RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 UFL1O94874 794 aa24.1■■□□□ 1.45
COL5A1-203ENST00000460264 GMPSP49915 693 aaPredicted RBP24.1■■□□□ 1.45
COL5A1-203ENST00000460264 MAP1SQ66K74 1059 aaPredicted RBP24.1■■□□□ 1.45
COL5A1-203ENST00000460264 DBNDD1Q9H9R9 158 aa24.1■■□□□ 1.45
COL5A1-203ENST00000460264 PSME4Q14997 1843 aa24.1■■□□□ 1.45
COL5A1-203ENST00000460264 BEND3Q5T5X7 828 aa24.09■■□□□ 1.45
COL5A1-203ENST00000460264 CREBZFQ9NS37 354 aa24.09■■□□□ 1.45
COL5A1-203ENST00000460264 GGA1Q9UJY5 639 aa24.09■■□□□ 1.45
COL5A1-203ENST00000460264 XDHP47989 1333 aa24.09■■□□□ 1.45
COL5A1-203ENST00000460264 USP50Q70EL3 339 aaPredicted RBP24.08■■□□□ 1.45
COL5A1-203ENST00000460264 JMYQ8N9B5 988 aa24.08■■□□□ 1.45
COL5A1-203ENST00000460264 ADARB2Q9NS39 739 aaKnown RBP24.08■■□□□ 1.45
COL5A1-203ENST00000460264 ECE2O60344 883 aa24.07■■□□□ 1.44
COL5A1-203ENST00000460264 CNTROBQ8N137 903 aa24.07■■□□□ 1.44
COL5A1-203ENST00000460264 BCL2L13Q9BXK5 485 aa24.07■■□□□ 1.44
COL5A1-203ENST00000460264 SLFN5Q08AF3 891 aa24.06■■□□□ 1.44
COL5A1-203ENST00000460264 DOK7Q18PE1 504 aa24.06■■□□□ 1.44
COL5A1-203ENST00000460264 FAM161AQ3B820 660 aa24.06■■□□□ 1.44
COL5A1-203ENST00000460264 ZC3H12CQ9C0D7 883 aaKnown RBP24.06■■□□□ 1.44
COL5A1-203ENST00000460264 BSDC1Q9NW68 430 aaPredicted RBP24.06■■□□□ 1.44
COL5A1-203ENST00000460264 PSMD14O00487 310 aa24.05■■□□□ 1.44
COL5A1-203ENST00000460264 CSF1RP07333 972 aa24.05■■□□□ 1.44
COL5A1-203ENST00000460264 A0A1B0GUL6 1792 aa24.05■■□□□ 1.44
COL5A1-203ENST00000460264 TRPM7Q96QT4 1865 aa24.04■■□□□ 1.44
COL5A1-203ENST00000460264 ITGA6P23229 1130 aa24.04■■□□□ 1.44
COL5A1-203ENST00000460264 MINPP1Q9UNW1 487 aa24.04■■□□□ 1.44
COL5A1-203ENST00000460264 KCNQ5Q9NR82 932 aa24.03■■□□□ 1.44
COL5A1-203ENST00000460264 ZBTB12Q9Y330 459 aaPredicted RBP24.03■■□□□ 1.44
COL5A1-203ENST00000460264 SHTN1A0MZ66 631 aa24.02■■□□□ 1.44
COL5A1-203ENST00000460264 TMEM88BA6NKF7 163 aa24.02■■□□□ 1.44
COL5A1-203ENST00000460264 ATP2B4P23634 1241 aa24.02■■□□□ 1.44
COL5A1-203ENST00000460264 IGHMBP2P38935 993 aaKnown RBP24.02■■□□□ 1.44
COL5A1-203ENST00000460264 CDCA7LQ96GN5 454 aa24.02■■□□□ 1.44
COL5A1-203ENST00000460264 CNOT7Q9UIV1 285 aaKnown RBP24.02■■□□□ 1.44
COL5A1-203ENST00000460264 GRM8O00222 908 aa24.01■■□□□ 1.43
COL5A1-203ENST00000460264 ALDH1L1O75891 902 aa24.01■■□□□ 1.43
COL5A1-203ENST00000460264 FOXO4P98177 505 aa24.01■■□□□ 1.43
COL5A1-203ENST00000460264 SLC4A10Q6U841 1118 aa24.01■■□□□ 1.43
COL5A1-203ENST00000460264 MICALL2Q8IY33 904 aa24.01■■□□□ 1.43
COL5A1-203ENST00000460264 MRPL50Q8N5N7 158 aaKnown RBP24.01■■□□□ 1.43
COL5A1-203ENST00000460264 DPF2Q92785 391 aa24.01■■□□□ 1.43
COL5A1-203ENST00000460264 ZNF646O15015 1829 aaPredicted RBP24■■□□□ 1.43
COL5A1-203ENST00000460264 WTIPA6NIX2 430 aaPredicted RBP24■■□□□ 1.43
COL5A1-203ENST00000460264 G3V3G9 751 aa24■■□□□ 1.43
COL5A1-203ENST00000460264 DCAF8Q5TAQ9 597 aa24■■□□□ 1.43
COL5A1-203ENST00000460264 TRPM4Q8TD43 1214 aa24■■□□□ 1.43
COL5A1-203ENST00000460264 SRCIN1Q9C0H9 1055 aa24■■□□□ 1.43
COL5A1-203ENST00000460264 MED23Q9ULK4 1368 aa24■■□□□ 1.43
COL5A1-203ENST00000460264 PCNTO95613 3336 aa23.99■■□□□ 1.43
COL5A1-203ENST00000460264 RPS12P25398 132 aaKnown RBP23.99■■□□□ 1.43
COL5A1-203ENST00000460264 HIRAP54198 1017 aaPredicted RBP23.99■■□□□ 1.43
COL5A1-203ENST00000460264 SSH1Q8WYL5 1049 aa23.99■■□□□ 1.43
COL5A1-203ENST00000460264 MKRN1Q9UHC7 482 aaKnown RBP23.99■■□□□ 1.43
COL5A1-203ENST00000460264 CNTNAP1P78357 1384 aa23.99■■□□□ 1.43
COL5A1-203ENST00000460264 ZNF609O15014 1411 aa23.99■■□□□ 1.43
COL5A1-203ENST00000460264 CCT4P50991 539 aaKnown RBP23.98■■□□□ 1.43
COL5A1-203ENST00000460264 TRMT2AQ8IZ69 625 aaKnown RBP23.98■■□□□ 1.43
COL5A1-203ENST00000460264 MPHOSPH8Q99549 860 aa23.98■■□□□ 1.43
COL5A1-203ENST00000460264 C9orf78Q9NZ63 289 aaPredicted RBP23.98■■□□□ 1.43
COL5A1-203ENST00000460264 ANKRD18BA2A2Z9 1011 aa23.97■■□□□ 1.43
COL5A1-203ENST00000460264 H7C1D1 291 aa23.97■■□□□ 1.43
COL5A1-203ENST00000460264 PTPRCP08575 1304 aa23.97■■□□□ 1.43
COL5A1-203ENST00000460264 VIL1P09327 827 aaKnown RBP23.97■■□□□ 1.43
COL5A1-203ENST00000460264 EPHA10Q5JZY3 1008 aa23.97■■□□□ 1.43
COL5A1-203ENST00000460264 PGAP2Q9UHJ9 254 aa23.97■■□□□ 1.43
COL5A1-203ENST00000460264 TRAF5O00463 557 aa23.96■■□□□ 1.43
COL5A1-203ENST00000460264 FMR1Q06787 632 aaKnown RBP eCLIP23.96■■□□□ 1.43
COL5A1-203ENST00000460264 IFIT5Q13325 482 aaKnown RBP23.96■■□□□ 1.43
COL5A1-203ENST00000460264 ZC3H15Q8WU90 426 aaKnown RBP23.96■■□□□ 1.43
COL5A1-203ENST00000460264 CHMP3Q9Y3E7 222 aa23.96■■□□□ 1.43
COL5A1-203ENST00000460264 LMBR1LQ6UX01 489 aa23.95■■□□□ 1.42
COL5A1-203ENST00000460264 ANKRD2Q9GZV1 360 aa23.95■■□□□ 1.42
COL5A1-203ENST00000460264 LEMD3Q9Y2U8 911 aa23.95■■□□□ 1.42
COL5A1-203ENST00000460264 SAMD7Q7Z3H4 446 aa23.94■■□□□ 1.42
COL5A1-203ENST00000460264 PODNQ7Z5L7 613 aa23.94■■□□□ 1.42
COL5A1-203ENST00000460264 ZNF804BA4D1E1 1349 aa23.93■■□□□ 1.42
COL5A1-203ENST00000460264 UTYO14607 1347 aa23.93■■□□□ 1.42
COL5A1-203ENST00000460264 POLR2AP24928 1970 aaKnown RBP23.93■■□□□ 1.42
COL5A1-203ENST00000460264 EGFRP00533 1210 aa23.93■■□□□ 1.42
COL5A1-203ENST00000460264 CHRNDQ07001 517 aa23.93■■□□□ 1.42
COL5A1-203ENST00000460264 ALDH1L2Q3SY69 923 aa23.93■■□□□ 1.42
COL5A1-203ENST00000460264 TBC1D10BQ4KMP7 808 aaPredicted RBP23.92■■□□□ 1.42
COL5A1-203ENST00000460264 RSBN1LQ6PCB5 846 aaPredicted RBP23.92■■□□□ 1.42
COL5A1-203ENST00000460264 TXNRD3Q86VQ6 643 aa23.92■■□□□ 1.42
COL5A1-203ENST00000460264 GLIS2Q9BZE0 524 aaPredicted RBP23.92■■□□□ 1.42
COL5A1-203ENST00000460264 USP17L3A6NCW0 530 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 USP17L4A6NCW7 530 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 RASSF10A6NK89 507 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 NBPF7P0C2Y1 421 aaPredicted RBP23.91■■□□□ 1.42
COL5A1-203ENST00000460264 KLRK1P26718 216 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 CCDC57Q2TAC2 916 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 USP17L1Q7RTZ2 530 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 AGBL3Q8NEM8 1001 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 KAZALD1Q96I82 304 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 SUCLG2Q96I99 432 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 SMC4Q9NTJ3 1288 aa23.91■■□□□ 1.42
COL5A1-203ENST00000460264 ABT1Q9ULW3 272 aaKnown RBP23.91■■□□□ 1.42
COL5A1-203ENST00000460264 CT47B1P0C2W7 299 aaPredicted RBP23.9■■□□□ 1.42
COL5A1-203ENST00000460264 CST9Q5W186 159 aa23.9■■□□□ 1.42
COL5A1-203ENST00000460264 GMLQ99445 158 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms