RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 KSR2Q6VAB6 950 aa11.31□□□□□ -0.6
PKP4-207ENST00000457109 USP48Q86UV5 1035 aa11.31□□□□□ -0.6
PKP4-207ENST00000457109 C2orf69Q8N8R5 385 aa11.31□□□□□ -0.6
PKP4-207ENST00000457109 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
PKP4-207ENST00000457109 YDJCA8MPS7 323 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 ANP32CO43423 234 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 ATP2B4P23634 1241 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 ZEB1P37275 1124 aaPredicted RBP11.3□□□□□ -0.6
PKP4-207ENST00000457109 TBC1D10BQ4KMP7 808 aaPredicted RBP11.3□□□□□ -0.6
PKP4-207ENST00000457109 SAMD7Q7Z3H4 446 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 KRT26Q7Z3Y9 468 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 SAPCD2Q86UD0 394 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 SEC31BQ9NQW1 1179 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
PKP4-207ENST00000457109 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
PKP4-207ENST00000457109 SLC4A2P04920 1241 aa11.29□□□□□ -0.6
PKP4-207ENST00000457109 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
PKP4-207ENST00000457109 TWISTNBQ3B726 338 aaPredicted RBP11.29□□□□□ -0.6
PKP4-207ENST00000457109 SULF1Q8IWU6 871 aa11.29□□□□□ -0.6
PKP4-207ENST00000457109 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
PKP4-207ENST00000457109 TRPM4Q8TD43 1214 aa11.29□□□□□ -0.6
PKP4-207ENST00000457109 JARID2Q92833 1246 aaPredicted RBP11.29□□□□□ -0.6
PKP4-207ENST00000457109 COL4A5P29400 1685 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 VIL1P09327 827 aaKnown RBP11.28□□□□□ -0.6
PKP4-207ENST00000457109 HSPA8P11142 646 aaKnown RBP11.28□□□□□ -0.6
PKP4-207ENST00000457109 IGHMBP2P38935 993 aaKnown RBP11.28□□□□□ -0.6
PKP4-207ENST00000457109 HUNKP57058 714 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 NOGQ13253 232 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 CCDC27Q2M243 656 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 KIF4BQ2VIQ3 1234 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 MYH16Q9H6N6 1097 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 XDHP47989 1333 aa11.28□□□□□ -0.6
PKP4-207ENST00000457109 USP17L3A6NCW0 530 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 USP17L4A6NCW7 530 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 AOC2O75106 756 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 CTSWP56202 376 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 USP17L1Q7RTZ2 530 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 PODNQ7Z5L7 613 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 WWC1Q8IX03 1113 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 OGFOD1Q8N543 542 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 TSPYL6Q8N831 410 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 AGBL3Q8NEM8 1001 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 TSR2Q969E8 191 aaKnown RBP11.27□□□□□ -0.61
PKP4-207ENST00000457109 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 CCDC102AQ96A19 550 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 MPHOSPH8Q99549 860 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 GBA2Q9HCG7 927 aaPredicted RBP11.27□□□□□ -0.61
PKP4-207ENST00000457109 MRS2Q9HD23 443 aa11.27□□□□□ -0.61
PKP4-207ENST00000457109 SHTN1A0MZ66 631 aa11.26□□□□□ -0.61
PKP4-207ENST00000457109 USP17L8P0C7I0 530 aa11.26□□□□□ -0.61
PKP4-207ENST00000457109 KCNJ4P48050 445 aa11.26□□□□□ -0.61
PKP4-207ENST00000457109 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
PKP4-207ENST00000457109 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
PKP4-207ENST00000457109 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
PKP4-207ENST00000457109 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
PKP4-207ENST00000457109 KCNQ5Q9NR82 932 aa11.26□□□□□ -0.61
PKP4-207ENST00000457109 BSDC1Q9NW68 430 aaPredicted RBP11.26□□□□□ -0.61
PKP4-207ENST00000457109 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
PKP4-207ENST00000457109 SCARF1Q14162 830 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 NCBP3Q53F19 620 aaKnown RBP11.25□□□□□ -0.61
PKP4-207ENST00000457109 RGMBQ6NW40 437 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 UBE3BQ7Z3V4 1068 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 IL16Q14005 1332 aa11.25□□□□□ -0.61
PKP4-207ENST00000457109 NEURL1BA8MQ27 555 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 IGKV5-2P06315 115 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 CCT4P50991 539 aaKnown RBP11.24□□□□□ -0.61
PKP4-207ENST00000457109 CWF19L2Q2TBE0 894 aaKnown RBP11.24□□□□□ -0.61
PKP4-207ENST00000457109 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 ABHD8Q96I13 439 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 GGA3Q9NZ52 723 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 LEMD3Q9Y2U8 911 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 PCNTO95613 3336 aa11.24□□□□□ -0.61
PKP4-207ENST00000457109 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 ADM5C9JUS6 153 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 H7C1W4 665 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 NF2P35240 595 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 MMP14P50281 582 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 FLIIQ13045 1269 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 GCKRQ14397 625 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 ANGEL2Q5VTE6 544 aaKnown RBP11.23□□□□□ -0.61
PKP4-207ENST00000457109 REM2Q8IYK8 340 aaPredicted RBP11.23□□□□□ -0.61
PKP4-207ENST00000457109 COA1Q9GZY4 146 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 GREM2Q9H772 168 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 MYOZ2Q9NPC6 264 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 RTL9Q8NET4 1388 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 ADAMTSL1Q8N6G6 1762 aa11.23□□□□□ -0.61
PKP4-207ENST00000457109 ANKRD18BA2A2Z9 1011 aa11.22□□□□□ -0.61
PKP4-207ENST00000457109 ZNF280AP59817 542 aaPredicted RBP11.22□□□□□ -0.61
PKP4-207ENST00000457109 TTLL12Q14166 644 aaPredicted RBP11.22□□□□□ -0.61
PKP4-207ENST00000457109 TAF7LQ5H9L4 462 aa11.22□□□□□ -0.61
PKP4-207ENST00000457109 LINS1Q8NG48 757 aa11.22□□□□□ -0.61
PKP4-207ENST00000457109 MYO3BQ8WXR4 1341 aa11.22□□□□□ -0.61
PKP4-207ENST00000457109 DNAAF4Q8WXU2 420 aa11.22□□□□□ -0.61
PKP4-207ENST00000457109 CHMP3Q9Y3E7 222 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms