RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 F13A1P00488 732 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 IL2RBP14784 551 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 MCM5P33992 734 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 KARSQ15046 597 aaKnown RBP9.22□□□□□ -0.93
RIF1-205ENST00000444746 A2MP01023 1474 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 MAGEB6P1A0A0J9YX57 407 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 PRAMEF22A3QJZ6 481 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 CDR1P51861 262 aa9.22□□□□□ -0.93
RIF1-205ENST00000444746 HMGB1P09429 215 aaKnown RBP9.21□□□□□ -0.93
RIF1-205ENST00000444746 GJC1P36383 396 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 UGGT2Q9NYU1 1516 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 MBD4O95243 580 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 LUZP1Q86V48 1076 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 FNBP4Q8N3X1 1017 aaPredicted RBP9.21□□□□□ -0.93
RIF1-205ENST00000444746 CUL5Q93034 780 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 CALM1P0DP23 149 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 CALM2P0DP24 149 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 CALM3P0DP25 149 aa9.21□□□□□ -0.93
RIF1-205ENST00000444746 LMOD1P29536 600 aaPredicted RBP9.21□□□□□ -0.93
RIF1-205ENST00000444746 UHRF1BP1Q6BDS2 1440 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 SYKP43405 635 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 ZNF174Q15697 407 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 FKBP15Q5T1M5 1219 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 MCM9Q9NXL9 1143 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 MAPK8IP1Q9UQF2 711 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 PTPDC1A2A3K4 754 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 HMGN5P82970 282 aaKnown RBP9.21□□□□□ -0.94
RIF1-205ENST00000444746 RTN1Q16799 776 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 TSG101Q99816 390 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 GNPATO15228 680 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
RIF1-205ENST00000444746 SEC62Q99442 399 aaKnown RBP9.21□□□□□ -0.94
RIF1-205ENST00000444746 USP26Q9BXU7 913 aa9.21□□□□□ -0.94
RIF1-205ENST00000444746 RNF41Q9H4P4 317 aaPredicted RBP9.21□□□□□ -0.94
RIF1-205ENST00000444746 ZHX1Q9UKY1 873 aaPredicted RBP9.21□□□□□ -0.94
RIF1-205ENST00000444746 TMEM110-MUSTN1A8MSY1 372 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 IL16Q14005 1332 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 A0A1B0GVL5 298 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 SORBS3O60504 671 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 STX1AQ16623 288 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 FAM98CQ17RN3 349 aaKnown RBP9.2□□□□□ -0.94
RIF1-205ENST00000444746 PPP4R3BQ5MIZ7 849 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 DPH6Q7L8W6 267 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 CRNKL1Q9BZJ0 848 aaKnown RBP9.2□□□□□ -0.94
RIF1-205ENST00000444746 DCTPP1Q9H773 170 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 TRIM47Q96LD4 638 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 PSMD1Q99460 953 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 RALGAPBQ86X10 1494 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 GADD45BO75293 160 aaPredicted RBP9.2□□□□□ -0.94
RIF1-205ENST00000444746 TTF1Q15361 905 aaPredicted RBP9.2□□□□□ -0.94
RIF1-205ENST00000444746 SEPT7Q16181 437 aaKnown RBP9.2□□□□□ -0.94
RIF1-205ENST00000444746 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 CADPS2Q86UW7 1296 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 NPATQ14207 1427 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 MAP3K5Q99683 1374 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 ATP2C2O75185 946 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 NOP2P46087 812 aaKnown RBP9.2□□□□□ -0.94
RIF1-205ENST00000444746 CCDC196A0A1B0GTZ2 297 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 ST5P78524 1137 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 PDE4BQ07343 736 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 LONRF3Q496Y0 759 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 LAMC3Q9Y6N6 1575 aa9.2□□□□□ -0.94
RIF1-205ENST00000444746 UBA7P41226 1012 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 ZNF397Q8NF99 534 aaPredicted RBP9.19□□□□□ -0.94
RIF1-205ENST00000444746 CCDC148Q8NFR7 591 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 UHRF1BP1LA0JNW5 1464 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 ITGA6P23229 1130 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 TNNI2P48788 182 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 TMEM266Q2M3C6 531 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 CABP5Q9NP86 173 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 GPCPD1Q9NPB8 672 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 NAPAP54920 295 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 UBE2HP62256 183 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 NLRP3Q96P20 1036 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 GOLGA6L10A6NI86 522 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 MSL1Q68DK7 614 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 SYCP3Q8IZU3 236 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 CCDC12Q8WUD4 166 aaPredicted RBP9.19□□□□□ -0.94
RIF1-205ENST00000444746 STAMQ92783 540 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 DDX19AQ9NUU7 478 aaKnown RBP9.19□□□□□ -0.94
RIF1-205ENST00000444746 ABCC1P33527 1531 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 KIF5CO60282 957 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 GNG11P61952 73 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 FAM212AQ96EL1 285 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 CAPZA3Q96KX2 299 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 A0A1B0GUL7 405 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 N4BP3O15049 544 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 CCDC102BQ68D86 513 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 DNAJC10Q8IXB1 793 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 FAM107BQ9H098 131 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 NSD2O96028 1365 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 ZMYM3Q14202 1370 aa9.19□□□□□ -0.94
RIF1-205ENST00000444746 NEBLO76041 1014 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 UBASH3AP57075 661 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 TMCO3Q6UWJ1 677 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 ARHGAP45Q92619 1136 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 SNX14Q9Y5W7 946 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 UQCRFS1P1P0C7P4 283 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 CALML4Q96GE6 196 aa9.18□□□□□ -0.94
RIF1-205ENST00000444746 CUL7Q14999 1698 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms