RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 BSDC1Q9NW68 430 aaPredicted RBP21.73■■□□□ 1.07
SSBP1-207ENST00000468267 CLEC11AQ9Y240 323 aa21.73■■□□□ 1.07
SSBP1-207ENST00000468267 SPEF2Q9C093 1822 aa21.72■■□□□ 1.07
SSBP1-207ENST00000468267 RAD17O75943 681 aa21.72■■□□□ 1.07
SSBP1-207ENST00000468267 MRPL50Q8N5N7 158 aaKnown RBP21.72■■□□□ 1.07
SSBP1-207ENST00000468267 GPR101Q96P66 508 aaPredicted RBP21.72■■□□□ 1.07
SSBP1-207ENST00000468267 GGA1Q9UJY5 639 aa21.72■■□□□ 1.07
SSBP1-207ENST00000468267 UFL1O94874 794 aa21.71■■□□□ 1.07
SSBP1-207ENST00000468267 GMPSP49915 693 aaPredicted RBP21.71■■□□□ 1.07
SSBP1-207ENST00000468267 ZC3H12CQ9C0D7 883 aaKnown RBP21.71■■□□□ 1.07
SSBP1-207ENST00000468267 DBNDD1Q9H9R9 158 aa21.71■■□□□ 1.07
SSBP1-207ENST00000468267 GPRC5DQ9NZD1 345 aa21.71■■□□□ 1.07
SSBP1-207ENST00000468267 XDHP47989 1333 aa21.71■■□□□ 1.07
SSBP1-207ENST00000468267 DIEXFQ68CQ4 756 aaKnown RBP21.7■■□□□ 1.06
SSBP1-207ENST00000468267 MINPP1Q9UNW1 487 aa21.7■■□□□ 1.06
SSBP1-207ENST00000468267 ALDH1L1O75891 902 aa21.69■■□□□ 1.06
SSBP1-207ENST00000468267 ITGBL1O95965 494 aaPredicted RBP21.69■■□□□ 1.06
SSBP1-207ENST00000468267 ITGA6P23229 1130 aa21.69■■□□□ 1.06
SSBP1-207ENST00000468267 DOK7Q18PE1 504 aa21.69■■□□□ 1.06
SSBP1-207ENST00000468267 SLC4A10Q6U841 1118 aa21.69■■□□□ 1.06
SSBP1-207ENST00000468267 USP50Q70EL3 339 aaPredicted RBP21.69■■□□□ 1.06
SSBP1-207ENST00000468267 SSH1Q8WYL5 1049 aa21.69■■□□□ 1.06
SSBP1-207ENST00000468267 PASKQ96RG2 1323 aa21.69■■□□□ 1.06
SSBP1-207ENST00000468267 GRM8O00222 908 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 ECE2O60344 883 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 ATP2B4P23634 1241 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 FOXO4P98177 505 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 FAM161AQ3B820 660 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 KLRG1Q96E93 195 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 BCL2L13Q9BXK5 485 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 SRCIN1Q9C0H9 1055 aa21.68■■□□□ 1.06
SSBP1-207ENST00000468267 ADARB2Q9NS39 739 aaKnown RBP21.68■■□□□ 1.06
SSBP1-207ENST00000468267 SCN9AQ15858 1988 aa21.67■■□□□ 1.06
SSBP1-207ENST00000468267 PSMD14O00487 310 aa21.67■■□□□ 1.06
SSBP1-207ENST00000468267 IGHMBP2P38935 993 aaKnown RBP21.67■■□□□ 1.06
SSBP1-207ENST00000468267 MAP1SQ66K74 1059 aaPredicted RBP21.67■■□□□ 1.06
SSBP1-207ENST00000468267 MIER1Q8N108 512 aa21.67■■□□□ 1.06
SSBP1-207ENST00000468267 CNTROBQ8N137 903 aa21.67■■□□□ 1.06
SSBP1-207ENST00000468267 KCNQ5Q9NR82 932 aa21.67■■□□□ 1.06
SSBP1-207ENST00000468267 C9orf78Q9NZ63 289 aaPredicted RBP21.67■■□□□ 1.06
SSBP1-207ENST00000468267 PTPRCP08575 1304 aa21.66■■□□□ 1.06
SSBP1-207ENST00000468267 ALDH1L2Q3SY69 923 aa21.66■■□□□ 1.06
SSBP1-207ENST00000468267 WTIPA6NIX2 430 aaPredicted RBP21.65■■□□□ 1.06
SSBP1-207ENST00000468267 DPF2Q92785 391 aa21.65■■□□□ 1.06
SSBP1-207ENST00000468267 CREBZFQ9NS37 354 aa21.65■■□□□ 1.06
SSBP1-207ENST00000468267 CNOT7Q9UIV1 285 aaKnown RBP21.65■■□□□ 1.06
SSBP1-207ENST00000468267 ANKRD18BA2A2Z9 1011 aa21.64■■□□□ 1.05
SSBP1-207ENST00000468267 G3V3G9 751 aa21.64■■□□□ 1.05
SSBP1-207ENST00000468267 CT47B1P0C2W7 299 aaPredicted RBP21.64■■□□□ 1.05
SSBP1-207ENST00000468267 CCT4P50991 539 aaKnown RBP21.64■■□□□ 1.05
SSBP1-207ENST00000468267 EPHA10Q5JZY3 1008 aa21.64■■□□□ 1.05
SSBP1-207ENST00000468267 DCAF8Q5TAQ9 597 aa21.64■■□□□ 1.05
SSBP1-207ENST00000468267 MPHOSPH8Q99549 860 aa21.64■■□□□ 1.05
SSBP1-207ENST00000468267 ZBTB12Q9Y330 459 aaPredicted RBP21.64■■□□□ 1.05
SSBP1-207ENST00000468267 IFIT5Q13325 482 aaKnown RBP21.63■■□□□ 1.05
SSBP1-207ENST00000468267 LMBR1LQ6UX01 489 aa21.63■■□□□ 1.05
SSBP1-207ENST00000468267 ANKRD2Q9GZV1 360 aa21.63■■□□□ 1.05
SSBP1-207ENST00000468267 H7C1D1 291 aa21.62■■□□□ 1.05
SSBP1-207ENST00000468267 VIL1P09327 827 aaKnown RBP21.62■■□□□ 1.05
SSBP1-207ENST00000468267 RPS12P25398 132 aaKnown RBP21.62■■□□□ 1.05
SSBP1-207ENST00000468267 JMYQ8N9B5 988 aa21.62■■□□□ 1.05
SSBP1-207ENST00000468267 LEMD3Q9Y2U8 911 aa21.62■■□□□ 1.05
SSBP1-207ENST00000468267 PSME4Q14997 1843 aa21.62■■□□□ 1.05
SSBP1-207ENST00000468267 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
SSBP1-207ENST00000468267 UTYO14607 1347 aa21.61■■□□□ 1.05
SSBP1-207ENST00000468267 SHTN1A0MZ66 631 aa21.61■■□□□ 1.05
SSBP1-207ENST00000468267 MICALL2Q8IY33 904 aa21.61■■□□□ 1.05
SSBP1-207ENST00000468267 SMC4Q9NTJ3 1288 aa21.61■■□□□ 1.05
SSBP1-207ENST00000468267 CHMP3Q9Y3E7 222 aa21.61■■□□□ 1.05
SSBP1-207ENST00000468267 TMEM88BA6NKF7 163 aa21.6■■□□□ 1.05
SSBP1-207ENST00000468267 NBPF7P0C2Y1 421 aaPredicted RBP21.6■■□□□ 1.05
SSBP1-207ENST00000468267 HIRAP54198 1017 aaPredicted RBP21.6■■□□□ 1.05
SSBP1-207ENST00000468267 PODNQ7Z5L7 613 aa21.6■■□□□ 1.05
SSBP1-207ENST00000468267 PGAP2Q9UHJ9 254 aa21.6■■□□□ 1.05
SSBP1-207ENST00000468267 CHRNDQ07001 517 aa21.59■■□□□ 1.05
SSBP1-207ENST00000468267 CCDC57Q2TAC2 916 aa21.59■■□□□ 1.05
SSBP1-207ENST00000468267 PPP4R3CPQ6ZMV5 832 aa21.59■■□□□ 1.05
SSBP1-207ENST00000468267 TRPM4Q8TD43 1214 aa21.59■■□□□ 1.05
SSBP1-207ENST00000468267 ZC3H15Q8WU90 426 aaKnown RBP21.59■■□□□ 1.05
SSBP1-207ENST00000468267 KAZALD1Q96I82 304 aa21.59■■□□□ 1.05
SSBP1-207ENST00000468267 SUCLG2Q96I99 432 aa21.59■■□□□ 1.05
SSBP1-207ENST00000468267 ZNF804BA4D1E1 1349 aa21.58■■□□□ 1.05
SSBP1-207ENST00000468267 TRPM7Q96QT4 1865 aa21.58■■□□□ 1.04
SSBP1-207ENST00000468267 POLR2AP24928 1970 aaKnown RBP21.57■■□□□ 1.04
SSBP1-207ENST00000468267 BRPF1P55201 1214 aaPredicted RBP21.57■■□□□ 1.04
SSBP1-207ENST00000468267 USP17L3A6NCW0 530 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 USP17L4A6NCW7 530 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
SSBP1-207ENST00000468267 USP17L1Q7RTZ2 530 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 SAMD7Q7Z3H4 446 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 TXNRD3Q86VQ6 643 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 AGBL3Q8NEM8 1001 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 ZNF594Q96JF6 807 aaPredicted RBP21.56■■□□□ 1.04
SSBP1-207ENST00000468267 COA1Q9GZY4 146 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
SSBP1-207ENST00000468267 ZNF609O15014 1411 aa21.55■■□□□ 1.04
SSBP1-207ENST00000468267 KCNJ4P48050 445 aa21.55■■□□□ 1.04
SSBP1-207ENST00000468267 FMR1Q06787 632 aaKnown RBP eCLIP21.55■■□□□ 1.04
SSBP1-207ENST00000468267 TAF7LQ5H9L4 462 aa21.55■■□□□ 1.04
SSBP1-207ENST00000468267 LDHAL6AQ6ZMR3 332 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms