-221ENST00000469415 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.1■□□□□ 0.97
MCF2L-221ENST00000469415 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
MCF2L-221ENST00000469415 HMG20BQ9P0W2 317 aa21.1■□□□□ 0.97
MCF2L-221ENST00000469415 XAGE2Q96GT9 111 aa21.1■□□□□ 0.97
MCF2L-221ENST00000469415 ZKSCAN5Q9Y2L8 839 aa21.1■□□□□ 0.97
MCF2L-221ENST00000469415 ZAP70P43403 619 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 CCDC191Q8NCU4 936 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 PDCP20941 246 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 GTF3C6Q969F1 213 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 GJB4Q9NTQ9 266 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 CCDC39Q9UFE4 941 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 MAST3O60307 1309 aa21.09■□□□□ 0.97
MCF2L-221ENST00000469415 ZNF142P52746 1687 aaPredicted RBP21.08■□□□□ 0.96
MCF2L-221ENST00000469415 CAMTA1Q9Y6Y1 1673 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 ERVV-2B6SEH9 535 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 APPP05067 770 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 KRT32Q14532 448 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 METTL24Q5JXM2 366 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 KIF6Q6ZMV9 814 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 LUZP1Q86V48 1076 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 TMEM87AQ8NBN3 555 aa21.08■□□□□ 0.96
MCF2L-221ENST00000469415 CCDC158Q5M9N0 1113 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 LDHAL6AQ6ZMR3 332 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 PODXL2Q9NZ53 605 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 AP5Z1O43299 807 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 IFIT5Q13325 482 aaKnown RBP21.07■□□□□ 0.96
MCF2L-221ENST00000469415 TCIRG1Q13488 830 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 NUP62CLQ9H1M0 184 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 CNNM1Q9NRU3 951 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 DENND2AQ9ULE3 1009 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 E7EWF7 191 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 CSPP1Q1MSJ5 1256 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 TNMDQ9H2S6 317 aa21.07■□□□□ 0.96
MCF2L-221ENST00000469415 NR1I2O75469 434 aa21.06■□□□□ 0.96
MCF2L-221ENST00000469415 RXRAP19793 462 aa21.06■□□□□ 0.96
MCF2L-221ENST00000469415 LEO1Q8WVC0 666 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-221ENST00000469415 GREM2Q9H772 168 aa21.06■□□□□ 0.96
MCF2L-221ENST00000469415 A0A0U1RQG5 324 aaPredicted RBP21.06■□□□□ 0.96
MCF2L-221ENST00000469415 RNF113AO15541 343 aaKnown RBP21.06■□□□□ 0.96
MCF2L-221ENST00000469415 IDH1O75874 414 aaKnown RBP21.06■□□□□ 0.96
MCF2L-221ENST00000469415 PTPDC1A2A3K4 754 aa21.05■□□□□ 0.96
MCF2L-221ENST00000469415 DHX32Q7L7V1 743 aaKnown RBP21.05■□□□□ 0.96
MCF2L-221ENST00000469415 USPL1Q5W0Q7 1092 aa21.05■□□□□ 0.96
MCF2L-221ENST00000469415 ACSBG1Q96GR2 724 aa21.05■□□□□ 0.96
MCF2L-221ENST00000469415 CARD10Q9BWT7 1032 aa21.05■□□□□ 0.96
MCF2L-221ENST00000469415 PUS7LQ9H0K6 701 aaKnown RBP21.05■□□□□ 0.96
MCF2L-221ENST00000469415 TRMT112Q9UI30 125 aaKnown RBP21.05■□□□□ 0.96
MCF2L-221ENST00000469415 N4BP2Q86UW6 1770 aaPredicted RBP21.05■□□□□ 0.96
MCF2L-221ENST00000469415 BCL11BQ9C0K0 894 aaPredicted RBP21.04■□□□□ 0.96
MCF2L-221ENST00000469415 PGBD1Q96JS3 809 aa21.04■□□□□ 0.96
MCF2L-221ENST00000469415 ZBTB1Q9Y2K1 713 aa21.04■□□□□ 0.96
MCF2L-221ENST00000469415 ADAMTS2O95450 1211 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 ZMYM1Q5SVZ6 1142 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 CCDC144CPQ8IYA2 1237 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 ATG3Q9NT62 314 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 PHRF1Q9P1Y6 1649 aaKnown RBP21.03■□□□□ 0.96
MCF2L-221ENST00000469415 OFD1O75665 1012 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 POLR3DP05423 398 aaPredicted RBP21.03■□□□□ 0.96
MCF2L-221ENST00000469415 ITGA6P23229 1130 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 MAP3K11Q16584 847 aa21.03■□□□□ 0.96
MCF2L-221ENST00000469415 INCENPQ9NQS7 918 aa21.02■□□□□ 0.96
MCF2L-221ENST00000469415 CCDC192P0DO97 292 aa21.02■□□□□ 0.96
MCF2L-221ENST00000469415 DRC7Q8IY82 874 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms