RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CLIP2Q9UDT6 1046 aa23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 CHRNA2Q15822 529 aa23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 LMBR1LQ6UX01 489 aa23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 CCDC85AQ96PX6 553 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
CNEP1R1-203ENST00000458059 CRYBG1Q9Y4K1 1723 aa23.08■■□□□ 1.28
CNEP1R1-203ENST00000458059 ZNF75DP51815 510 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 RESTQ13127 1097 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 OTUD7BQ6GQQ9 843 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 DDX19AQ9NUU7 478 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 ELP1O95163 1332 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 U2AF2P26368 475 aaKnown RBP eCLIP23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 HSP90AB3PQ58FF7 597 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 MTERF4Q7Z6M4 381 aaKnown RBP23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 FILIP1Q7Z7B0 1213 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 TTC5Q8N0Z6 440 aa23.07■■□□□ 1.28
CNEP1R1-203ENST00000458059 CACTINQ8WUQ7 758 aaKnown RBP23.06■■□□□ 1.28
CNEP1R1-203ENST00000458059 ZNF594Q96JF6 807 aaPredicted RBP23.06■■□□□ 1.28
CNEP1R1-203ENST00000458059 GPHNQ9NQX3 736 aaPredicted RBP23.06■■□□□ 1.28
CNEP1R1-203ENST00000458059 ZNF330Q9Y3S2 320 aaPredicted RBP23.06■■□□□ 1.28
CNEP1R1-203ENST00000458059 HMG20BQ9P0W2 317 aa23.06■■□□□ 1.28
CNEP1R1-203ENST00000458059 ZSCAN25Q6NSZ9 544 aa23.05■■□□□ 1.28
CNEP1R1-203ENST00000458059 ANKLE2Q86XL3 938 aa23.05■■□□□ 1.28
CNEP1R1-203ENST00000458059 CCAR1Q8IX12 1150 aaKnown RBP23.05■■□□□ 1.28
CNEP1R1-203ENST00000458059 SLC52A2Q9HAB3 445 aa23.05■■□□□ 1.28
CNEP1R1-203ENST00000458059 TTLL5Q6EMB2 1281 aa23.05■■□□□ 1.28
CNEP1R1-203ENST00000458059 PDCL2Q8N4E4 241 aa23.05■■□□□ 1.28
CNEP1R1-203ENST00000458059 UTYO14607 1347 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 GOLGA6L19H0YKK7 550 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 ATP5JP18859 108 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 HAND2P61296 217 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 MCMDC2Q4G0Z9 681 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 SNRKQ9NRH2 765 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 KRT28Q7Z3Y7 464 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 GOLPH3LQ9H4A5 285 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 PTPDC1A2A3K4 754 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 TPD52L1Q16890 204 aaPredicted RBP23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 USP28Q96RU2 1077 aa23.04■■□□□ 1.28
CNEP1R1-203ENST00000458059 HEG1Q9ULI3 1381 aa23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 TNNT1P13805 278 aa23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 ME1P48163 572 aa23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 RFX5P48382 616 aaPredicted RBP23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 TRMT1Q9NXH9 659 aaKnown RBP23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 V9GYY5 206 aaPredicted RBP23.03■■□□□ 1.28
CNEP1R1-203ENST00000458059 KRT32Q14532 448 aa23.02■■□□□ 1.28
CNEP1R1-203ENST00000458059 GJB4Q9NTQ9 266 aa23.02■■□□□ 1.28
CNEP1R1-203ENST00000458059 COPRSQ9NQ92 184 aa23.02■■□□□ 1.28
CNEP1R1-203ENST00000458059 USP27XA6NNY8 438 aa23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 SYTL4Q96C24 671 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 BECN2A8MW95 431 aa23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 CTDNEP1O95476 244 aa23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 TRHP20396 242 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 U3KPZ7 1027 aaPredicted RBP23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 GTF2F1P35269 517 aaKnown RBP eCLIP23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 NSUN7Q8NE18 718 aaKnown RBP23.01■■□□□ 1.27
CNEP1R1-203ENST00000458059 ERBB3P21860 1342 aa23■■□□□ 1.27
CNEP1R1-203ENST00000458059 TPM3P06753 285 aa23■■□□□ 1.27
CNEP1R1-203ENST00000458059 FMNL2Q96PY5 1086 aa23■■□□□ 1.27
CNEP1R1-203ENST00000458059 USPL1Q5W0Q7 1092 aa23■■□□□ 1.27
CNEP1R1-203ENST00000458059 PLA2G4DQ86XP0 818 aa23■■□□□ 1.27
CNEP1R1-203ENST00000458059 PHKG2P15735 406 aa22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 FKBP4Q02790 459 aaKnown RBP eCLIP22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 LRRC24Q50LG9 513 aa22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 ZBTB3Q9H5J0 574 aa22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 POLR3DP05423 398 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 TATP17735 454 aaPredicted RBP22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 TDRD7Q8NHU6 1098 aaKnown RBP22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 CFAP45Q9UL16 551 aa22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 LMO7Q8WWI1 1683 aa22.99■■□□□ 1.27
CNEP1R1-203ENST00000458059 FSIP1Q8NA03 581 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 PRDM4Q9UKN5 801 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 BIN1O00499 593 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 ISM2Q6H9L7 571 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 CCDC73Q6ZRK6 1079 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 HAUS7Q99871 368 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 PAG1Q9NWQ8 432 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 A0A1B0GVL5 298 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 NPHP1O15259 732 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 TTLL7Q6ZT98 887 aa22.98■■□□□ 1.27
CNEP1R1-203ENST00000458059 KDM6AO15550 1401 aaPredicted RBP22.97■■□□□ 1.27
CNEP1R1-203ENST00000458059 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-203ENST00000458059 KBTBD3Q8NAB2 608 aa22.97■■□□□ 1.27
CNEP1R1-203ENST00000458059 KINO60870 393 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-203ENST00000458059 TSGA10IPQ3SY00 556 aa22.97■■□□□ 1.27
CNEP1R1-203ENST00000458059 DHX32Q7L7V1 743 aaKnown RBP22.97■■□□□ 1.27
CNEP1R1-203ENST00000458059 ADD1P35611 737 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-203ENST00000458059 PUS3Q9BZE2 481 aaKnown RBP22.96■■□□□ 1.27
CNEP1R1-203ENST00000458059 AOPEPQ8N6M6 819 aa22.96■■□□□ 1.27
CNEP1R1-203ENST00000458059 CYP27B1O15528 508 aa22.95■■□□□ 1.27
CNEP1R1-203ENST00000458059 E7EWF7 191 aa22.95■■□□□ 1.26
CNEP1R1-203ENST00000458059 SDF4Q9BRK5 362 aa22.95■■□□□ 1.26
CNEP1R1-203ENST00000458059 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
CNEP1R1-203ENST00000458059 CABP4P57796 275 aa22.95■■□□□ 1.26
CNEP1R1-203ENST00000458059 IQCB1Q15051 598 aa22.95■■□□□ 1.26
CNEP1R1-203ENST00000458059 RBM43Q6ZSC3 357 aaKnown RBP22.95■■□□□ 1.26
CNEP1R1-203ENST00000458059 HSPD1P10809 573 aaKnown RBP22.94■■□□□ 1.26
CNEP1R1-203ENST00000458059 NCBP1Q09161 790 aaKnown RBP22.94■■□□□ 1.26
CNEP1R1-203ENST00000458059 WASHC4Q2M389 1173 aa22.94■■□□□ 1.26
CNEP1R1-203ENST00000458059 ZSCAN16Q9H4T2 348 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms