RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 DZIP1LQ8IYY4 767 aaKnown RBP12.53□□□□□ -0.4
VPS45-204ENST00000460366 C9orf78Q9NZ63 289 aaPredicted RBP12.53□□□□□ -0.4
VPS45-204ENST00000460366 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
VPS45-204ENST00000460366 HDAC5Q9UQL6 1122 aa12.53□□□□□ -0.4
VPS45-204ENST00000460366 UBE3BQ7Z3V4 1068 aa12.52□□□□□ -0.41
VPS45-204ENST00000460366 CNKSR1Q969H4 720 aa12.52□□□□□ -0.41
VPS45-204ENST00000460366 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
VPS45-204ENST00000460366 USP44Q9H0E7 712 aa12.52□□□□□ -0.41
VPS45-204ENST00000460366 CHRNA5P30532 468 aa12.51□□□□□ -0.41
VPS45-204ENST00000460366 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
VPS45-204ENST00000460366 PDE3AQ14432 1141 aa12.51□□□□□ -0.41
VPS45-204ENST00000460366 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
VPS45-204ENST00000460366 FTSJ3Q8IY81 847 aaKnown RBP12.51□□□□□ -0.41
VPS45-204ENST00000460366 TTLL6Q8N841 843 aa12.51□□□□□ -0.41
VPS45-204ENST00000460366 RBM17Q96I25 401 aaKnown RBP12.51□□□□□ -0.41
VPS45-204ENST00000460366 CTSWP56202 376 aa12.5□□□□□ -0.41
VPS45-204ENST00000460366 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
VPS45-204ENST00000460366 JARID2Q92833 1246 aaPredicted RBP12.5□□□□□ -0.41
VPS45-204ENST00000460366 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
VPS45-204ENST00000460366 ZNF622Q969S3 477 aaKnown RBP eCLIP12.5□□□□□ -0.419e-8■■■■■ 29.7
VPS45-204ENST00000460366 CLUAP1Q96AJ1 413 aa12.5□□□□□ -0.41
VPS45-204ENST00000460366 ANKRD31Q8N7Z5 1873 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 PPP1R37O75864 691 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 CSF1RP07333 972 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 GNAI3P08754 354 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 NBPF7P0C2Y1 421 aaPredicted RBP12.49□□□□□ -0.41
VPS45-204ENST00000460366 CCDC152Q4G0S7 254 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 TMEM57Q8N5G2 664 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 TTLL11Q8NHH1 800 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 TNNQ9UQP3 1299 aa12.49□□□□□ -0.41
VPS45-204ENST00000460366 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
VPS45-204ENST00000460366 BBOX1O75936 387 aa12.48□□□□□ -0.41
VPS45-204ENST00000460366 RLBP1P12271 317 aa12.48□□□□□ -0.41
VPS45-204ENST00000460366 FOXO4P98177 505 aa12.48□□□□□ -0.41
VPS45-204ENST00000460366 DDX46Q7L014 1031 aaKnown RBP12.48□□□□□ -0.41
VPS45-204ENST00000460366 KIAA1551Q9HCM1 1747 aa12.48□□□□□ -0.41
VPS45-204ENST00000460366 SNPHO15079 494 aa12.47□□□□□ -0.41
VPS45-204ENST00000460366 PLIN1O60240 522 aa12.47□□□□□ -0.41
VPS45-204ENST00000460366 GRIN3BO60391 1043 aa12.47□□□□□ -0.41
VPS45-204ENST00000460366 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
VPS45-204ENST00000460366 TMC4Q7Z404 712 aa12.47□□□□□ -0.41
VPS45-204ENST00000460366 SUCLG2Q96I99 432 aa12.47□□□□□ -0.41
VPS45-204ENST00000460366 CHMP4BQ9H444 224 aaKnown RBP12.47□□□□□ -0.41
VPS45-204ENST00000460366 ZBTB7BO15156 539 aaPredicted RBP12.46□□□□□ -0.41
VPS45-204ENST00000460366 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
VPS45-204ENST00000460366 GRAPQ13588 217 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 RABL6Q3YEC7 729 aaPredicted RBP12.46□□□□□ -0.41
VPS45-204ENST00000460366 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 SOGA3Q5TF21 947 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
VPS45-204ENST00000460366 ITPRIPQ8IWB1 547 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 GRAPLQ8TC17 118 aaPredicted RBP12.46□□□□□ -0.41
VPS45-204ENST00000460366 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 C7orf43Q8WVR3 580 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 MEIS3Q99687 375 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 BCS1LQ9Y276 419 aa12.46□□□□□ -0.41
VPS45-204ENST00000460366 RPS8P62241 208 aaKnown RBP12.45□□□□□ -0.42
VPS45-204ENST00000460366 MVPQ14764 893 aaKnown RBP12.45□□□□□ -0.42
VPS45-204ENST00000460366 GPR162Q16538 588 aa12.45□□□□□ -0.42
VPS45-204ENST00000460366 EPHA10Q5JZY3 1008 aa12.45□□□□□ -0.42
VPS45-204ENST00000460366 LMBR1LQ6UX01 489 aa12.45□□□□□ -0.42
VPS45-204ENST00000460366 CDC5LQ99459 802 aaKnown RBP12.45□□□□□ -0.42
VPS45-204ENST00000460366 DDX19BQ9UMR2 479 aa12.45□□□□□ -0.42
VPS45-204ENST00000460366 N4BP2Q86UW6 1770 aaPredicted RBP12.45□□□□□ -0.42
VPS45-204ENST00000460366 DDX60Q8IY21 1712 aaKnown RBP12.45□□□□□ -0.42
VPS45-204ENST00000460366 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
VPS45-204ENST00000460366 LAMB2P55268 1798 aa12.44□□□□□ -0.42
VPS45-204ENST00000460366 DLEC1Q9Y238 1755 aa12.44□□□□□ -0.42
VPS45-204ENST00000460366 GNAI2P04899 355 aa12.44□□□□□ -0.42
VPS45-204ENST00000460366 YBX3P16989 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
VPS45-204ENST00000460366 IFIT5Q13325 482 aaKnown RBP12.44□□□□□ -0.42
VPS45-204ENST00000460366 SP8Q8IXZ3 490 aa12.44□□□□□ -0.42
VPS45-204ENST00000460366 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
VPS45-204ENST00000460366 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
VPS45-204ENST00000460366 GREM2Q9H772 168 aa12.44□□□□□ -0.42
VPS45-204ENST00000460366 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
VPS45-204ENST00000460366 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
VPS45-204ENST00000460366 ITGA6P23229 1130 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 ANKRD18AQ8IVF6 992 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 TMX4Q9H1E5 349 aaPredicted RBP12.43□□□□□ -0.42
VPS45-204ENST00000460366 SEC31BQ9NQW1 1179 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 ATP6V0A2Q9Y487 856 aa12.43□□□□□ -0.42
VPS45-204ENST00000460366 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
VPS45-204ENST00000460366 BRCA1P38398 1863 aaKnown RBP12.42□□□□□ -0.42
VPS45-204ENST00000460366 C21orf2O43822 256 aa12.42□□□□□ -0.42
VPS45-204ENST00000460366 MTX1Q13505 466 aa12.42□□□□□ -0.42
VPS45-204ENST00000460366 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
VPS45-204ENST00000460366 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
VPS45-204ENST00000460366 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
VPS45-204ENST00000460366 RTKN2Q8IZC4 609 aa12.42□□□□□ -0.42
VPS45-204ENST00000460366 CELF1Q92879 486 aaKnown RBP12.42□□□□□ -0.42
VPS45-204ENST00000460366 CCDC85AQ96PX6 553 aaPredicted RBP12.42□□□□□ -0.42
VPS45-204ENST00000460366 BSDC1Q9NW68 430 aaPredicted RBP12.42□□□□□ -0.42
VPS45-204ENST00000460366 LRRFIP2Q9Y608 721 aaKnown RBP12.42□□□□□ -0.42
VPS45-204ENST00000460366 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms