RNA–Protein interactions for RNA: ENST00000458126.6

CDKN3-205, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-205ENST00000458126 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
CDKN3-205ENST00000458126 ZFHX4Q86UP3 3567 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 ROBO2Q9HCK4 1378 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 DDB1Q16531 1140 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 COL23A1Q86Y22 540 aaPredicted RBP8.11□□□□□ -1.11
CDKN3-205ENST00000458126 LINC00528Q8N1L1 170 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
CDKN3-205ENST00000458126 SLC10A4Q96EP9 437 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 PCMTD1Q96MG8 357 aaPredicted RBP8.11□□□□□ -1.11
CDKN3-205ENST00000458126 TSEN34Q9BSV6 310 aaKnown RBP8.11□□□□□ -1.11
CDKN3-205ENST00000458126 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 STK17AQ9UEE5 414 aa8.11□□□□□ -1.11
CDKN3-205ENST00000458126 BMP2P12643 396 aa8.1□□□□□ -1.11
CDKN3-205ENST00000458126 RFC5P40937 340 aa8.1□□□□□ -1.11
CDKN3-205ENST00000458126 DHX9Q08211 1270 aaKnown RBP8.1□□□□□ -1.11
CDKN3-205ENST00000458126 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
CDKN3-205ENST00000458126 LARP1Q6PKG0 1096 aaKnown RBP8.1□□□□□ -1.11
CDKN3-205ENST00000458126 KCTD15Q96SI1 283 aaPredicted RBP8.1□□□□□ -1.11
CDKN3-205ENST00000458126 MUC6Q6W4X9 2439 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 CCDC18Q5T9S5 1454 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 USP17L8P0C7I0 530 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 C6orf118Q5T5N4 469 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 PPP1R26Q5T8A7 1209 aaPredicted RBP8.09□□□□□ -1.11
CDKN3-205ENST00000458126 IL27Q8NEV9 243 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 OCSTAMPQ9BR26 566 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 TRPM1Q7Z4N2 1603 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 EYSQ5T1H1 3165 aa8.09□□□□□ -1.11
CDKN3-205ENST00000458126 QRICH2Q9H0J4 1663 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 COL18A1P39060 1754 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 MAN1A2O60476 641 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 SLC27A3Q5K4L6 730 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 Q6ZVU0 165 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 CTU1Q7Z7A3 348 aaKnown RBP8.08□□□□□ -1.12
CDKN3-205ENST00000458126 HIRIP3Q9BW71 556 aaPredicted RBP8.08□□□□□ -1.12
CDKN3-205ENST00000458126 ABT1Q9ULW3 272 aaKnown RBP8.08□□□□□ -1.12
CDKN3-205ENST00000458126 EEA1Q15075 1411 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 ERBINQ96RT1 1412 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 KIAA1551Q9HCM1 1747 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 SBF1O95248 1867 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 PIK3C2AO00443 1686 aa8.08□□□□□ -1.12
CDKN3-205ENST00000458126 KDM6AO15550 1401 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-205ENST00000458126 H0YGN5 161 aa8.07□□□□□ -1.12
CDKN3-205ENST00000458126 SOX1O00570 391 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-205ENST00000458126 EVA1CP58658 441 aa8.07□□□□□ -1.12
CDKN3-205ENST00000458126 CYP4F22Q6NT55 531 aa8.07□□□□□ -1.12
CDKN3-205ENST00000458126 ADAM32Q8TC27 787 aa8.07□□□□□ -1.12
CDKN3-205ENST00000458126 EPS8L1Q8TE68 723 aa8.07□□□□□ -1.12
CDKN3-205ENST00000458126 HMX1Q9NP08 348 aaPredicted RBP8.07□□□□□ -1.12
CDKN3-205ENST00000458126 NHSQ6T4R5 1651 aa8.07□□□□□ -1.12
CDKN3-205ENST00000458126 TRANK1O15050 2925 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 CRYBG1Q9Y4K1 1723 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 BDP1A6H8Y1 2624 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 GMPRP36959 345 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 CHRNA2Q15822 529 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 PRO3102Q9H379 93 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 CCNB3Q8WWL7 1395 aa8.06□□□□□ -1.12
CDKN3-205ENST00000458126 SOBPA7XYQ1 873 aa8.05□□□□□ -1.12
CDKN3-205ENST00000458126 VSIG8P0DPA2 414 aa8.05□□□□□ -1.12
CDKN3-205ENST00000458126 INTS6LQ5JSJ4 861 aaKnown RBP8.05□□□□□ -1.12
CDKN3-205ENST00000458126 LDHDQ86WU2 507 aa8.05□□□□□ -1.12
CDKN3-205ENST00000458126 ARFGEF1Q9Y6D6 1849 aa8.05□□□□□ -1.12
CDKN3-205ENST00000458126 AKAP12Q02952 1782 aa8.05□□□□□ -1.12
CDKN3-205ENST00000458126 CASKIN1Q8WXD9 1431 aa8.04□□□□□ -1.12
CDKN3-205ENST00000458126 AOC2O75106 756 aa8.04□□□□□ -1.12
CDKN3-205ENST00000458126 TGFB2P61812 414 aa8.04□□□□□ -1.12
CDKN3-205ENST00000458126 MAP3K11Q16584 847 aa8.04□□□□□ -1.12
CDKN3-205ENST00000458126 DEFB123Q8N688 67 aa8.04□□□□□ -1.12
CDKN3-205ENST00000458126 HCN4Q9Y3Q4 1203 aa8.04□□□□□ -1.12
CDKN3-205ENST00000458126 TTLL8A6PVC2 850 aa8.03□□□□□ -1.12
CDKN3-205ENST00000458126 SPINT1O43278 529 aa8.03□□□□□ -1.12
CDKN3-205ENST00000458126 GRM1Q13255 1194 aa8.03□□□□□ -1.12
CDKN3-205ENST00000458126 PKN2Q16513 984 aaKnown RBP8.03□□□□□ -1.12
CDKN3-205ENST00000458126 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.03□□□□□ -1.12
CDKN3-205ENST00000458126 TRIM34Q9BYJ4 488 aa8.03□□□□□ -1.12
CDKN3-205ENST00000458126 DNMT3LQ9UJW3 386 aa8.03□□□□□ -1.12
CDKN3-205ENST00000458126 BRCA1P38398 1863 aaKnown RBP8.02□□□□□ -1.12
CDKN3-205ENST00000458126 KIF13BQ9NQT8 1826 aa8.02□□□□□ -1.13
CDKN3-205ENST00000458126 KRT37O76014 449 aa8.02□□□□□ -1.13
CDKN3-205ENST00000458126 CBLBQ13191 982 aa8.02□□□□□ -1.13
CDKN3-205ENST00000458126 DZIP3Q86Y13 1208 aaKnown RBP8.02□□□□□ -1.13
CDKN3-205ENST00000458126 DCAF5Q96JK2 942 aa8.02□□□□□ -1.13
CDKN3-205ENST00000458126 CDCA7Q9BWT1 371 aaPredicted RBP8.02□□□□□ -1.13
CDKN3-205ENST00000458126 MTMR10Q9NXD2 777 aa8.02□□□□□ -1.13
CDKN3-205ENST00000458126 SETXQ7Z333 2677 aaKnown RBP8.02□□□□□ -1.13
CDKN3-205ENST00000458126 N4BP2Q86UW6 1770 aaPredicted RBP8.02□□□□□ -1.13
CDKN3-205ENST00000458126 A0A0G2JLW4 131 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 A0A1W2PPC1 479 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 FAM181BA6NEQ2 426 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 ESPNB1AK53 854 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 PPFIA3O75145 1194 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 MRE11P49959 708 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 ALS2Q96Q42 1657 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 PRUNE2Q8WUY3 3088 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 BTAF1O14981 1849 aa8.01□□□□□ -1.13
CDKN3-205ENST00000458126 ANKRD30BQ9BXX2 1392 aa8□□□□□ -1.13
CDKN3-205ENST00000458126 EPG5Q9HCE0 2579 aa8□□□□□ -1.13
CDKN3-205ENST00000458126 ZSCAN1Q8NBB4 408 aa8□□□□□ -1.13
CDKN3-205ENST00000458126 BANK1Q8NDB2 785 aa8□□□□□ -1.13
CDKN3-205ENST00000458126 NAIPQ13075 1403 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms