RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 CMTR1Q8N1G2 835 aaKnown RBP6.32□□□□□ -1.4
CD55-207ENST00000465534 TRIM33Q9UPN9 1127 aa6.32□□□□□ -1.4
CD55-207ENST00000465534 RNF114Q9Y508 228 aa6.32□□□□□ -1.4
CD55-207ENST00000465534 UNC13AQ9UPW8 1703 aa6.31□□□□□ -1.4
CD55-207ENST00000465534 MMP20O60882 483 aa6.31□□□□□ -1.4
CD55-207ENST00000465534 ADAMTS4O75173 837 aa6.31□□□□□ -1.4
CD55-207ENST00000465534 DCAF11Q8TEB1 546 aa6.31□□□□□ -1.4
CD55-207ENST00000465534 RBSNQ9H1K0 784 aa6.31□□□□□ -1.4
CD55-207ENST00000465534 DHX15O43143 795 aaKnown RBP6.3□□□□□ -1.4
CD55-207ENST00000465534 ZDHHC13Q8IUH4 622 aa6.3□□□□□ -1.4
CD55-207ENST00000465534 ARMC10Q8N2F6 343 aa6.3□□□□□ -1.4
CD55-207ENST00000465534 VTI1AQ96AJ9 217 aa6.3□□□□□ -1.4
CD55-207ENST00000465534 WISP1O95388 367 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 TREML1Q86YW5 311 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 GALNT11Q8NCW6 608 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 MYO19Q96H55 970 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 LRFN2Q9ULH4 789 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 PPME1Q9Y570 386 aa6.29□□□□□ -1.4
CD55-207ENST00000465534 USP17L15C9J2P7 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L10C9JJH3 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L13C9JLJ4 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L12C9JPN9 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L11C9JVI0 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L21D6R901 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L18D6R9N7 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L22D6RA61 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L17D6RBQ6 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L19D6RCP7 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L20D6RJB6 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 FOXO3O43524 673 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 SOX18P35713 384 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 USP17L24Q0WX57 530 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 NFIAQ12857 509 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 GLMNQ92990 594 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 KCNMB2Q9Y691 235 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 BAZ1AQ9NRL2 1556 aaPredicted RBP6.28□□□□□ -1.4
CD55-207ENST00000465534 LINC01387J3KSC0 135 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 SLC24A1O60721 1099 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 HOXD8P13378 290 aaPredicted RBP6.28□□□□□ -1.4
CD55-207ENST00000465534 SPINK2P20155 84 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 WEE1P30291 646 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 KANK4Q5T7N3 995 aaPredicted RBP6.28□□□□□ -1.4
CD55-207ENST00000465534 ACAD11Q709F0 780 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 MUC3BQ9H195 1237 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
CD55-207ENST00000465534 GRIK1P39086 918 aa6.27□□□□□ -1.41
CD55-207ENST00000465534 FLIIQ13045 1269 aa6.27□□□□□ -1.41
CD55-207ENST00000465534 INTS5Q6P9B9 1019 aaKnown RBP6.27□□□□□ -1.41
CD55-207ENST00000465534 TXNDC11Q6PKC3 985 aa6.27□□□□□ -1.41
CD55-207ENST00000465534 TRIM42Q8IWZ5 723 aa6.27□□□□□ -1.41
CD55-207ENST00000465534 UTP4Q969X6 686 aaKnown RBP6.27□□□□□ -1.41
CD55-207ENST00000465534 CEP41Q9BYV8 373 aa6.27□□□□□ -1.41
CD55-207ENST00000465534 KCNK4Q9NYG8 393 aa6.27□□□□□ -1.41
CD55-207ENST00000465534 HMX2A2RU54 273 aa6.26□□□□□ -1.41
CD55-207ENST00000465534 FAM196BA6NMK8 535 aa6.26□□□□□ -1.41
CD55-207ENST00000465534 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
CD55-207ENST00000465534 CACTIN-AS1Q8N1I8 211 aa6.26□□□□□ -1.41
CD55-207ENST00000465534 LACRTQ9GZZ8 138 aa6.26□□□□□ -1.41
CD55-207ENST00000465534 ARID1BQ8NFD5 2236 aaPredicted RBP6.25□□□□□ -1.41
CD55-207ENST00000465534 PRR19A6NJB7 356 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 CDC25BP30305 580 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 FZD5Q13467 585 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 LCE1DQ5T752 114 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 RNF43Q68DV7 783 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 DTX1Q86Y01 620 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 DBNDD2Q9BQY9 259 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 HECW2Q9P2P5 1572 aa6.25□□□□□ -1.41
CD55-207ENST00000465534 EIF4G1Q04637 1599 aaKnown RBP6.24□□□□□ -1.41
CD55-207ENST00000465534 WNT11O96014 354 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 ATP11AP98196 1134 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 UVSSAQ2YD98 709 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 NLRP13Q86W25 1043 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 FAM46AQ96IP4 442 aaKnown RBP6.24□□□□□ -1.41
CD55-207ENST00000465534 ARXQ96QS3 562 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 CARD10Q9BWT7 1032 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 PPP1R12CQ9BZL4 782 aa6.24□□□□□ -1.41
CD55-207ENST00000465534 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.24□□□□□ -1.411e-6■■■■■ 126.8
CD55-207ENST00000465534 BICRAQ9NZM4 1560 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 TRIP4Q15650 581 aaPredicted RBP6.23□□□□□ -1.41
CD55-207ENST00000465534 COX20Q5RI15 118 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 COL13A1Q5TAT6 717 aaPredicted RBP6.23□□□□□ -1.41
CD55-207ENST00000465534 CEP135Q66GS9 1140 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 KIAA1211Q6ZU35 1233 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 MYRFLQ96LU7 910 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 VRTNQ9H8Y1 702 aa6.23□□□□□ -1.41
CD55-207ENST00000465534 TM4SF5O14894 197 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 CDC27P30260 824 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 CCDC180Q9P1Z9 1646 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 ARHGEF11O15085 1522 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 FSCN2O14926 492 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 DDX3YO15523 660 aaKnown RBP6.22□□□□□ -1.41
CD55-207ENST00000465534 LMOD1P29536 600 aaPredicted RBP6.22□□□□□ -1.41
CD55-207ENST00000465534 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 ADAMTSL4Q6UY14 1074 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 ETFBKMTQ8IXQ9 262 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 OR13H1Q8NG92 308 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 SHKBP1Q8TBC3 707 aa6.22□□□□□ -1.41
CD55-207ENST00000465534 SPACA7Q96KW9 195 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms