RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 TJP1Q07157 1748 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 ARFGEF2Q9Y6D5 1785 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 A0A1B0GUL7 405 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 PRAMEF22A3QJZ6 481 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 RGL2O15211 777 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 SETSIPP0DME0 302 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 SLC4A3P48751 1232 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 PDIA6Q15084 440 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 LRP10Q7Z4F1 713 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 KRT222Q8N1A0 295 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 MPNDQ8N594 471 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 DDX54Q8TDD1 881 aaKnown RBP8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 SLKQ9H2G2 1235 aaPredicted RBP8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 DDX21Q9NR30 783 aaKnown RBP eCLIP8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 CHPF2Q9P2E5 772 aa8.09□□□□□ -1.11
CUBNP3-201ENST00000457461 RREB1Q92766 1687 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 H0YHG0 523 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 EXOC5O00471 708 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 SNRPA1P09661 255 aaKnown RBP8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 MAGEA8P43361 318 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 HSP90B2PQ58FF3 399 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 C1QTNF12Q5T7M4 302 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 DDX46Q7L014 1031 aaKnown RBP8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 TTC5Q8N0Z6 440 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 CLEC11AQ9Y240 323 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 RPS6KL1Q9Y6S9 549 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 ADCY9O60503 1353 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 ATRNO75882 1429 aa8.08□□□□□ -1.12
CUBNP3-201ENST00000457461 SBF2Q86WG5 1849 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 EIF2S2P20042 333 aaKnown RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 ZNF445P59923 1031 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 KIAA2012Q0VF49 1180 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 FKBP5Q13451 457 aaPredicted RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 CLEC17AQ6ZS10 378 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 NUTM1Q86Y26 1132 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 KLHL23Q8NBE8 558 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 LSM14AQ8ND56 463 aaKnown RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 NECTIN2Q92692 538 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 RBM42Q9BTD8 480 aaKnown RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 HYPKQ9NX55 129 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 CWC15Q9P013 229 aaKnown RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 CTNNA3Q9UI47 895 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 F6X3S4 739 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 DDB1Q16531 1140 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 ZSCAN26Q16670 478 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 PROSER3Q2NL68 480 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 ARMCX6Q7L4S7 300 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 SMC5Q8IY18 1101 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 TXLNBQ8N3L3 684 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 FAM184AQ8NB25 1140 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 NGLY1Q96IV0 654 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 C8orf37Q96NL8 207 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 RWDD1Q9H446 243 aaPredicted RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 SPTLC3Q9NUV7 552 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 TMOD3Q9NYL9 352 aa8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 DDX49Q9Y6V7 483 aaKnown RBP8.07□□□□□ -1.12
CUBNP3-201ENST00000457461 NHSQ6T4R5 1651 aa8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 AFDNP55196 1824 aaKnown RBP8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 C21orf2O43822 256 aa8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 COL5A3P25940 1745 aaPredicted RBP8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 STAG1Q8WVM7 1258 aa8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 PIGBQ92521 554 aa8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 AKT1S1Q96B36 256 aa8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 NOL10Q9BSC4 688 aaKnown RBP8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 BCL2L12Q9HB09 334 aa8.06□□□□□ -1.12
CUBNP3-201ENST00000457461 ZRANB2O95218 330 aaKnown RBP eCLIP8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 BIRC2Q13490 618 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 MAP9Q49MG5 647 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 SIRT2Q8IXJ6 389 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 MARCH10Q8NA82 808 aaPredicted RBP8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 SPDYE1Q8NFV5 336 aaPredicted RBP8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 DNAAF4Q8WXU2 420 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 MEIS3Q99687 375 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 USP16Q9Y5T5 823 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 CCP110O43303 1012 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 ANXA1P04083 346 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 SCP2P22307 547 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 HNRNPH2P55795 449 aaKnown RBP8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 TRAF1Q13077 416 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 BEND3Q5T5X7 828 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 MCTP2Q6DN12 878 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 KSR2Q6VAB6 950 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 IQUBQ8NA54 791 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 PIBF1Q8WXW3 757 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 USP21Q9UK80 565 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 SYNPO2Q9UMS6 1093 aa8.05□□□□□ -1.12
CUBNP3-201ENST00000457461 BTAF1O14981 1849 aa8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 MYH14Q7Z406 1995 aaKnown RBP8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 ANKRD36CQ5JPF3 1778 aa8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 SYNRGQ9UMZ2 1314 aa8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 PI4KAP2A4QPH2 592 aa8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 ONECUT3O60422 494 aaPredicted RBP8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 PAX7P23759 505 aa8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 PEX19P40855 299 aa8.04□□□□□ -1.12
CUBNP3-201ENST00000457461 ADCY2Q08462 1091 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms