RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 GGA1Q9UJY5 639 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 COL4A1P02462 1669 aa17.06■□□□□ 0.32
SSBP1-206ENST00000467681 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 XDHP47989 1333 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 PPIP5K2O43314 1243 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 ATP2B4P23634 1241 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 KIAA2012Q0VF49 1180 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 LDHAL6AQ6ZMR3 332 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
SSBP1-206ENST00000467681 MYH3P11055 1940 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 FZD9O00144 591 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 GNAI2P04899 355 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 RFX5P48382 616 aaPredicted RBP17.04■□□□□ 0.32
SSBP1-206ENST00000467681 AOC3Q16853 763 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 WASHC4Q2M389 1173 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 DPY19L2Q6NUT2 758 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 POTEDQ86YR6 584 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.04■□□□□ 0.32
SSBP1-206ENST00000467681 EYA3Q99504 573 aa17.04■□□□□ 0.32
SSBP1-206ENST00000467681 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 UFL1O94874 794 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 CHRNDQ07001 517 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 PDE3AQ14432 1141 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 PUS3Q9BZE2 481 aaKnown RBP17.03■□□□□ 0.32
SSBP1-206ENST00000467681 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
SSBP1-206ENST00000467681 CNNM1Q9NRU3 951 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 LEMD3Q9Y2U8 911 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 RIPOR2Q9Y4F9 1068 aa17.03■□□□□ 0.32
SSBP1-206ENST00000467681 CCDC88AQ3V6T2 1871 aa17.02■□□□□ 0.32
SSBP1-206ENST00000467681 WTIPA6NIX2 430 aaPredicted RBP17.02■□□□□ 0.32
SSBP1-206ENST00000467681 RIMBP2O15034 1052 aa17.02■□□□□ 0.32
SSBP1-206ENST00000467681 NIM1KQ8IY84 436 aa17.02■□□□□ 0.32
SSBP1-206ENST00000467681 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
SSBP1-206ENST00000467681 MTX1Q13505 466 aa17.01■□□□□ 0.31
SSBP1-206ENST00000467681 HELBQ8NG08 1087 aaPredicted RBP17.01■□□□□ 0.31
SSBP1-206ENST00000467681 ZNF526Q8TF50 670 aaPredicted RBP17.01■□□□□ 0.31
SSBP1-206ENST00000467681 GPR101Q96P66 508 aaPredicted RBP17.01■□□□□ 0.31
SSBP1-206ENST00000467681 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
SSBP1-206ENST00000467681 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
SSBP1-206ENST00000467681 EIF6P56537 245 aaKnown RBP17■□□□□ 0.31
SSBP1-206ENST00000467681 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
SSBP1-206ENST00000467681 MVPQ14764 893 aaKnown RBP17■□□□□ 0.31
SSBP1-206ENST00000467681 KLHDC4Q8TBB5 520 aa17■□□□□ 0.31
SSBP1-206ENST00000467681 COG6Q9Y2V7 657 aa17■□□□□ 0.31
SSBP1-206ENST00000467681 ZNF804BA4D1E1 1349 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 EYA2O00167 538 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 TAF5LO75529 589 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 DDNO94850 711 aaPredicted RBP16.99■□□□□ 0.31
SSBP1-206ENST00000467681 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 LRRC24Q50LG9 513 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 C20orf194Q5TEA3 1177 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 COPRSQ9NQ92 184 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
SSBP1-206ENST00000467681 MROH5Q6ZUA9 1318 aa16.98■□□□□ 0.31
SSBP1-206ENST00000467681 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
SSBP1-206ENST00000467681 DOK7Q18PE1 504 aa16.98■□□□□ 0.31
SSBP1-206ENST00000467681 RRAGCQ9HB90 399 aa16.98■□□□□ 0.31
SSBP1-206ENST00000467681 DICER1Q9UPY3 1922 aaKnown RBP16.98■□□□□ 0.31
SSBP1-206ENST00000467681 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 SNAP23O00161 211 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 CIAO1O76071 339 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 KCNJ4P48050 445 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 CXCL9Q07325 125 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 C15orf52Q6ZUT6 534 aaKnown RBP16.97■□□□□ 0.31
SSBP1-206ENST00000467681 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
SSBP1-206ENST00000467681 DBNDD1Q9H9R9 158 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 NMRK2Q9NPI5 230 aa16.97■□□□□ 0.31
SSBP1-206ENST00000467681 YDJCA8MPS7 323 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 G3V3G9 751 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 UBE4AQ14139 1066 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 ATG9AQ7Z3C6 839 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 TXNRD3Q86VQ6 643 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 GPC2Q8N158 579 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 C1orf115Q9H7X2 142 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 ZBTB40Q9NUA8 1239 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
SSBP1-206ENST00000467681 DUOX1Q9NRD9 1551 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 COL4A5P29400 1685 aa16.96■□□□□ 0.31
SSBP1-206ENST00000467681 PNMA6EA0A0J9YXQ4 647 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 POTECB2RU33 542 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 ECE2O60344 883 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 PDE8BO95263 885 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 VEGFAP15692 232 aaPredicted RBP16.95■□□□□ 0.3
SSBP1-206ENST00000467681 POLA2Q14181 598 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 TNIP1Q15025 636 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 METTL24Q5JXM2 366 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 CIAPIN1Q6FI81 312 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 PODNQ7Z5L7 613 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 L3MBTL3Q96JM7 780 aaPredicted RBP16.95■□□□□ 0.3
SSBP1-206ENST00000467681 KCNQ5Q9NR82 932 aa16.95■□□□□ 0.3
SSBP1-206ENST00000467681 MED23Q9ULK4 1368 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 KIF3CO14782 793 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 RAD17O75943 681 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 KLRK1P26718 216 aa16.94■□□□□ 0.3
SSBP1-206ENST00000467681 RRP1P56182 461 aaKnown RBP16.94■□□□□ 0.3
SSBP1-206ENST00000467681 VGLL2Q8N8G2 317 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms