RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 UFL1O94874 794 aa23.77■■□□□ 1.4
HDAC4-203ENST00000445704 NBPF7P0C2Y1 421 aaPredicted RBP23.77■■□□□ 1.4
HDAC4-203ENST00000445704 CXCL9Q07325 125 aa23.77■■□□□ 1.4
HDAC4-203ENST00000445704 SMC1BQ8NDV3 1235 aa23.77■■□□□ 1.4
HDAC4-203ENST00000445704 MINPP1Q9UNW1 487 aa23.77■■□□□ 1.4
HDAC4-203ENST00000445704 LMBR1LQ6UX01 489 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 KAZALD1Q96I82 304 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 SUCLG2Q96I99 432 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 DBNDD1Q9H9R9 158 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 HACL1Q9UJ83 578 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 GGA1Q9UJY5 639 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 NOB1Q9ULX3 412 aaKnown RBP23.76■■□□□ 1.39
HDAC4-203ENST00000445704 UTYO14607 1347 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 XDHP47989 1333 aa23.76■■□□□ 1.39
HDAC4-203ENST00000445704 WTIPA6NIX2 430 aaPredicted RBP23.75■■□□□ 1.39
HDAC4-203ENST00000445704 IGHMBP2P38935 993 aaKnown RBP23.75■■□□□ 1.39
HDAC4-203ENST00000445704 SCNN1DP51172 638 aa23.75■■□□□ 1.39
HDAC4-203ENST00000445704 BRPF1P55201 1214 aaPredicted RBP23.75■■□□□ 1.39
HDAC4-203ENST00000445704 EYA3Q99504 573 aa23.75■■□□□ 1.39
HDAC4-203ENST00000445704 ANKRD18BA2A2Z9 1011 aa23.74■■□□□ 1.39
HDAC4-203ENST00000445704 RAD17O75943 681 aa23.74■■□□□ 1.39
HDAC4-203ENST00000445704 CHMP3Q9Y3E7 222 aa23.74■■□□□ 1.39
HDAC4-203ENST00000445704 ADAMTSL1Q8N6G6 1762 aa23.73■■□□□ 1.39
HDAC4-203ENST00000445704 EPHX2P34913 555 aa23.73■■□□□ 1.39
HDAC4-203ENST00000445704 DOK7Q18PE1 504 aa23.73■■□□□ 1.39
HDAC4-203ENST00000445704 CIAPIN1Q6FI81 312 aa23.73■■□□□ 1.39
HDAC4-203ENST00000445704 ECE2O60344 883 aa23.72■■□□□ 1.39
HDAC4-203ENST00000445704 ATP2B4P23634 1241 aa23.72■■□□□ 1.39
HDAC4-203ENST00000445704 IFIT5Q13325 482 aaKnown RBP23.72■■□□□ 1.39
HDAC4-203ENST00000445704 ZC3H12CQ9C0D7 883 aaKnown RBP23.72■■□□□ 1.39
HDAC4-203ENST00000445704 ZBED9Q6R2W3 1325 aa23.72■■□□□ 1.39
HDAC4-203ENST00000445704 EPS15P42566 896 aa23.71■■□□□ 1.39
HDAC4-203ENST00000445704 MPHOSPH8Q99549 860 aa23.71■■□□□ 1.39
HDAC4-203ENST00000445704 USP44Q9H0E7 712 aa23.71■■□□□ 1.39
HDAC4-203ENST00000445704 GMPSP49915 693 aaPredicted RBP23.7■■□□□ 1.38
HDAC4-203ENST00000445704 EAPPQ56P03 285 aaPredicted RBP23.7■■□□□ 1.38
HDAC4-203ENST00000445704 CHADLQ6NUI6 762 aa23.7■■□□□ 1.38
HDAC4-203ENST00000445704 KCNQ5Q9NR82 932 aa23.7■■□□□ 1.38
HDAC4-203ENST00000445704 A0A1B0GUL6 1792 aa23.7■■□□□ 1.38
HDAC4-203ENST00000445704 SCN9AQ15858 1988 aa23.69■■□□□ 1.38
HDAC4-203ENST00000445704 LMOD1P29536 600 aaPredicted RBP23.69■■□□□ 1.38
HDAC4-203ENST00000445704 CCT4P50991 539 aaKnown RBP23.69■■□□□ 1.38
HDAC4-203ENST00000445704 LDHDQ86WU2 507 aa23.69■■□□□ 1.38
HDAC4-203ENST00000445704 ANKRD44Q8N8A2 993 aa23.69■■□□□ 1.38
HDAC4-203ENST00000445704 ZNF594Q96JF6 807 aaPredicted RBP23.69■■□□□ 1.38
HDAC4-203ENST00000445704 API5Q9BZZ5 524 aaKnown RBP23.69■■□□□ 1.38
HDAC4-203ENST00000445704 BICC1Q9H694 974 aaKnown RBP23.69■■□□□ 1.38
HDAC4-203ENST00000445704 KIF16BQ96L93 1317 aa23.68■■□□□ 1.38
HDAC4-203ENST00000445704 BCAR3O75815 825 aa23.68■■□□□ 1.38
HDAC4-203ENST00000445704 CHRNDQ07001 517 aa23.68■■□□□ 1.38
HDAC4-203ENST00000445704 TNIP1Q15025 636 aa23.68■■□□□ 1.38
HDAC4-203ENST00000445704 CCDC57Q2TAC2 916 aa23.68■■□□□ 1.38
HDAC4-203ENST00000445704 GPRC5DQ9NZD1 345 aa23.68■■□□□ 1.38
HDAC4-203ENST00000445704 MED23Q9ULK4 1368 aa23.67■■□□□ 1.38
HDAC4-203ENST00000445704 PSMD14O00487 310 aa23.67■■□□□ 1.38
HDAC4-203ENST00000445704 APLP1P51693 650 aa23.67■■□□□ 1.38
HDAC4-203ENST00000445704 RABL6Q3YEC7 729 aaPredicted RBP23.67■■□□□ 1.38
HDAC4-203ENST00000445704 ZBTB12Q9Y330 459 aaPredicted RBP23.67■■□□□ 1.38
HDAC4-203ENST00000445704 HTRA3P83110 453 aa23.66■■□□□ 1.38
HDAC4-203ENST00000445704 PNMA8AQ86V59 439 aaPredicted RBP23.66■■□□□ 1.38
HDAC4-203ENST00000445704 ANKRD2Q9GZV1 360 aa23.66■■□□□ 1.38
HDAC4-203ENST00000445704 TNNQ9UQP3 1299 aa23.66■■□□□ 1.38
HDAC4-203ENST00000445704 SHTN1A0MZ66 631 aa23.65■■□□□ 1.38
HDAC4-203ENST00000445704 KLRK1P26718 216 aa23.65■■□□□ 1.38
HDAC4-203ENST00000445704 TXNRD3Q86VQ6 643 aa23.65■■□□□ 1.38
HDAC4-203ENST00000445704 HELBQ8NG08 1087 aaPredicted RBP23.65■■□□□ 1.38
HDAC4-203ENST00000445704 ARHGAP45Q92619 1136 aa23.65■■□□□ 1.38
HDAC4-203ENST00000445704 LEMD3Q9Y2U8 911 aa23.65■■□□□ 1.38
HDAC4-203ENST00000445704 ZNF804BA4D1E1 1349 aa23.64■■□□□ 1.38
HDAC4-203ENST00000445704 G3V3G9 751 aa23.64■■□□□ 1.37
HDAC4-203ENST00000445704 SNAP23O00161 211 aa23.64■■□□□ 1.37
HDAC4-203ENST00000445704 TAF7LQ5H9L4 462 aa23.64■■□□□ 1.37
HDAC4-203ENST00000445704 DCAF8Q5TAQ9 597 aa23.64■■□□□ 1.37
HDAC4-203ENST00000445704 CLEC11AQ9Y240 323 aa23.64■■□□□ 1.37
HDAC4-203ENST00000445704 TAF5LO75529 589 aa23.63■■□□□ 1.37
HDAC4-203ENST00000445704 LDHAL6AQ6ZMR3 332 aa23.63■■□□□ 1.37
HDAC4-203ENST00000445704 ADARB2Q9NS39 739 aaKnown RBP23.63■■□□□ 1.37
HDAC4-203ENST00000445704 PSME4Q14997 1843 aa23.63■■□□□ 1.37
HDAC4-203ENST00000445704 MAP1SQ66K74 1059 aaPredicted RBP23.62■■□□□ 1.37
HDAC4-203ENST00000445704 USP50Q70EL3 339 aaPredicted RBP23.62■■□□□ 1.37
HDAC4-203ENST00000445704 FRAT1Q92837 279 aaPredicted RBP23.62■■□□□ 1.37
HDAC4-203ENST00000445704 PUS3Q9BZE2 481 aaKnown RBP23.62■■□□□ 1.37
HDAC4-203ENST00000445704 IRS2Q9Y4H2 1338 aa23.61■■□□□ 1.37
HDAC4-203ENST00000445704 VIL1P09327 827 aaKnown RBP23.61■■□□□ 1.37
HDAC4-203ENST00000445704 TRIM27P14373 513 aa23.61■■□□□ 1.37
HDAC4-203ENST00000445704 MICALL2Q8IY33 904 aa23.61■■□□□ 1.37
HDAC4-203ENST00000445704 CNNM1Q9NRU3 951 aa23.61■■□□□ 1.37
HDAC4-203ENST00000445704 CNOT7Q9UIV1 285 aaKnown RBP23.61■■□□□ 1.37
HDAC4-203ENST00000445704 ZNF646O15015 1829 aaPredicted RBP23.61■■□□□ 1.37
HDAC4-203ENST00000445704 ITGBL1O95965 494 aaPredicted RBP23.6■■□□□ 1.37
HDAC4-203ENST00000445704 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
HDAC4-203ENST00000445704 TRPM4Q8TD43 1214 aa23.6■■□□□ 1.37
HDAC4-203ENST00000445704 DPF2Q92785 391 aa23.6■■□□□ 1.37
HDAC4-203ENST00000445704 PASKQ96RG2 1323 aa23.59■■□□□ 1.37
HDAC4-203ENST00000445704 UBTFL1P0CB47 393 aaPredicted RBP23.59■■□□□ 1.37
HDAC4-203ENST00000445704 KCNJ4P48050 445 aa23.59■■□□□ 1.37
HDAC4-203ENST00000445704 ATF7IPQ6VMQ6 1270 aa23.59■■□□□ 1.37
HDAC4-203ENST00000445704 PODNQ7Z5L7 613 aa23.59■■□□□ 1.37
HDAC4-203ENST00000445704 MEIS3Q99687 375 aa23.59■■□□□ 1.37
HDAC4-203ENST00000445704 IPO8O15397 1037 aaKnown RBP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms