RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 ITGBL1O95965 494 aaPredicted RBP21.64■■□□□ 1.05
PRPF40A-204ENST00000450303 GMPSP49915 693 aaPredicted RBP21.64■■□□□ 1.05
PRPF40A-204ENST00000450303 LINS1Q8NG48 757 aa21.64■■□□□ 1.05
PRPF40A-204ENST00000450303 GREM2Q9H772 168 aa21.64■■□□□ 1.05
PRPF40A-204ENST00000450303 TNIP1Q15025 636 aa21.63■■□□□ 1.05
PRPF40A-204ENST00000450303 CNTROBQ8N137 903 aa21.63■■□□□ 1.05
PRPF40A-204ENST00000450303 EYA3Q99504 573 aa21.63■■□□□ 1.05
PRPF40A-204ENST00000450303 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
PRPF40A-204ENST00000450303 GPRC5DQ9NZD1 345 aa21.63■■□□□ 1.05
PRPF40A-204ENST00000450303 PASKQ96RG2 1323 aa21.62■■□□□ 1.05
PRPF40A-204ENST00000450303 UFL1O94874 794 aa21.62■■□□□ 1.05
PRPF40A-204ENST00000450303 KCNQ5Q9NR82 932 aa21.62■■□□□ 1.05
PRPF40A-204ENST00000450303 PODXL2Q9NZ53 605 aa21.62■■□□□ 1.05
PRPF40A-204ENST00000450303 CT47B1P0C2W7 299 aaPredicted RBP21.61■■□□□ 1.05
PRPF40A-204ENST00000450303 CASP7P55210 303 aa21.61■■□□□ 1.05
PRPF40A-204ENST00000450303 CDC5LQ99459 802 aaKnown RBP21.61■■□□□ 1.05
PRPF40A-204ENST00000450303 ZC3H12CQ9C0D7 883 aaKnown RBP21.61■■□□□ 1.05
PRPF40A-204ENST00000450303 GGA1Q9UJY5 639 aa21.61■■□□□ 1.05
PRPF40A-204ENST00000450303 ZBTB12Q9Y330 459 aaPredicted RBP21.61■■□□□ 1.05
PRPF40A-204ENST00000450303 SHTN1A0MZ66 631 aa21.6■■□□□ 1.05
PRPF40A-204ENST00000450303 ECE2O60344 883 aa21.6■■□□□ 1.05
PRPF40A-204ENST00000450303 BEND3Q5T5X7 828 aa21.6■■□□□ 1.05
PRPF40A-204ENST00000450303 USP50Q70EL3 339 aaPredicted RBP21.6■■□□□ 1.05
PRPF40A-204ENST00000450303 ADARB2Q9NS39 739 aaKnown RBP21.6■■□□□ 1.05
PRPF40A-204ENST00000450303 WTIPA6NIX2 430 aaPredicted RBP21.59■■□□□ 1.05
PRPF40A-204ENST00000450303 G3V3G9 751 aa21.59■■□□□ 1.05
PRPF40A-204ENST00000450303 PSMD14O00487 310 aa21.59■■□□□ 1.05
PRPF40A-204ENST00000450303 DCAF8Q5TAQ9 597 aa21.59■■□□□ 1.05
PRPF40A-204ENST00000450303 CREBZFQ9NS37 354 aa21.59■■□□□ 1.05
PRPF40A-204ENST00000450303 MKRN1Q9UHC7 482 aaKnown RBP21.59■■□□□ 1.05
PRPF40A-204ENST00000450303 FMR1Q06787 632 aaKnown RBP eCLIP21.58■■□□□ 1.053e-7■■■■□ 19.7
PRPF40A-204ENST00000450303 SLC4A10Q6U841 1118 aa21.58■■□□□ 1.05
PRPF40A-204ENST00000450303 JMYQ8N9B5 988 aa21.58■■□□□ 1.05
PRPF40A-204ENST00000450303 PLA2G12BQ9BX93 195 aa21.58■■□□□ 1.05
PRPF40A-204ENST00000450303 CNOT7Q9UIV1 285 aaKnown RBP21.58■■□□□ 1.05
PRPF40A-204ENST00000450303 MINPP1Q9UNW1 487 aa21.58■■□□□ 1.05
PRPF40A-204ENST00000450303 XDHP47989 1333 aa21.57■■□□□ 1.04
PRPF40A-204ENST00000450303 ITGA6P23229 1130 aa21.57■■□□□ 1.04
PRPF40A-204ENST00000450303 FAM161AQ3B820 660 aa21.57■■□□□ 1.04
PRPF40A-204ENST00000450303 BSDC1Q9NW68 430 aaPredicted RBP21.57■■□□□ 1.04
PRPF40A-204ENST00000450303 SCN9AQ15858 1988 aa21.56■■□□□ 1.04
PRPF40A-204ENST00000450303 TMEM88BA6NKF7 163 aa21.56■■□□□ 1.04
PRPF40A-204ENST00000450303 CSF1RP07333 972 aa21.56■■□□□ 1.04
PRPF40A-204ENST00000450303 ATP2B4P23634 1241 aa21.56■■□□□ 1.04
PRPF40A-204ENST00000450303 RTL9Q8NET4 1388 aa21.56■■□□□ 1.04
PRPF40A-204ENST00000450303 IGHMBP2P38935 993 aaKnown RBP21.55■■□□□ 1.04
PRPF40A-204ENST00000450303 HIRAP54198 1017 aaPredicted RBP21.55■■□□□ 1.04
PRPF40A-204ENST00000450303 MICALL2Q8IY33 904 aa21.55■■□□□ 1.04
PRPF40A-204ENST00000450303 MRPL50Q8N5N7 158 aaKnown RBP21.55■■□□□ 1.04
PRPF40A-204ENST00000450303 TRPM4Q8TD43 1214 aa21.55■■□□□ 1.04
PRPF40A-204ENST00000450303 H7C1D1 291 aa21.54■■□□□ 1.04
PRPF40A-204ENST00000450303 TRAF5O00463 557 aa21.54■■□□□ 1.04
PRPF40A-204ENST00000450303 FOXO4P98177 505 aa21.54■■□□□ 1.04
PRPF40A-204ENST00000450303 CHMP3Q9Y3E7 222 aa21.54■■□□□ 1.04
PRPF40A-204ENST00000450303 CCT4P50991 539 aaKnown RBP21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 EPHA10Q5JZY3 1008 aa21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 RBM26Q5T8P6 1007 aaKnown RBP21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 SAMD7Q7Z3H4 446 aa21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 MPHOSPH8Q99549 860 aa21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 SRCIN1Q9C0H9 1055 aa21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 C9orf78Q9NZ63 289 aaPredicted RBP21.52■■□□□ 1.04
PRPF40A-204ENST00000450303 ANKRD18BA2A2Z9 1011 aa21.51■■□□□ 1.03
PRPF40A-204ENST00000450303 GRM8O00222 908 aa21.51■■□□□ 1.03
PRPF40A-204ENST00000450303 TBC1D10BQ4KMP7 808 aaPredicted RBP21.51■■□□□ 1.03
PRPF40A-204ENST00000450303 LMBR1LQ6UX01 489 aa21.51■■□□□ 1.03
PRPF40A-204ENST00000450303 DPF2Q92785 391 aa21.51■■□□□ 1.03
PRPF40A-204ENST00000450303 ALDH1L1O75891 902 aa21.5■■□□□ 1.03
PRPF40A-204ENST00000450303 EGFRP00533 1210 aa21.5■■□□□ 1.03
PRPF40A-204ENST00000450303 VIL1P09327 827 aaKnown RBP21.5■■□□□ 1.03
PRPF40A-204ENST00000450303 GLIS2Q9BZE0 524 aaPredicted RBP21.5■■□□□ 1.03
PRPF40A-204ENST00000450303 TRPM7Q96QT4 1865 aa21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 CNTNAP1P78357 1384 aa21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 IFIT5Q13325 482 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 ALDH1L2Q3SY69 923 aa21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 TXNRD3Q86VQ6 643 aa21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 RCAN3Q9UKA8 241 aa21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 ABT1Q9ULW3 272 aaKnown RBP21.49■■□□□ 1.03
PRPF40A-204ENST00000450303 POLR2AP24928 1970 aaKnown RBP21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 RPS12P25398 132 aaKnown RBP21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 CHRNDQ07001 517 aa21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 HELBQ8NG08 1087 aaPredicted RBP21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 ZNF594Q96JF6 807 aaPredicted RBP21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 ANKRD2Q9GZV1 360 aa21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 PGAP2Q9UHJ9 254 aa21.48■■□□□ 1.03
PRPF40A-204ENST00000450303 KLRK1P26718 216 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 VEGFBP49765 207 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 CST9Q5W186 159 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 SUCLG2Q96I99 432 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 LEMD3Q9Y2U8 911 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 PSME4Q14997 1843 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 ZNF804BA4D1E1 1349 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 MED23Q9ULK4 1368 aa21.47■■□□□ 1.03
PRPF40A-204ENST00000450303 SNAP23O00161 211 aa21.46■■□□□ 1.03
PRPF40A-204ENST00000450303 TAF5LO75529 589 aa21.46■■□□□ 1.03
PRPF40A-204ENST00000450303 NBPF7P0C2Y1 421 aaPredicted RBP21.46■■□□□ 1.03
PRPF40A-204ENST00000450303 HSPA1AP0DMV8 641 aaKnown RBP21.46■■□□□ 1.03
PRPF40A-204ENST00000450303 HSPA1BP0DMV9 641 aaKnown RBP21.46■■□□□ 1.03
PRPF40A-204ENST00000450303 DEFB115Q30KQ5 88 aa21.46■■□□□ 1.03
PRPF40A-204ENST00000450303 RSBN1LQ6PCB5 846 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms