RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 POTEJP0CG39 1038 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 SSRP1Q08945 709 aaKnown RBP15.92■□□□□ 0.14
ITGB4-202ENST00000449880 CCDC121Q6ZUS5 278 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 SEC63Q9UGP8 760 aaKnown RBP15.92■□□□□ 0.14
ITGB4-202ENST00000449880 BMP15O95972 392 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 SYT1P21579 422 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 PTGS1P23219 599 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 KLHL10Q6JEL2 608 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 ANKS4BQ8N8V4 417 aa15.92■□□□□ 0.14
ITGB4-202ENST00000449880 CDC42BPAQ5VT25 1732 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 GBP6Q6ZN66 633 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 OTUD6BQ8N6M0 293 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 SEPT11Q9NVA2 429 aaKnown RBP15.91■□□□□ 0.14
ITGB4-202ENST00000449880 TFIP11Q9UBB9 837 aaKnown RBP15.91■□□□□ 0.14
ITGB4-202ENST00000449880 HLTFQ14527 1009 aaKnown RBP eCLIP15.91■□□□□ 0.14
ITGB4-202ENST00000449880 CRACR2BQ8N4Y2 399 aaPredicted RBP15.91■□□□□ 0.14
ITGB4-202ENST00000449880 NEBLO76041 1014 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 SPECC1Q5M775 1068 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 PPM1EQ8WY54 764 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 CCDC113Q9H0I3 377 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 RBSNQ9H1K0 784 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 POLR3DP05423 398 aaPredicted RBP15.91■□□□□ 0.14
ITGB4-202ENST00000449880 SPATA24Q86W54 205 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 VPS18Q9P253 973 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 TBX22Q9Y458 520 aa15.91■□□□□ 0.14
ITGB4-202ENST00000449880 MCM6Q14566 821 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 B4GALNT4Q76KP1 1039 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 CADPS2Q86UW7 1296 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 BCCIPQ9P287 314 aaKnown RBP eCLIP15.9■□□□□ 0.14
ITGB4-202ENST00000449880 TSPYL6Q8N831 410 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 ANKRD44Q8N8A2 993 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 DACT1Q9NYF0 836 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 PI4KAP2A4QPH2 592 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 PI4KAP1Q8N8J0 262 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
ITGB4-202ENST00000449880 MEIS3Q99687 375 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 CCDC50Q8IVM0 306 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 MKNK2Q9HBH9 465 aa15.9■□□□□ 0.14
ITGB4-202ENST00000449880 RSRC1Q96IZ7 334 aaKnown RBP15.9■□□□□ 0.14
ITGB4-202ENST00000449880 KRBA2Q6ZNG9 492 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 SYKP43405 635 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 DNAJC25Q9H1X3 360 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 JADE2Q9NQC1 790 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 A0A1B0GUA9 196 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 GOLGA8BA8MQT2 603 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 KRT83P78385 493 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 CPLX3Q8WVH0 158 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 AMPD3Q01432 767 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 C10orf67Q8IYJ2 551 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 AOPEPQ8N6M6 819 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 BOLA2Q9H3K6 86 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 MYOM2P54296 1465 aa15.89■□□□□ 0.13
ITGB4-202ENST00000449880 RIOK3O14730 519 aaKnown RBP15.88■□□□□ 0.13
ITGB4-202ENST00000449880 PPP1R42Q7Z4L9 355 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 CCDC155Q8N6L0 562 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 IL13P35225 146 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 CCDC129Q6ZRS4 1044 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 SLF2Q8IX21 1173 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 GOPCQ9HD26 462 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 YEATS2Q9ULM3 1422 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 MKRN1Q9UHC7 482 aaKnown RBP15.88■□□□□ 0.13
ITGB4-202ENST00000449880 MAGI2Q86UL8 1455 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 MAP3K12Q12852 859 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 PPP4R3AQ6IN85 833 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 PDE1AP54750 535 aa15.88■□□□□ 0.13
ITGB4-202ENST00000449880 CCDC8Q9H0W5 538 aaPredicted RBP15.88■□□□□ 0.13
ITGB4-202ENST00000449880 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
ITGB4-202ENST00000449880 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 CHPF2Q9P2E5 772 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 IMPACTQ9P2X3 320 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 BIN1O00499 593 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 IFIT5Q13325 482 aaKnown RBP15.87■□□□□ 0.13
ITGB4-202ENST00000449880 EYA1Q99502 592 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 LRRC27Q9C0I9 530 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 NAPBQ9H115 298 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 TMX1Q9H3N1 280 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 STAMBPO95630 424 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 KCNA6P17658 529 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 DZIP1Q86YF9 867 aaKnown RBP15.87■□□□□ 0.13
ITGB4-202ENST00000449880 SLC12A7Q9Y666 1083 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 CFAP65Q6ZU64 1925 aaKnown RBP15.87■□□□□ 0.13
ITGB4-202ENST00000449880 SYNMO15061 1565 aa15.87■□□□□ 0.13
ITGB4-202ENST00000449880 TDRD12Q587J7 1177 aaKnown RBP15.87■□□□□ 0.13
ITGB4-202ENST00000449880 LIG1P18858 919 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 MTIF2P46199 727 aaKnown RBP15.86■□□□□ 0.13
ITGB4-202ENST00000449880 RTL1A6NKG5 1358 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 TACC1O75410 805 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 TTC14Q96N46 770 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 ZBTB40Q9NUA8 1239 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 ANKIB1Q9P2G1 1089 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 A0A087WZG4 1122 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 IBSPP21815 317 aaPredicted RBP15.86■□□□□ 0.13
ITGB4-202ENST00000449880 UGGT1Q9NYU2 1555 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 MAP3K19Q56UN5 1328 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms