RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ZKSCAN1P17029 563 aaPredicted RBP20.97■□□□□ 0.95
SMC6-206ENST00000446852 LDHAL6AQ6ZMR3 332 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 CCDC129Q6ZRS4 1044 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 XAGE2Q96GT9 111 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 TAF6LQ9Y6J9 622 aa20.97■□□□□ 0.95
SMC6-206ENST00000446852 COL9A3Q14050 684 aaPredicted RBP20.96■□□□□ 0.95
SMC6-206ENST00000446852 PTF1AQ7RTS3 328 aa20.96■□□□□ 0.95
SMC6-206ENST00000446852 AKAP11Q9UKA4 1901 aa20.96■□□□□ 0.95
SMC6-206ENST00000446852 SLFNL1Q499Z3 407 aa20.96■□□□□ 0.95
SMC6-206ENST00000446852 LARP6Q9BRS8 491 aaKnown RBP20.96■□□□□ 0.95
SMC6-206ENST00000446852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.95■□□□□ 0.94
SMC6-206ENST00000446852 MYH7P12883 1935 aa20.95■□□□□ 0.94
SMC6-206ENST00000446852 SH3TC1Q8TE82 1336 aa20.95■□□□□ 0.94
SMC6-206ENST00000446852 MCMDC2Q4G0Z9 681 aa20.95■□□□□ 0.94
SMC6-206ENST00000446852 METTL24Q5JXM2 366 aa20.95■□□□□ 0.94
SMC6-206ENST00000446852 USP21Q9UK80 565 aa20.95■□□□□ 0.94
SMC6-206ENST00000446852 SPATA31A6Q5VVP1 1343 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 FAM177BA6PVY3 158 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 VPS53Q5VIR6 699 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 USPL1Q5W0Q7 1092 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 LINC00116Q8NCU8 138 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 CYP46A1Q9Y6A2 500 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 NHSQ6T4R5 1651 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 HCLS1P14317 486 aaPredicted RBP20.94■□□□□ 0.94
SMC6-206ENST00000446852 KCNQ4P56696 695 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 VGLL2Q8N8G2 317 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 LIMCH1Q9UPQ0 1083 aa20.94■□□□□ 0.94
SMC6-206ENST00000446852 CASZ1Q86V15 1759 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 ATP2B3Q16720 1220 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 CCDC158Q5M9N0 1113 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 GORABQ5T7V8 394 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 CNNM1Q9NRU3 951 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 PDRG1Q9NUG6 133 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 SCARF1Q14162 830 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 TTC39AQ5SRH9 613 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 RNF20Q5VTR2 975 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 AK7Q96M32 723 aa20.93■□□□□ 0.94
SMC6-206ENST00000446852 ARAP2Q8WZ64 1704 aa20.92■□□□□ 0.94
SMC6-206ENST00000446852 LARGE1O95461 756 aa20.92■□□□□ 0.94
SMC6-206ENST00000446852 UTP14AQ9BVJ6 771 aaKnown RBP20.92■□□□□ 0.94
SMC6-206ENST00000446852 GZF1Q9H116 711 aaPredicted RBP20.92■□□□□ 0.94
SMC6-206ENST00000446852 LAMA4Q16363 1823 aa20.91■□□□□ 0.94
SMC6-206ENST00000446852 MYO5AQ9Y4I1 1855 aaKnown RBP20.91■□□□□ 0.94
SMC6-206ENST00000446852 FKBP4Q02790 459 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMC6-206ENST00000446852 PARP10Q53GL7 1025 aa20.91■□□□□ 0.94
SMC6-206ENST00000446852 ZMYM1Q5SVZ6 1142 aa20.91■□□□□ 0.94
SMC6-206ENST00000446852 TICAM2Q86XR7 235 aa20.91■□□□□ 0.94
SMC6-206ENST00000446852 HMG20BQ9P0W2 317 aa20.91■□□□□ 0.94
SMC6-206ENST00000446852 NIP7Q9Y221 180 aaKnown RBP eCLIP20.91■□□□□ 0.94
SMC6-206ENST00000446852 NTSR2O95665 410 aa20.9■□□□□ 0.94
SMC6-206ENST00000446852 TSGA10IPQ3SY00 556 aa20.9■□□□□ 0.94
SMC6-206ENST00000446852 HELLSQ9NRZ9 838 aa20.9■□□□□ 0.94
SMC6-206ENST00000446852 SCN7AQ01118 1682 aa20.9■□□□□ 0.94
SMC6-206ENST00000446852 BRD1O95696 1058 aa20.89■□□□□ 0.94
SMC6-206ENST00000446852 ABCC12Q96J65 1359 aa20.89■□□□□ 0.94
SMC6-206ENST00000446852 SBF2Q86WG5 1849 aa20.89■□□□□ 0.94
SMC6-206ENST00000446852 PSMA5P28066 241 aa20.89■□□□□ 0.93
SMC6-206ENST00000446852 FAM182BQ5T319 152 aa20.89■□□□□ 0.93
SMC6-206ENST00000446852 PI16Q6UXB8 463 aa20.89■□□□□ 0.93
SMC6-206ENST00000446852 MAST3O60307 1309 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 RNF113AO15541 343 aaKnown RBP20.88■□□□□ 0.93
SMC6-206ENST00000446852 PDE8BO95263 885 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 FOXD4L5Q5VV16 416 aaPredicted RBP20.88■□□□□ 0.93
SMC6-206ENST00000446852 MCTP1Q6DN14 999 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 FOXD4L4Q8WXT5 416 aaPredicted RBP20.88■□□□□ 0.93
SMC6-206ENST00000446852 U3KPZ7 1027 aaPredicted RBP20.88■□□□□ 0.93
SMC6-206ENST00000446852 GOLGA6L22H0YM25 854 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 PTMSP20962 102 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 CHAMP1Q96JM3 812 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 COL4A1P02462 1669 aa20.88■□□□□ 0.93
SMC6-206ENST00000446852 ZAP70P43403 619 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 BLOC1S2Q6QNY1 142 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 TCEANC2Q96MN5 208 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 SEC31BQ9NQW1 1179 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 TAF1LQ8IZX4 1826 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 CYP21A2P08686 494 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 RPS6KB1P23443 525 aa20.87■□□□□ 0.93
SMC6-206ENST00000446852 MCAMP43121 646 aa20.86■□□□□ 0.93
SMC6-206ENST00000446852 ZNF652Q9Y2D9 606 aa20.86■□□□□ 0.93
SMC6-206ENST00000446852 M0R2C6 588 aa20.86■□□□□ 0.93
SMC6-206ENST00000446852 ST3GAL1Q11201 340 aa20.86■□□□□ 0.93
SMC6-206ENST00000446852 SMIM5Q71RC9 77 aa20.86■□□□□ 0.93
SMC6-206ENST00000446852 HELBQ8NG08 1087 aaPredicted RBP20.86■□□□□ 0.93
SMC6-206ENST00000446852 LY75O60449 1722 aa20.86■□□□□ 0.93
SMC6-206ENST00000446852 TAF1P21675 1872 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 ME3Q16798 604 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 SKOR2Q2VWA4 1001 aaPredicted RBP20.85■□□□□ 0.93
SMC6-206ENST00000446852 TPCN1Q9ULQ1 816 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 MROH5Q6ZUA9 1318 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 CLEC4GQ6UXB4 293 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 OSBP2Q969R2 916 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 ZSCAN31Q96LW9 406 aaPredicted RBP20.85■□□□□ 0.93
SMC6-206ENST00000446852 DSCC1Q9BVC3 393 aa20.85■□□□□ 0.93
SMC6-206ENST00000446852 TCHHQ07283 1943 aa20.84■□□□□ 0.93
SMC6-206ENST00000446852 SH2B1Q9NRF2 756 aaPredicted RBP20.84■□□□□ 0.93
SMC6-206ENST00000446852 RTL9Q8NET4 1388 aa20.84■□□□□ 0.93
SMC6-206ENST00000446852 FGFR2P21802 821 aa20.84■□□□□ 0.93
SMC6-206ENST00000446852 KRT32Q14532 448 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms