RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SBF2Q86WG5 1849 aa7.82□□□□□ -1.16
SDCBP-205ENST00000447267 C10orf71Q711Q0 1435 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 ZBTB7CA1YPR0 619 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 ADH1AP07327 375 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 VEGFAP15692 232 aaPredicted RBP7.81□□□□□ -1.16
SDCBP-205ENST00000447267 DGKZQ13574 1117 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.81□□□□□ -1.16
SDCBP-205ENST00000447267 RNF217Q8TC41 542 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 CYLDQ9NQC7 956 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 RNF181Q9P0P0 153 aa7.81□□□□□ -1.16
SDCBP-205ENST00000447267 BCL9O00512 1426 aa7.8□□□□□ -1.16
SDCBP-205ENST00000447267 A0A0G2JLW4 131 aa7.8□□□□□ -1.16
SDCBP-205ENST00000447267 ZSCAN1Q8NBB4 408 aa7.8□□□□□ -1.16
SDCBP-205ENST00000447267 PNMA1Q8ND90 353 aa7.8□□□□□ -1.16
SDCBP-205ENST00000447267 PCDHB9Q9Y5E1 797 aa7.8□□□□□ -1.16
SDCBP-205ENST00000447267 PXDNLA1KZ92 1463 aa7.8□□□□□ -1.16
SDCBP-205ENST00000447267 KIF1AQ12756 1690 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 ACIN1Q9UKV3 1341 aaKnown RBP7.79□□□□□ -1.16
SDCBP-205ENST00000447267 COL24A1Q17RW2 1714 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 SLC35F4A4IF30 521 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 EXOC5O00471 708 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 SAFB2Q14151 953 aaKnown RBP eCLIP7.79□□□□□ -1.16
SDCBP-205ENST00000447267 TMEM132EQ6IEE7 984 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 TOM1L2Q6ZVM7 507 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 CCDC155Q8N6L0 562 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 BANK1Q8NDB2 785 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 GPRASP1Q5JY77 1395 aa7.79□□□□□ -1.16
SDCBP-205ENST00000447267 MYOM3Q5VTT5 1437 aa7.78□□□□□ -1.16
SDCBP-205ENST00000447267 PTGIRP43119 386 aa7.78□□□□□ -1.16
SDCBP-205ENST00000447267 MAP2K1Q02750 393 aaPredicted RBP7.78□□□□□ -1.16
SDCBP-205ENST00000447267 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
SDCBP-205ENST00000447267 PARP4Q9UKK3 1724 aaKnown RBP7.78□□□□□ -1.16
SDCBP-205ENST00000447267 USP6P35125 1406 aa7.78□□□□□ -1.16
SDCBP-205ENST00000447267 PLEKHG2Q9H7P9 1386 aa7.77□□□□□ -1.17
SDCBP-205ENST00000447267 SCTRP47872 440 aa7.77□□□□□ -1.17
SDCBP-205ENST00000447267 CRB1P82279 1406 aa7.77□□□□□ -1.17
SDCBP-205ENST00000447267 PRR36Q9H6K5 1346 aa7.77□□□□□ -1.17
SDCBP-205ENST00000447267 BRD4O60885 1362 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-205ENST00000447267 NR1H3Q13133 447 aa7.76□□□□□ -1.17
SDCBP-205ENST00000447267 RNFT1Q5M7Z0 435 aa7.76□□□□□ -1.17
SDCBP-205ENST00000447267 NGDNQ8NEJ9 315 aaKnown RBP7.76□□□□□ -1.17
SDCBP-205ENST00000447267 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
SDCBP-205ENST00000447267 WDR33Q9C0J8 1336 aaKnown RBP7.76□□□□□ -1.17
SDCBP-205ENST00000447267 CICQ96RK0 1608 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-205ENST00000447267 ANKRD30AQ9BXX3 1397 aa7.75□□□□□ -1.17
SDCBP-205ENST00000447267 PRKCSHP14314 528 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-205ENST00000447267 DEFB115Q30KQ5 88 aa7.75□□□□□ -1.17
SDCBP-205ENST00000447267 NBPF15Q8N660 670 aa7.75□□□□□ -1.17
SDCBP-205ENST00000447267 NANOS1Q8WY41 292 aaKnown RBP7.75□□□□□ -1.17
SDCBP-205ENST00000447267 CUEDC1Q9NWM3 386 aaPredicted RBP7.75□□□□□ -1.17
SDCBP-205ENST00000447267 LRRC37A3O60309 1634 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 DPEP1P16444 411 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 ERVK-9P63128 1117 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 NDUFB9Q9Y6M9 179 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 FMN2Q9NZ56 1722 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 COL5A2P05997 1499 aaPredicted RBP7.74□□□□□ -1.17
SDCBP-205ENST00000447267 IQGAP3Q86VI3 1631 aa7.74□□□□□ -1.17
SDCBP-205ENST00000447267 ANKRD30BQ9BXX2 1392 aa7.73□□□□□ -1.17
SDCBP-205ENST00000447267 GLTPD2A6NH11 291 aa7.73□□□□□ -1.17
SDCBP-205ENST00000447267 TMEM88BA6NKF7 163 aa7.73□□□□□ -1.17
SDCBP-205ENST00000447267 ITGA6P23229 1130 aa7.73□□□□□ -1.17
SDCBP-205ENST00000447267 GRM1Q13255 1194 aa7.73□□□□□ -1.17
SDCBP-205ENST00000447267 IRF5Q13568 498 aa7.73□□□□□ -1.17
SDCBP-205ENST00000447267 TRPM3Q9HCF6 1732 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-205ENST00000447267 VWA5B2Q8N398 1253 aa7.72□□□□□ -1.17
SDCBP-205ENST00000447267 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
SDCBP-205ENST00000447267 CDCA7Q9BWT1 371 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-205ENST00000447267 COL25A1Q9BXS0 654 aaPredicted RBP7.72□□□□□ -1.17
SDCBP-205ENST00000447267 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
SDCBP-205ENST00000447267 ALS2Q96Q42 1657 aa7.72□□□□□ -1.17
SDCBP-205ENST00000447267 RGPD8O14715 1765 aaPredicted RBP7.71□□□□□ -1.17
SDCBP-205ENST00000447267 RHOQP17081 205 aa7.71□□□□□ -1.18
SDCBP-205ENST00000447267 TSGA10IPQ3SY00 556 aa7.71□□□□□ -1.18
SDCBP-205ENST00000447267 AMIGO3Q86WK7 504 aa7.71□□□□□ -1.18
SDCBP-205ENST00000447267 CCDC85AQ96PX6 553 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-205ENST00000447267 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
SDCBP-205ENST00000447267 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.18
SDCBP-205ENST00000447267 PASKQ96RG2 1323 aa7.71□□□□□ -1.18
SDCBP-205ENST00000447267 ABCC11Q96J66 1382 aa7.71□□□□□ -1.18
SDCBP-205ENST00000447267 DAPK1P53355 1430 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 RASSF10A6NK89 507 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 ATP5J2-PTCD1G3V325 749 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 TRAK2O60296 914 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 GCP02774 474 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 RNF144AP50876 292 aaPredicted RBP7.7□□□□□ -1.18
SDCBP-205ENST00000447267 RASSF7Q02833 373 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 CC2D2BQ6DHV5 1058 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 PCDHB11Q9Y5F2 797 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 CPDO75976 1380 aa7.7□□□□□ -1.18
SDCBP-205ENST00000447267 ANKRD50Q9ULJ7 1429 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 CRYBG1Q9Y4K1 1723 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 TGFB2P61812 414 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 PRICKLE2Q7Z3G6 844 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 WHAMMQ8TF30 809 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 SYTL4Q96C24 671 aaPredicted RBP7.69□□□□□ -1.18
SDCBP-205ENST00000447267 CLTCL1P53675 1640 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 E9PCH4 1651 aa7.69□□□□□ -1.18
SDCBP-205ENST00000447267 MEN1O00255 615 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms