RNA–Protein interactions for RNA: ENST00000464053.1

GYPC-205, Transcript of glycophorin C (Gerbich blood group), humanhuman

TSL 1 (best)

Gene GYPC, Length 1,805 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-205ENST00000464053 MPHOSPH8Q99549 860 aa18.9■□□□□ 0.62
GYPC-205ENST00000464053 A0A1B0GUL7 405 aa18.89■□□□□ 0.61
GYPC-205ENST00000464053 HELBQ8NG08 1087 aaPredicted RBP18.89■□□□□ 0.61
GYPC-205ENST00000464053 CELF1Q92879 486 aaKnown RBP18.89■□□□□ 0.61
GYPC-205ENST00000464053 GPATCH3Q96I76 525 aa18.89■□□□□ 0.61
GYPC-205ENST00000464053 CDC5LQ99459 802 aaKnown RBP18.89■□□□□ 0.61
GYPC-205ENST00000464053 TRIM6-TRIM34B2RNG4 842 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 TBC1D9Q6ZT07 1266 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 PDGFDQ9GZP0 370 aaPredicted RBP18.88■□□□□ 0.61
GYPC-205ENST00000464053 NRXN2Q9P2S2 1712 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 ERC2O15083 957 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 GLRX3O76003 335 aaKnown RBP18.88■□□□□ 0.61
GYPC-205ENST00000464053 MMP10P09238 476 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 ST5P78524 1137 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 ANKRD18AQ8IVF6 992 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 RILPL2Q969X0 211 aa18.88■□□□□ 0.61
GYPC-205ENST00000464053 MROH5Q6ZUA9 1318 aa18.87■□□□□ 0.61
GYPC-205ENST00000464053 AK9Q5TCS8 1911 aa18.87■□□□□ 0.61
GYPC-205ENST00000464053 CDC45O75419 566 aa18.87■□□□□ 0.61
GYPC-205ENST00000464053 PDE8BO95263 885 aa18.87■□□□□ 0.61
GYPC-205ENST00000464053 AKAP2Q9Y2D5 859 aa18.87■□□□□ 0.61
GYPC-205ENST00000464053 TAF5LO75529 589 aa18.86■□□□□ 0.61
GYPC-205ENST00000464053 ADORA1P30542 326 aa18.86■□□□□ 0.61
GYPC-205ENST00000464053 ANKRD31Q8N7Z5 1873 aa18.86■□□□□ 0.61
GYPC-205ENST00000464053 ATP2B3Q16720 1220 aa18.86■□□□□ 0.61
GYPC-205ENST00000464053 BOLA2Q9H3K6 86 aa18.86■□□□□ 0.61
GYPC-205ENST00000464053 A0A1B0GUL6 1792 aa18.85■□□□□ 0.61
GYPC-205ENST00000464053 SNAP23O00161 211 aa18.85■□□□□ 0.61
GYPC-205ENST00000464053 DDX46Q7L014 1031 aaKnown RBP18.85■□□□□ 0.61
GYPC-205ENST00000464053 XAGE2Q96GT9 111 aa18.85■□□□□ 0.61
GYPC-205ENST00000464053 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
GYPC-205ENST00000464053 ATP5JP18859 108 aa18.84■□□□□ 0.61
GYPC-205ENST00000464053 RPS8P62241 208 aaKnown RBP18.84■□□□□ 0.61
GYPC-205ENST00000464053 CHRNDQ07001 517 aa18.84■□□□□ 0.61
GYPC-205ENST00000464053 PARP3Q9Y6F1 533 aa18.84■□□□□ 0.61
GYPC-205ENST00000464053 CRY2Q49AN0 593 aa18.84■□□□□ 0.61
GYPC-205ENST00000464053 NDUFB9Q9Y6M9 179 aa18.84■□□□□ 0.61
GYPC-205ENST00000464053 FGFR2P21802 821 aa18.83■□□□□ 0.6
GYPC-205ENST00000464053 MINPP1Q9UNW1 487 aa18.83■□□□□ 0.6
GYPC-205ENST00000464053 MFAP1P55081 439 aaKnown RBP18.82■□□□□ 0.6
GYPC-205ENST00000464053 PUM3Q15397 648 aaKnown RBP18.82■□□□□ 0.6
GYPC-205ENST00000464053 SLC51AQ86UW1 340 aa18.82■□□□□ 0.6
GYPC-205ENST00000464053 CNTROBQ8N137 903 aa18.82■□□□□ 0.6
GYPC-205ENST00000464053 ARAP2Q8WZ64 1704 aa18.82■□□□□ 0.6
GYPC-205ENST00000464053 KLRG2A4D1S0 409 aaPredicted RBP18.81■□□□□ 0.6
GYPC-205ENST00000464053 UPF1Q92900 1129 aaKnown RBP eCLIP18.81■□□□□ 0.62e-12■■■□□ 16.5
GYPC-205ENST00000464053 EDC3Q96F86 508 aaKnown RBP18.81■□□□□ 0.6
GYPC-205ENST00000464053 WTIPA6NIX2 430 aaPredicted RBP18.81■□□□□ 0.6
GYPC-205ENST00000464053 GRAPQ13588 217 aa18.81■□□□□ 0.6
GYPC-205ENST00000464053 GRAPLQ8TC17 118 aaPredicted RBP18.81■□□□□ 0.6
GYPC-205ENST00000464053 RPGRQ92834 1020 aaKnown RBP18.81■□□□□ 0.6
GYPC-205ENST00000464053 CHMLP26374 656 aa18.8■□□□□ 0.6
GYPC-205ENST00000464053 GORABQ5T7V8 394 aa18.8■□□□□ 0.6
GYPC-205ENST00000464053 LPIN2Q92539 896 aa18.8■□□□□ 0.6
GYPC-205ENST00000464053 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
GYPC-205ENST00000464053 EVI5LQ96CN4 794 aa18.79■□□□□ 0.6
GYPC-205ENST00000464053 HAUS7Q99871 368 aa18.79■□□□□ 0.6
GYPC-205ENST00000464053 CCDC158Q5M9N0 1113 aa18.79■□□□□ 0.6
GYPC-205ENST00000464053 DNAJC2Q99543 621 aaKnown RBP18.79■□□□□ 0.6
GYPC-205ENST00000464053 SLC5A1P13866 664 aa18.78■□□□□ 0.6
GYPC-205ENST00000464053 HOXA10P31260 410 aaPredicted RBP18.78■□□□□ 0.6
GYPC-205ENST00000464053 TTC39AQ5SRH9 613 aa18.78■□□□□ 0.6
GYPC-205ENST00000464053 CASC1Q6TDU7 716 aa18.78■□□□□ 0.6
GYPC-205ENST00000464053 RBM17Q96I25 401 aaKnown RBP18.78■□□□□ 0.6
GYPC-205ENST00000464053 COL11A2P13942 1736 aaPredicted RBP18.78■□□□□ 0.6
GYPC-205ENST00000464053 IFIT1P09914 478 aaKnown RBP18.77■□□□□ 0.6
GYPC-205ENST00000464053 SCARF1Q14162 830 aa18.77■□□□□ 0.6
GYPC-205ENST00000464053 PHKA1P46020 1223 aa18.77■□□□□ 0.59
GYPC-205ENST00000464053 AKAP11Q9UKA4 1901 aa18.76■□□□□ 0.59
GYPC-205ENST00000464053 SRGNP10124 158 aa18.76■□□□□ 0.59
GYPC-205ENST00000464053 CCDC102BQ68D86 513 aa18.76■□□□□ 0.59
GYPC-205ENST00000464053 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.76■□□□□ 0.59
GYPC-205ENST00000464053 IL25Q9H293 177 aa18.76■□□□□ 0.59
GYPC-205ENST00000464053 SNRKQ9NRH2 765 aa18.76■□□□□ 0.59
GYPC-205ENST00000464053 PDE6BP35913 854 aa18.75■□□□□ 0.59
GYPC-205ENST00000464053 PI16Q6UXB8 463 aa18.75■□□□□ 0.59
GYPC-205ENST00000464053 CRAMP1Q96RY5 1269 aa18.75■□□□□ 0.59
GYPC-205ENST00000464053 ESYT1Q9BSJ8 1104 aa18.75■□□□□ 0.59
GYPC-205ENST00000464053 UPF2Q9HAU5 1272 aaKnown RBP18.75■□□□□ 0.59
GYPC-205ENST00000464053 GOLIM4O00461 696 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 UBE4AQ14139 1066 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 FSD1Q9BTV5 496 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 PAG1Q9NWQ8 432 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 MCAMP43121 646 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 BCAMP50895 628 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 SLC16A10Q8TF71 515 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 ZNF512BQ96KM6 892 aaPredicted RBP18.74■□□□□ 0.59
GYPC-205ENST00000464053 TBC1D32Q96NH3 1257 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
GYPC-205ENST00000464053 ARID4AP29374 1257 aaPredicted RBP18.73■□□□□ 0.59
GYPC-205ENST00000464053 FKBP4Q02790 459 aaKnown RBP eCLIP18.73■□□□□ 0.59
GYPC-205ENST00000464053 C22orf23Q9BZE7 217 aa18.73■□□□□ 0.59
GYPC-205ENST00000464053 BBOX1O75936 387 aa18.72■□□□□ 0.59
GYPC-205ENST00000464053 CHGBP05060 677 aa18.72■□□□□ 0.59
GYPC-205ENST00000464053 NPR1P16066 1061 aa18.72■□□□□ 0.59
GYPC-205ENST00000464053 KLRK1P26718 216 aa18.72■□□□□ 0.59
GYPC-205ENST00000464053 ZAP70P43403 619 aa18.72■□□□□ 0.59
GYPC-205ENST00000464053 CWC27Q6UX04 472 aaKnown RBP18.72■□□□□ 0.59
GYPC-205ENST00000464053 GYG1P46976 350 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms