RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 USP17L13C9JLJ4 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L12C9JPN9 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L11C9JVI0 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L21D6R901 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L18D6R9N7 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L22D6RA61 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L17D6RBQ6 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L19D6RCP7 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L20D6RJB6 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ATP5J2-PTCD1G3V325 749 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 PTCD1O75127 700 aaKnown RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 RPS6KA4O75676 772 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TMPOP42166 694 aaKnown RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L24Q0WX57 530 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 SLC39A6Q13433 755 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 NR6A1Q15406 480 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TAF7Q15545 349 aaPredicted RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 NAALADL2Q58DX5 795 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 DESI1Q6ICB0 168 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 COL23A1Q86Y22 540 aaPredicted RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TTC5Q8N0Z6 440 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 PNISRQ8TF01 805 aaKnown RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TATDN2Q93075 761 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 FMNL2Q96PY5 1086 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TEX13AQ9BXU3 409 aaPredicted RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 BABAM1Q9NWV8 329 aa6.06□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 DLG5Q8TDM6 1919 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 BTBD11A6QL63 1104 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 USP17L5A8MUK1 530 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 STARD3NLO95772 234 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CYP19A1P11511 503 aaPredicted RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ATP2B4P23634 1241 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CRKLP46109 303 aaKnown RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 SERPINB4P48594 390 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 RIPK4P57078 832 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 MCCD1P59942 119 aaPredicted RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 MCM10Q7L590 875 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 PACS2Q86VP3 889 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 DNAJC10Q8IXB1 793 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ANKRD13AQ8IZ07 590 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ZNF592Q92610 1267 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ZNF496Q96IT1 587 aaPredicted RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 BIN2Q9UBW5 565 aaPredicted RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 MKRN1Q9UHC7 482 aaKnown RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TSKSQ9UJT2 592 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 RTCBQ9Y3I0 505 aaKnown RBP6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 KDM3BQ7LBC6 1761 aa6.05□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 SOS1Q07889 1333 aaPredicted RBP6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 MYH14Q7Z406 1995 aaKnown RBP6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ZBBXA8MT70 800 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ZBTB7AO95365 584 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 RECKO95980 971 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 SKIP12755 728 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 DCTN1Q14203 1278 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 GRIPAP1Q4V328 841 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CCDC184Q52MB2 194 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CRTC2Q53ET0 693 aaPredicted RBP6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 INTS5Q6P9B9 1019 aaKnown RBP6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TAS1R3Q7RTX0 852 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 AMIGO3Q86WK7 504 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ANKMY2Q8IV38 441 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 MRS2Q9HD23 443 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CCDC87Q9NVE4 849 aa6.04□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 PIK3CDO00329 1044 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 KCNQ3O43525 872 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 SNRPA1P09661 255 aaKnown RBP6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 RASA1P20936 1047 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 POLD1P28340 1107 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 EIF4A1P60842 406 aaKnown RBP6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CALD1Q05682 793 aaKnown RBP6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 TRAPPC3LQ5T215 181 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 CCDC146Q8IYE0 955 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 NGEFQ8N5V2 710 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 ASB16Q96NS5 453 aa6.03□□□□□ -1.44
RNU6ATAC28P-201ENST00000459249 C4AP0C0L4 1744 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 ERBB4Q15303 1308 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 USP42Q9H9J4 1324 aaKnown RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 ZC3H4Q9UPT8 1303 aaKnown RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 C3orf80F5H4A9 247 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 C6orf229H3BNL8 230 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 CCER2I3L3R5 266 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 CHL1O00533 1208 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 APAF1O14727 1248 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 GIGYF1O75420 1035 aaPredicted RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 FBXO45P0C2W1 286 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 IL6STP40189 918 aaPredicted RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 EIF5P55010 431 aaKnown RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 NLGN1Q8N2Q7 840 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 TSC1Q92574 1164 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 THUMPD2Q9BTF0 503 aaKnown RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 PPP1R1BQ9UD71 204 aaPredicted RBP6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 PNMA3Q9UL41 463 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 ZBTB1Q9Y2K1 713 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 LAMB4A4D0S4 1761 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 COL15A1P39059 1388 aa6.02□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 A0A087WZG4 1122 aa6.01□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 TRIM6-TRIM34B2RNG4 842 aa6.01□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 PPP1R3GB7ZBB8 358 aa6.01□□□□□ -1.45
RNU6ATAC28P-201ENST00000459249 ICMTO60725 284 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms