RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ZNF521Q96K83 1311 aa24.59■■□□□ 1.53
CCHCR1-210ENST00000464012 F6X3S4 739 aa24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 H7C1W4 665 aa24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 ECE2O60344 883 aa24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 USP50Q70EL3 339 aaPredicted RBP24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 LINS1Q8NG48 757 aa24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 CDC5LQ99459 802 aaKnown RBP24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 ADARB2Q9NS39 739 aaKnown RBP24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 GGA1Q9UJY5 639 aa24.58■■□□□ 1.53
CCHCR1-210ENST00000464012 PSME4Q14997 1843 aa24.57■■□□□ 1.52
CCHCR1-210ENST00000464012 PODXL2Q9NZ53 605 aa24.57■■□□□ 1.52
CCHCR1-210ENST00000464012 TMEM88BA6NKF7 163 aa24.56■■□□□ 1.52
CCHCR1-210ENST00000464012 PSMD14O00487 310 aa24.56■■□□□ 1.52
CCHCR1-210ENST00000464012 ZC3H12CQ9C0D7 883 aaKnown RBP24.56■■□□□ 1.52
CCHCR1-210ENST00000464012 ZBTB12Q9Y330 459 aaPredicted RBP24.56■■□□□ 1.52
CCHCR1-210ENST00000464012 SHTN1A0MZ66 631 aa24.55■■□□□ 1.52
CCHCR1-210ENST00000464012 G3V3G9 751 aa24.55■■□□□ 1.52
CCHCR1-210ENST00000464012 DCAF8Q5TAQ9 597 aa24.55■■□□□ 1.52
CCHCR1-210ENST00000464012 XDHP47989 1333 aa24.55■■□□□ 1.52
CCHCR1-210ENST00000464012 RTL9Q8NET4 1388 aa24.54■■□□□ 1.52
CCHCR1-210ENST00000464012 KCNQ5Q9NR82 932 aa24.54■■□□□ 1.52
CCHCR1-210ENST00000464012 CASP7P55210 303 aa24.53■■□□□ 1.52
CCHCR1-210ENST00000464012 FMR1Q06787 632 aaKnown RBP eCLIP24.53■■□□□ 1.526e-7■■□□□ 13.9
CCHCR1-210ENST00000464012 FAM161AQ3B820 660 aa24.53■■□□□ 1.52
CCHCR1-210ENST00000464012 MICALL2Q8IY33 904 aa24.53■■□□□ 1.52
CCHCR1-210ENST00000464012 CNOT7Q9UIV1 285 aaKnown RBP24.53■■□□□ 1.52
CCHCR1-210ENST00000464012 A0A1B0GUL6 1792 aa24.52■■□□□ 1.52
CCHCR1-210ENST00000464012 TRPM4Q8TD43 1214 aa24.52■■□□□ 1.52
CCHCR1-210ENST00000464012 PLA2G12BQ9BX93 195 aa24.52■■□□□ 1.52
CCHCR1-210ENST00000464012 CNTNAP1P78357 1384 aa24.52■■□□□ 1.52
CCHCR1-210ENST00000464012 ITGA6P23229 1130 aa24.51■■□□□ 1.51
CCHCR1-210ENST00000464012 IGHMBP2P38935 993 aaKnown RBP24.51■■□□□ 1.51
CCHCR1-210ENST00000464012 BEND3Q5T5X7 828 aa24.51■■□□□ 1.51
CCHCR1-210ENST00000464012 BSDC1Q9NW68 430 aaPredicted RBP24.51■■□□□ 1.51
CCHCR1-210ENST00000464012 TRAF5O00463 557 aa24.5■■□□□ 1.51
CCHCR1-210ENST00000464012 ATP2B4P23634 1241 aa24.5■■□□□ 1.51
CCHCR1-210ENST00000464012 SLC4A10Q6U841 1118 aa24.5■■□□□ 1.51
CCHCR1-210ENST00000464012 H7C1D1 291 aa24.49■■□□□ 1.51
CCHCR1-210ENST00000464012 MINPP1Q9UNW1 487 aa24.49■■□□□ 1.51
CCHCR1-210ENST00000464012 POLR2AP24928 1970 aaKnown RBP24.49■■□□□ 1.51
CCHCR1-210ENST00000464012 WTIPA6NIX2 430 aaPredicted RBP24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 E9PSI1 815 aa24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 HSPA1AP0DMV8 641 aaKnown RBP24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 HSPA1BP0DMV9 641 aaKnown RBP24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 HIRAP54198 1017 aaPredicted RBP24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 ABT1Q9ULW3 272 aaKnown RBP24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 CHMP3Q9Y3E7 222 aa24.48■■□□□ 1.51
CCHCR1-210ENST00000464012 SAMD7Q7Z3H4 446 aa24.47■■□□□ 1.51
CCHCR1-210ENST00000464012 DPF2Q92785 391 aa24.47■■□□□ 1.51
CCHCR1-210ENST00000464012 MPHOSPH8Q99549 860 aa24.47■■□□□ 1.51
CCHCR1-210ENST00000464012 ZNF646O15015 1829 aaPredicted RBP24.47■■□□□ 1.51
CCHCR1-210ENST00000464012 CSF1RP07333 972 aa24.46■■□□□ 1.51
CCHCR1-210ENST00000464012 RPS12P25398 132 aaKnown RBP24.46■■□□□ 1.51
CCHCR1-210ENST00000464012 CCT4P50991 539 aaKnown RBP24.46■■□□□ 1.51
CCHCR1-210ENST00000464012 TBC1D10BQ4KMP7 808 aaPredicted RBP24.46■■□□□ 1.51
CCHCR1-210ENST00000464012 GLIS2Q9BZE0 524 aaPredicted RBP24.46■■□□□ 1.51
CCHCR1-210ENST00000464012 MED23Q9ULK4 1368 aa24.45■■□□□ 1.5
CCHCR1-210ENST00000464012 ANKRD18BA2A2Z9 1011 aa24.45■■□□□ 1.5
CCHCR1-210ENST00000464012 RBM26Q5T8P6 1007 aaKnown RBP24.45■■□□□ 1.5
CCHCR1-210ENST00000464012 GRM8O00222 908 aa24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 EGFRP00533 1210 aa24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 VIL1P09327 827 aaKnown RBP24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 VEGFBP49765 207 aa24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 FOXO4P98177 505 aa24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 SLFN5Q08AF3 891 aa24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 SRCIN1Q9C0H9 1055 aa24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 C9orf78Q9NZ63 289 aaPredicted RBP24.44■■□□□ 1.5
CCHCR1-210ENST00000464012 CCER2I3L3R5 266 aa24.43■■□□□ 1.5
CCHCR1-210ENST00000464012 DEFB115Q30KQ5 88 aa24.43■■□□□ 1.5
CCHCR1-210ENST00000464012 MRPL50Q8N5N7 158 aaKnown RBP24.43■■□□□ 1.5
CCHCR1-210ENST00000464012 CDCA7LQ96GN5 454 aa24.43■■□□□ 1.5
CCHCR1-210ENST00000464012 IFIT5Q13325 482 aaKnown RBP24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 EPHA10Q5JZY3 1008 aa24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 LMBR1LQ6UX01 489 aa24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 ZC3H15Q8WU90 426 aaKnown RBP24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 FBXW7Q969H0 707 aa24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 ZNF408Q9H9D4 720 aa24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 PGAP2Q9UHJ9 254 aa24.42■■□□□ 1.5
CCHCR1-210ENST00000464012 RASSF10A6NK89 507 aa24.41■■□□□ 1.5
CCHCR1-210ENST00000464012 ALDH1L1O75891 902 aa24.41■■□□□ 1.5
CCHCR1-210ENST00000464012 KIF4BQ2VIQ3 1234 aa24.41■■□□□ 1.5
CCHCR1-210ENST00000464012 CST9Q5W186 159 aa24.41■■□□□ 1.5
CCHCR1-210ENST00000464012 PAXIP1Q6ZW49 1069 aaPredicted RBP24.41■■□□□ 1.5
CCHCR1-210ENST00000464012 ANKRD2Q9GZV1 360 aa24.41■■□□□ 1.5
CCHCR1-210ENST00000464012 ZNF804BA4D1E1 1349 aa24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 CELF2O95319 508 aaKnown RBP24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 KCNJ4P48050 445 aa24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 CHRNDQ07001 517 aa24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 RSBN1LQ6PCB5 846 aaPredicted RBP24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 PODNQ7Z5L7 613 aa24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 LEMD3Q9Y2U8 911 aa24.4■■□□□ 1.5
CCHCR1-210ENST00000464012 USP17L3A6NCW0 530 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 USP17L4A6NCW7 530 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 KLRK1P26718 216 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 GRM1Q13255 1194 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 CDC37L1Q7L3B6 337 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 USP17L1Q7RTZ2 530 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 TXNRD3Q86VQ6 643 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 SSH1Q8WYL5 1049 aa24.39■■□□□ 1.49
CCHCR1-210ENST00000464012 TAF7LQ5H9L4 462 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms