RNA–Protein interactions for RNA: ENST00000468479.5

FDPS-207, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 938 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-207ENST00000468479 NOP58Q9Y2X3 529 aaKnown RBP16.46■□□□□ 0.23
FDPS-207ENST00000468479 COL11A2P13942 1736 aaPredicted RBP16.45■□□□□ 0.22
FDPS-207ENST00000468479 SRGAP3O43295 1099 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
FDPS-207ENST00000468479 CWF19L2Q2TBE0 894 aaKnown RBP16.45■□□□□ 0.22
FDPS-207ENST00000468479 SLC10A5Q5PT55 438 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 NLRP10Q86W26 655 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 ERC1Q8IUD2 1116 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 SMC1BQ8NDV3 1235 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 IPO9Q96P70 1041 aaKnown RBP16.45■□□□□ 0.22
FDPS-207ENST00000468479 MYD88Q99836 296 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 SH3TC1Q8TE82 1336 aa16.45■□□□□ 0.22
FDPS-207ENST00000468479 TRIM28Q13263 835 aaKnown RBP16.44■□□□□ 0.22
FDPS-207ENST00000468479 PSMD1Q99460 953 aa16.44■□□□□ 0.22
FDPS-207ENST00000468479 AOX1Q06278 1338 aa16.44■□□□□ 0.22
FDPS-207ENST00000468479 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
FDPS-207ENST00000468479 CCDC191Q8NCU4 936 aa16.43■□□□□ 0.22
FDPS-207ENST00000468479 KIF1BPQ96EK5 621 aa16.43■□□□□ 0.22
FDPS-207ENST00000468479 SURF6O75683 361 aaKnown RBP16.42■□□□□ 0.22
FDPS-207ENST00000468479 TTC22Q5TAA0 569 aa16.42■□□□□ 0.22
FDPS-207ENST00000468479 DDX46Q7L014 1031 aaKnown RBP16.42■□□□□ 0.22
FDPS-207ENST00000468479 JDP2Q8WYK2 163 aa16.42■□□□□ 0.22
FDPS-207ENST00000468479 CWC25Q9NXE8 425 aaPredicted RBP16.42■□□□□ 0.22
FDPS-207ENST00000468479 STAP2Q9UGK3 403 aa16.42■□□□□ 0.22
FDPS-207ENST00000468479 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
FDPS-207ENST00000468479 ARFGEF2Q9Y6D5 1785 aa16.41■□□□□ 0.22
FDPS-207ENST00000468479 IQCA1LA6NCM1 817 aa16.41■□□□□ 0.22
FDPS-207ENST00000468479 BBOX1O75936 387 aa16.41■□□□□ 0.22
FDPS-207ENST00000468479 ZNF277Q9NRM2 450 aaPredicted RBP16.41■□□□□ 0.22
FDPS-207ENST00000468479 H7C1W4 665 aa16.4■□□□□ 0.22
FDPS-207ENST00000468479 CDC45O75419 566 aa16.4■□□□□ 0.22
FDPS-207ENST00000468479 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
FDPS-207ENST00000468479 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
FDPS-207ENST00000468479 SYNE4Q8N205 404 aa16.4■□□□□ 0.22
FDPS-207ENST00000468479 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
FDPS-207ENST00000468479 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
FDPS-207ENST00000468479 SMARCA5O60264 1052 aaPredicted RBP16.39■□□□□ 0.21
FDPS-207ENST00000468479 PDE1AP54750 535 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 RABL6Q3YEC7 729 aaPredicted RBP16.39■□□□□ 0.21
FDPS-207ENST00000468479 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 KAZALD1Q96I82 304 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 ISCA1Q9BUE6 129 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
FDPS-207ENST00000468479 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 SALL3Q9BXA9 1300 aa16.39■□□□□ 0.21
FDPS-207ENST00000468479 NUP98P52948 1817 aa16.38■□□□□ 0.21
FDPS-207ENST00000468479 SLX4Q8IY92 1834 aa16.38■□□□□ 0.21
FDPS-207ENST00000468479 APBB1O00213 710 aa16.38■□□□□ 0.21
FDPS-207ENST00000468479 HCLS1P14317 486 aaPredicted RBP16.38■□□□□ 0.21
FDPS-207ENST00000468479 CASP7P55210 303 aa16.38■□□□□ 0.21
FDPS-207ENST00000468479 CASC1Q6TDU7 716 aa16.38■□□□□ 0.21
FDPS-207ENST00000468479 RHPN1Q8TCX5 695 aa16.38■□□□□ 0.21
FDPS-207ENST00000468479 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
FDPS-207ENST00000468479 MX1P20591 662 aa16.37■□□□□ 0.21
FDPS-207ENST00000468479 EIF6P56537 245 aaKnown RBP16.37■□□□□ 0.21
FDPS-207ENST00000468479 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
FDPS-207ENST00000468479 TBC1D32Q96NH3 1257 aa16.37■□□□□ 0.21
FDPS-207ENST00000468479 CACNA1SQ13698 1873 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 FER1L6Q2WGJ9 1857 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 DDNO94850 711 aaPredicted RBP16.36■□□□□ 0.21
FDPS-207ENST00000468479 SEC24BO95487 1268 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 G3BP1Q13283 466 aaKnown RBP eCLIP16.36■□□□□ 0.211e-7■■□□□ 13.7
FDPS-207ENST00000468479 OS9Q13438 667 aaPredicted RBP16.36■□□□□ 0.21
FDPS-207ENST00000468479 GRAPQ13588 217 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 C3orf67Q6ZVT6 689 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 LARGE2Q8N3Y3 721 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 GRAPLQ8TC17 118 aaPredicted RBP16.36■□□□□ 0.21
FDPS-207ENST00000468479 L3MBTL3Q96JM7 780 aaPredicted RBP16.36■□□□□ 0.21
FDPS-207ENST00000468479 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
FDPS-207ENST00000468479 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
FDPS-207ENST00000468479 DPP8Q6V1X1 898 aaPredicted RBP16.35■□□□□ 0.21
FDPS-207ENST00000468479 UBE3BQ7Z3V4 1068 aa16.35■□□□□ 0.21
FDPS-207ENST00000468479 SP8Q8IXZ3 490 aa16.35■□□□□ 0.21
FDPS-207ENST00000468479 GPC2Q8N158 579 aa16.35■□□□□ 0.21
FDPS-207ENST00000468479 CLASRPQ8N2M8 674 aaKnown RBP16.35■□□□□ 0.21
FDPS-207ENST00000468479 ZBTB38Q8NAP3 1195 aaPredicted RBP16.35■□□□□ 0.21
FDPS-207ENST00000468479 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
FDPS-207ENST00000468479 GPATCH3Q96I76 525 aa16.35■□□□□ 0.21
FDPS-207ENST00000468479 FZD9O00144 591 aa16.34■□□□□ 0.21
FDPS-207ENST00000468479 IRS4O14654 1257 aaPredicted RBP16.34■□□□□ 0.21
FDPS-207ENST00000468479 SF3B3Q15393 1217 aaKnown RBP16.34■□□□□ 0.21
FDPS-207ENST00000468479 TBC1D9Q6ZT07 1266 aa16.34■□□□□ 0.21
FDPS-207ENST00000468479 NIM1KQ8IY84 436 aa16.34■□□□□ 0.21
FDPS-207ENST00000468479 OTUD7AQ8TE49 926 aaPredicted RBP16.34■□□□□ 0.21
FDPS-207ENST00000468479 TTC41PQ6P2S7 1318 aa16.34■□□□□ 0.21
FDPS-207ENST00000468479 PPIP5K2O43314 1243 aa16.33■□□□□ 0.2
FDPS-207ENST00000468479 PNMA8AQ86V59 439 aaPredicted RBP16.33■□□□□ 0.2
FDPS-207ENST00000468479 MPNDQ8N594 471 aa16.33■□□□□ 0.2
FDPS-207ENST00000468479 HACL1Q9UJ83 578 aa16.33■□□□□ 0.2
FDPS-207ENST00000468479 SLC34A2O95436 690 aa16.32■□□□□ 0.2
FDPS-207ENST00000468479 PCCAP05165 728 aaPredicted RBP16.32■□□□□ 0.2
FDPS-207ENST00000468479 SDSP20132 328 aa16.32■□□□□ 0.2
FDPS-207ENST00000468479 LMOD1P29536 600 aaPredicted RBP16.32■□□□□ 0.2
FDPS-207ENST00000468479 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
FDPS-207ENST00000468479 SNED1Q8TER0 1413 aa16.32■□□□□ 0.2
FDPS-207ENST00000468479 PLA2G12BQ9BX93 195 aa16.32■□□□□ 0.2
FDPS-207ENST00000468479 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
FDPS-207ENST00000468479 C22orf23Q9BZE7 217 aa16.32■□□□□ 0.2
FDPS-207ENST00000468479 ZNF541Q9H0D2 1346 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms