RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RIMBP2O15034 1052 aa17.11■□□□□ 0.33
UBR4-210ENST00000466969 GPTP24298 496 aa17.11■□□□□ 0.33
UBR4-210ENST00000466969 SUSD4Q5VX71 490 aa17.11■□□□□ 0.33
UBR4-210ENST00000466969 SH3TC2Q8TF17 1288 aa17.11■□□□□ 0.33
UBR4-210ENST00000466969 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
UBR4-210ENST00000466969 NBPF26B4DH59 902 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 KCNQ3O43525 872 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 ECE2O60344 883 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 EVI5O60447 810 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 SNRPA1P09661 255 aaKnown RBP17.1■□□□□ 0.33
UBR4-210ENST00000466969 NBPF10Q6P3W6 841 aaKnown RBP17.1■□□□□ 0.33
UBR4-210ENST00000466969 SHISA4Q96DD7 197 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 KCNQ5Q9NR82 932 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 RAPGEFL1Q9UHV5 662 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 RTL9Q8NET4 1388 aa17.1■□□□□ 0.33
UBR4-210ENST00000466969 ERVV-1B6SEH8 477 aa17.09■□□□□ 0.33
UBR4-210ENST00000466969 CAP1Q01518 475 aa17.09■□□□□ 0.33
UBR4-210ENST00000466969 PRKG1Q13976 671 aa17.09■□□□□ 0.33
UBR4-210ENST00000466969 IL17REQ8NFR9 667 aa17.09■□□□□ 0.33
UBR4-210ENST00000466969 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.09■□□□□ 0.33
UBR4-210ENST00000466969 UBN2Q6ZU65 1347 aa17.08■□□□□ 0.32
UBR4-210ENST00000466969 RPTORQ8N122 1335 aa17.08■□□□□ 0.32
UBR4-210ENST00000466969 VIL1P09327 827 aaKnown RBP17.08■□□□□ 0.32
UBR4-210ENST00000466969 ZNF280AP59817 542 aaPredicted RBP17.08■□□□□ 0.32
UBR4-210ENST00000466969 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.32
UBR4-210ENST00000466969 NECTIN2Q92692 538 aa17.08■□□□□ 0.32
UBR4-210ENST00000466969 SLC10A4Q96EP9 437 aa17.08■□□□□ 0.32
UBR4-210ENST00000466969 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
UBR4-210ENST00000466969 NTSR2O95665 410 aa17.07■□□□□ 0.32
UBR4-210ENST00000466969 ZBTB48P10074 688 aaPredicted RBP17.07■□□□□ 0.32
UBR4-210ENST00000466969 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
UBR4-210ENST00000466969 DOK7Q18PE1 504 aa17.07■□□□□ 0.32
UBR4-210ENST00000466969 DDX46Q7L014 1031 aaKnown RBP17.07■□□□□ 0.32
UBR4-210ENST00000466969 NGEFQ8N5V2 710 aa17.07■□□□□ 0.32
UBR4-210ENST00000466969 SYMPKQ92797 1274 aaKnown RBP17.07■□□□□ 0.32
UBR4-210ENST00000466969 MYOZ2Q9NPC6 264 aa17.07■□□□□ 0.32
UBR4-210ENST00000466969 LAMB4A4D0S4 1761 aa17.07■□□□□ 0.32
UBR4-210ENST00000466969 C6orf229H3BNL8 230 aa17.06■□□□□ 0.32
UBR4-210ENST00000466969 LRIT3Q3SXY7 679 aa17.06■□□□□ 0.32
UBR4-210ENST00000466969 KIF6Q6ZMV9 814 aa17.06■□□□□ 0.32
UBR4-210ENST00000466969 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
UBR4-210ENST00000466969 MAP3K15Q6ZN16 1313 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 LDLRAD1Q5T700 205 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 TMC4Q7Z404 712 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 UBE2Q1Q7Z7E8 422 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 AGBL3Q8NEM8 1001 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 EYA3Q99504 573 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 ANGEL1Q9UNK9 670 aaKnown RBP17.05■□□□□ 0.32
UBR4-210ENST00000466969 NSFL1CQ9UNZ2 370 aaKnown RBP17.05■□□□□ 0.32
UBR4-210ENST00000466969 DUOX1Q9NRD9 1551 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 NUP98P52948 1817 aa17.05■□□□□ 0.32
UBR4-210ENST00000466969 G3V3G9 751 aa17.04■□□□□ 0.32
UBR4-210ENST00000466969 BMP8BP34820 402 aa17.04■□□□□ 0.32
UBR4-210ENST00000466969 GRAPQ13588 217 aa17.04■□□□□ 0.32
UBR4-210ENST00000466969 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
UBR4-210ENST00000466969 GRAPLQ8TC17 118 aaPredicted RBP17.04■□□□□ 0.32
UBR4-210ENST00000466969 TTC28Q96AY4 2481 aa17.04■□□□□ 0.32
UBR4-210ENST00000466969 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
UBR4-210ENST00000466969 GJA8P48165 433 aa17.03■□□□□ 0.32
UBR4-210ENST00000466969 MTFR1Q15390 333 aa17.03■□□□□ 0.32
UBR4-210ENST00000466969 MORC1Q86VD1 984 aa17.03■□□□□ 0.32
UBR4-210ENST00000466969 DDX60Q8IY21 1712 aaKnown RBP17.02■□□□□ 0.32
UBR4-210ENST00000466969 BCAMP50895 628 aa17.02■□□□□ 0.32
UBR4-210ENST00000466969 SLC10A5Q5PT55 438 aa17.02■□□□□ 0.32
UBR4-210ENST00000466969 RSBN1LQ6PCB5 846 aaPredicted RBP17.02■□□□□ 0.32
UBR4-210ENST00000466969 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
UBR4-210ENST00000466969 WNK4Q96J92 1243 aa17.02■□□□□ 0.32
UBR4-210ENST00000466969 TAF1P21675 1872 aa17.01■□□□□ 0.31
UBR4-210ENST00000466969 MUC3AQ02505 3323 aa17.01■□□□□ 0.31
UBR4-210ENST00000466969 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
UBR4-210ENST00000466969 PARP10Q53GL7 1025 aa17.01■□□□□ 0.31
UBR4-210ENST00000466969 ZNF34Q8IZ26 560 aa17.01■□□□□ 0.31
UBR4-210ENST00000466969 GDF15Q99988 308 aa17.01■□□□□ 0.31
UBR4-210ENST00000466969 GJB1P08034 283 aa17■□□□□ 0.31
UBR4-210ENST00000466969 KIF22Q14807 665 aa17■□□□□ 0.31
UBR4-210ENST00000466969 UTP14AQ9BVJ6 771 aaKnown RBP17■□□□□ 0.31
UBR4-210ENST00000466969 ZBTB3Q9H5J0 574 aa17■□□□□ 0.31
UBR4-210ENST00000466969 ZNF646O15015 1829 aaPredicted RBP17■□□□□ 0.31
UBR4-210ENST00000466969 TMEM265A0A087WTH1 108 aa16.99■□□□□ 0.31
UBR4-210ENST00000466969 NBPF9Q3BBW0 867 aa16.99■□□□□ 0.31
UBR4-210ENST00000466969 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
UBR4-210ENST00000466969 POLLQ9UGP5 575 aa16.99■□□□□ 0.31
UBR4-210ENST00000466969 EYSQ5T1H1 3165 aa16.99■□□□□ 0.31
UBR4-210ENST00000466969 IRS2Q9Y4H2 1338 aa16.98■□□□□ 0.31
UBR4-210ENST00000466969 PRMT2P55345 433 aa16.98■□□□□ 0.31
UBR4-210ENST00000466969 TTLL7Q6ZT98 887 aa16.98■□□□□ 0.31
UBR4-210ENST00000466969 TDHQ8IZJ6 230 aa16.98■□□□□ 0.31
UBR4-210ENST00000466969 ZFYVE28Q9HCC9 887 aa16.98■□□□□ 0.31
UBR4-210ENST00000466969 TNFRSF10AO00220 468 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 GNRH1P01148 92 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 GUCD1Q96NT3 240 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 PTPN18Q99952 460 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 RNF208Q9H0X6 261 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 SCN9AQ15858 1988 aa16.97■□□□□ 0.31
UBR4-210ENST00000466969 TAF1CQ15572 869 aaPredicted RBP16.96■□□□□ 0.31
UBR4-210ENST00000466969 CLMNQ96JQ2 1002 aa16.96■□□□□ 0.31
UBR4-210ENST00000466969 FZD1Q9UP38 647 aa16.96■□□□□ 0.31
UBR4-210ENST00000466969 CCL5P13501 91 aa16.95■□□□□ 0.3
UBR4-210ENST00000466969 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms