RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 CCDC85AQ96PX6 553 aaPredicted RBP10.7□□□□□ -0.7
SSBP1-208ENST00000469123 ZNF277Q9NRM2 450 aaPredicted RBP10.7□□□□□ -0.7
SSBP1-208ENST00000469123 GGA1Q9UJY5 639 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 NSFL1CQ9UNZ2 370 aaKnown RBP10.7□□□□□ -0.7
SSBP1-208ENST00000469123 LEMD3Q9Y2U8 911 aa10.7□□□□□ -0.7
SSBP1-208ENST00000469123 PPIP5K2O43314 1243 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 MTX1Q13505 466 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 EPHA10Q5JZY3 1008 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 LDHAL6AQ6ZMR3 332 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 NIM1KQ8IY84 436 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 LARGE2Q8N3Y3 721 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 TMEM57Q8N5G2 664 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 ANKRD44Q8N8A2 993 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 MEIS3Q99687 375 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 DDX19BQ9UMR2 479 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 MINPP1Q9UNW1 487 aa10.69□□□□□ -0.7
SSBP1-208ENST00000469123 MROH5Q6ZUA9 1318 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 GLTPD2A6NH11 291 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 C6orf229H3BNL8 230 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 FZD9O00144 591 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 GPSM2P81274 684 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 WASHC4Q2M389 1173 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 OLFM4Q6UX06 510 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 TBC1D16Q8TBP0 767 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 ZC3H12CQ9C0D7 883 aaKnown RBP10.68□□□□□ -0.7
SSBP1-208ENST00000469123 CNNM1Q9NRU3 951 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 LRRFIP2Q9Y608 721 aaKnown RBP10.68□□□□□ -0.7
SSBP1-208ENST00000469123 DUOX1Q9NRD9 1551 aa10.68□□□□□ -0.7
SSBP1-208ENST00000469123 MED23Q9ULK4 1368 aa10.67□□□□□ -0.7
SSBP1-208ENST00000469123 UFL1O94874 794 aa10.67□□□□□ -0.7
SSBP1-208ENST00000469123 EIF6P56537 245 aaKnown RBP10.67□□□□□ -0.7
SSBP1-208ENST00000469123 MVPQ14764 893 aaKnown RBP10.67□□□□□ -0.7
SSBP1-208ENST00000469123 ZNF784Q8NCA9 323 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-208ENST00000469123 GPBP1L1Q9HC44 474 aaPredicted RBP10.67□□□□□ -0.7
SSBP1-208ENST00000469123 ZNRF3Q9ULT6 936 aa10.67□□□□□ -0.7
SSBP1-208ENST00000469123 ZBTB7BO15156 539 aaPredicted RBP10.66□□□□□ -0.7
SSBP1-208ENST00000469123 CIAO1O76071 339 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 RLBP1P12271 317 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 KCNJ4P48050 445 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 PRELPP51888 382 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 CHRNDQ07001 517 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 AOC3Q16853 763 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 C15orf52Q6ZUT6 534 aaKnown RBP10.66□□□□□ -0.7
SSBP1-208ENST00000469123 POLLQ9UGP5 575 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 A0A1B0GUL6 1792 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 WDR90Q96KV7 1748 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 COL4A1P02462 1669 aa10.66□□□□□ -0.7
SSBP1-208ENST00000469123 SCN4AP35499 1836 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 ZNF804BA4D1E1 1349 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 IQCA1LA6NCM1 817 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 G3V3G9 751 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 UBE4AQ14139 1066 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 TNIP1Q15025 636 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 DCAF8Q5TAQ9 597 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 PODNQ7Z5L7 613 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 GPC2Q8N158 579 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 L3MBTL3Q96JM7 780 aaPredicted RBP10.65□□□□□ -0.7
SSBP1-208ENST00000469123 COA1Q9GZY4 146 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 COPRSQ9NQ92 184 aa10.65□□□□□ -0.7
SSBP1-208ENST00000469123 PSME4Q14997 1843 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 EYA2O00167 538 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-208ENST00000469123 RFX5P48382 616 aaPredicted RBP10.64□□□□□ -0.71
SSBP1-208ENST00000469123 MMP14P50281 582 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 PTPN12Q05209 780 aaKnown RBP10.64□□□□□ -0.71
SSBP1-208ENST00000469123 AAMPQ13685 434 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 PANK1Q8TE04 598 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 TNNQ9UQP3 1299 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 RIPOR2Q9Y4F9 1068 aa10.64□□□□□ -0.71
SSBP1-208ENST00000469123 HMMRO75330 724 aa10.63□□□□□ -0.71
SSBP1-208ENST00000469123 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-208ENST00000469123 RRP1P56182 461 aaKnown RBP10.63□□□□□ -0.71
SSBP1-208ENST00000469123 METTL24Q5JXM2 366 aa10.63□□□□□ -0.71
SSBP1-208ENST00000469123 CIAPIN1Q6FI81 312 aa10.63□□□□□ -0.71
SSBP1-208ENST00000469123 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
SSBP1-208ENST00000469123 ZNF609O15014 1411 aa10.63□□□□□ -0.71
SSBP1-208ENST00000469123 PLIN1O60240 522 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 ECE2O60344 883 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 PDE8BO95263 885 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 VEGFAP15692 232 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-208ENST00000469123 RPS12P25398 132 aaKnown RBP10.62□□□□□ -0.71
SSBP1-208ENST00000469123 LMOD1P29536 600 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-208ENST00000469123 ATP8B2P98198 1209 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 PUM3Q15397 648 aaKnown RBP10.62□□□□□ -0.71
SSBP1-208ENST00000469123 HSP90AB4PQ58FF6 505 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 ZNF804AQ7Z570 1209 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 RPAP2Q8IXW5 612 aaPredicted RBP10.62□□□□□ -0.71
SSBP1-208ENST00000469123 SSH3Q8TE77 659 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 ZBTB40Q9NUA8 1239 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 COG6Q9Y2V7 657 aa10.62□□□□□ -0.71
SSBP1-208ENST00000469123 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 ZNF541Q9H0D2 1346 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 COL4A5P29400 1685 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 RIMBP2O15034 1052 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 IFIT1P09914 478 aaKnown RBP10.61□□□□□ -0.71
SSBP1-208ENST00000469123 SLC5A1P13866 664 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 POLA2Q14181 598 aa10.61□□□□□ -0.71
SSBP1-208ENST00000469123 CAVIN4Q5BKX8 364 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms