RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 TIMM44O43615 452 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 FOSP01100 380 aaPredicted RBP9.44□□□□□ -0.9
BRCC3-208ENST00000453705 NAP1L4Q99733 375 aaKnown RBP9.44□□□□□ -0.9
BRCC3-208ENST00000453705 MAPK8IP3Q9UPT6 1336 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 ANKRD13DQ6ZTN6 518 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 SEZ6LQ9BYH1 1024 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 CXorf56Q9H5V9 222 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 PTPRHQ9HD43 1115 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 HDAC9Q9UKV0 1011 aa9.44□□□□□ -0.9
BRCC3-208ENST00000453705 HSD3B2P26439 372 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 ALDH1L2Q3SY69 923 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 CCDC93Q567U6 631 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 PAF1Q8N7H5 531 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 FAM126AQ9BYI3 521 aaPredicted RBP9.43□□□□□ -0.9
BRCC3-208ENST00000453705 ALDH8A1Q9H2A2 487 aaPredicted RBP9.43□□□□□ -0.9
BRCC3-208ENST00000453705 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 USP19O94966 1318 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 IGSF1Q8N6C5 1336 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 SCAMP3O14828 347 aaKnown RBP9.43□□□□□ -0.9
BRCC3-208ENST00000453705 ABCA3Q99758 1704 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 C1orf167Q5SNV9 1468 aa9.43□□□□□ -0.9
BRCC3-208ENST00000453705 PARP4Q9UKK3 1724 aaKnown RBP9.42□□□□□ -0.9
BRCC3-208ENST00000453705 VDRP11473 427 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 RARSP54136 660 aaKnown RBP9.42□□□□□ -0.9
BRCC3-208ENST00000453705 MRPL58Q14197 206 aaKnown RBP9.42□□□□□ -0.9
BRCC3-208ENST00000453705 RPAINQ86UA6 219 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 AVENQ9NQS1 362 aaPredicted RBP9.42□□□□□ -0.9
BRCC3-208ENST00000453705 TMEM51Q9NW97 253 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 SOS1Q07889 1333 aaPredicted RBP9.42□□□□□ -0.9
BRCC3-208ENST00000453705 KIAA0232Q92628 1395 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 HTATSF1O43719 755 aaKnown RBP9.42□□□□□ -0.9
BRCC3-208ENST00000453705 ZBED6P86452 979 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 MKL1Q969V6 931 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 LZTS1Q9Y250 596 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 NHSL1Q5SYE7 1610 aa9.42□□□□□ -0.9
BRCC3-208ENST00000453705 GPR37L1O60883 481 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 DNAJC6O75061 913 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 SF3B2Q13435 895 aaKnown RBP9.41□□□□□ -0.9
BRCC3-208ENST00000453705 DRC7Q8IY82 874 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 RASEFQ8IZ41 740 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 FEZ2Q9UHY8 353 aaPredicted RBP9.41□□□□□ -0.9
BRCC3-208ENST00000453705 PKD1L3Q7Z443 1732 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 SMAPO00193 183 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 GNPATO15228 680 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 HSP90AB3PQ58FF7 597 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
BRCC3-208ENST00000453705 EXOC6Q8TAG9 804 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 EMILIN1Q9Y6C2 1016 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 TMEM94Q12767 1356 aa9.41□□□□□ -0.9
BRCC3-208ENST00000453705 RGS3P49796 1198 aa9.4□□□□□ -0.9
BRCC3-208ENST00000453705 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-208ENST00000453705 ZRSR2Q15696 482 aaKnown RBP9.4□□□□□ -0.9
BRCC3-208ENST00000453705 BABAM1Q9NWV8 329 aa9.4□□□□□ -0.9
BRCC3-208ENST00000453705 MAFBQ9Y5Q3 323 aaPredicted RBP9.4□□□□□ -0.9
BRCC3-208ENST00000453705 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
BRCC3-208ENST00000453705 EIF4A2Q14240 407 aaKnown RBP9.4□□□□□ -0.9
BRCC3-208ENST00000453705 CASS4Q9NQ75 786 aa9.4□□□□□ -0.9
BRCC3-208ENST00000453705 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.9
BRCC3-208ENST00000453705 RGPD2P0DJD1 1756 aa9.4□□□□□ -0.9
BRCC3-208ENST00000453705 CRB1P82279 1406 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-208ENST00000453705 FAM160A1Q05DH4 1040 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 CENPQQ7L2Z9 268 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-208ENST00000453705 ZSCAN30Q86W11 494 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 SVIPQ8NHG7 77 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 ARHGAP45Q92619 1136 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 CRBNQ96SW2 442 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 IFRD1O00458 451 aaPredicted RBP9.39□□□□□ -0.91
BRCC3-208ENST00000453705 NPHP1O15259 732 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 BPNT1O95861 308 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 SRGNP10124 158 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 PGBD3Q8N328 593 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 BRINP2Q9C0B6 783 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 C19orf44Q9H6X5 657 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 LIMD1Q9UGP4 676 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 MSH6P52701 1360 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 PXDNQ92626 1479 aa9.39□□□□□ -0.91
BRCC3-208ENST00000453705 NAT1P18440 290 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 PRKAR2BP31323 418 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 GNAI1P63096 354 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 ZNF211Q13398 564 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-208ENST00000453705 NBPF6Q5VWK0 638 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 LMBRD2Q68DH5 695 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-208ENST00000453705 FERMT3Q86UX7 667 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 NBPF5PQ86XG9 351 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-208ENST00000453705 TRIM44Q96DX7 344 aaPredicted RBP9.38□□□□□ -0.91
BRCC3-208ENST00000453705 BORCS6Q96GS4 357 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 NBPF4Q96M43 638 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 RNASEH2AO75792 299 aaKnown RBP9.38□□□□□ -0.91
BRCC3-208ENST00000453705 RIPK4P57078 832 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 C8orf48Q96LL4 319 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
BRCC3-208ENST00000453705 RBL2Q08999 1139 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms