RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 FSIP1Q8NA03 581 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 PPP1R13BQ96KQ4 1090 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 ST7Q9NRC1 585 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 SFPQP23246 707 aaKnown RBP eCLIP16.01■□□□□ 0.15
PTPRE-204ENST00000455661 MLECQ14165 292 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 TEX35Q5T0J7 233 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 ENGASEQ8NFI3 743 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 SMARCC2Q8TAQ2 1214 aa16.01■□□□□ 0.15
PTPRE-204ENST00000455661 CEMIPQ8WUJ3 1361 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 ZBTB22O15209 634 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 CCP110O43303 1012 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 CYP2C19P33261 490 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 KCNJ6P48051 423 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 ME1P48163 572 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 E4F1Q66K89 784 aaPredicted RBP16■□□□□ 0.15
PTPRE-204ENST00000455661 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16■□□□□ 0.15
PTPRE-204ENST00000455661 U3KPZ7 1027 aaPredicted RBP16■□□□□ 0.15
PTPRE-204ENST00000455661 SMC2O95347 1197 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 CLCN6P51797 869 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 CCDC93Q567U6 631 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 KSR2Q6VAB6 950 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 NBPF11Q86T75 865 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 DNAJC2Q99543 621 aaKnown RBP16■□□□□ 0.15
PTPRE-204ENST00000455661 SDF4Q9BRK5 362 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 FHOD1Q9Y613 1164 aa16■□□□□ 0.15
PTPRE-204ENST00000455661 SCRN1Q12765 414 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 TMCO3Q6UWJ1 677 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 TMC6Q7Z403 805 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 USP28Q96RU2 1077 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 TLR7Q9NYK1 1049 aaKnown RBP15.99■□□□□ 0.15
PTPRE-204ENST00000455661 HOMER1Q86YM7 354 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
PTPRE-204ENST00000455661 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
PTPRE-204ENST00000455661 A0A087WWV3 80 aa15.98■□□□□ 0.15
PTPRE-204ENST00000455661 PFKFB2O60825 505 aa15.98■□□□□ 0.15
PTPRE-204ENST00000455661 HMGB1P09429 215 aaKnown RBP15.98■□□□□ 0.15
PTPRE-204ENST00000455661 PNMA6AP0CW24 399 aaPredicted RBP15.98■□□□□ 0.15
PTPRE-204ENST00000455661 TEFQ10587 303 aa15.98■□□□□ 0.15
PTPRE-204ENST00000455661 UBXN4Q92575 508 aa15.98■□□□□ 0.15
PTPRE-204ENST00000455661 TSPYL1Q9H0U9 437 aa15.98■□□□□ 0.15
PTPRE-204ENST00000455661 NWD1Q149M9 1564 aa15.98■□□□□ 0.15
PTPRE-204ENST00000455661 BTBD11A6QL63 1104 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 GRM8O00222 908 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 FOSBP53539 338 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 CWF19L2Q2TBE0 894 aaKnown RBP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 MRPS27Q92552 414 aaKnown RBP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 BPIFA3Q9BQP9 254 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 XPO4Q9C0E2 1151 aaKnown RBP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 TPM1P09493 284 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 NSUN7Q8NE18 718 aaKnown RBP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 SRRTQ9BXP5 876 aaKnown RBP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 SIL1Q9H173 461 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 BICC1Q9H694 974 aaKnown RBP15.97■□□□□ 0.15
PTPRE-204ENST00000455661 LGR6Q9HBX8 967 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 IFNKQ9P0W0 207 aa15.97■□□□□ 0.15
PTPRE-204ENST00000455661 PTPDC1A2A3K4 754 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 KCNQ3O43525 872 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 SLC20A2Q08357 652 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 ARMCX5Q6P1M9 558 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 USHBP1Q8N6Y0 703 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 MNS1Q8NEH6 495 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 CHMP4CQ96CF2 233 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.96■□□□□ 0.15
PTPRE-204ENST00000455661 MYH15Q9Y2K3 1946 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 FMR1NBQ8N0W7 255 aaPredicted RBP15.96■□□□□ 0.15
PTPRE-204ENST00000455661 LINS1Q8NG48 757 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 PHLPP2Q6ZVD8 1323 aa15.96■□□□□ 0.15
PTPRE-204ENST00000455661 TULP2O00295 520 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 PLA2G4AP47712 749 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 ETF1P62495 437 aaKnown RBP15.95■□□□□ 0.14
PTPRE-204ENST00000455661 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 ADALQ6DHV7 355 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 ERCC4Q92889 916 aaPredicted RBP15.95■□□□□ 0.14
PTPRE-204ENST00000455661 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.95■□□□□ 0.14
PTPRE-204ENST00000455661 KIAA1468Q9P260 1216 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 TMEM2Q9UHN6 1383 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 CYP21A2P08686 494 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 LRRC2Q9BYS8 371 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 ORC3Q9UBD5 711 aaPredicted RBP15.95■□□□□ 0.14
PTPRE-204ENST00000455661 ADAMTS13Q76LX8 1427 aa15.95■□□□□ 0.14
PTPRE-204ENST00000455661 A0A1W2PQ27 194 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 A0A1W2PQ64 194 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 A0A1W2PQD8 194 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 PIK3C2AO00443 1686 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 ATP8B1O43520 1251 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 DDX58O95786 925 aaKnown RBP15.94■□□□□ 0.14
PTPRE-204ENST00000455661 HNRNPH2P55795 449 aaKnown RBP15.94■□□□□ 0.14
PTPRE-204ENST00000455661 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
PTPRE-204ENST00000455661 DHX32Q7L7V1 743 aaKnown RBP15.94■□□□□ 0.14
PTPRE-204ENST00000455661 KDM3BQ7LBC6 1761 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 LRRN4CLQ8ND94 238 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 SYTL4Q96C24 671 aaPredicted RBP15.94■□□□□ 0.14
PTPRE-204ENST00000455661 DNAI1Q9UI46 699 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 PCDHA7Q9UN72 937 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 UTYO14607 1347 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 ZRANB2O95218 330 aaKnown RBP eCLIP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms