RNA–Protein interactions for RNA: ENST00000444048.1

TRIM60P16-201, Transcript of tripartite motif containing 60 pseudogene 16, humanhuman

BASIC

Gene TRIM60P16, Length 694 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60P16-201ENST00000444048 HSP90AB1P08238 724 aaKnown RBP8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 IL13P35225 146 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 TNNT2P45379 298 aaPredicted RBP8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 EIF4A2Q14240 407 aaKnown RBP8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 NBPF6Q5VWK0 638 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 ZCRB1Q8TBF4 217 aaKnown RBP8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 ITPKCQ96DU7 683 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 SLC10A4Q96EP9 437 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 NBPF4Q96M43 638 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 PRKRIP1Q9H875 184 aaPredicted RBP8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 ZFAND3Q9H8U3 227 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 USP35Q9P2H5 1018 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 SPG7Q9UQ90 795 aa8.15□□□□□ -1.1
TRIM60P16-201ENST00000444048 EP400Q96L91 3159 aa8.15□□□□□ -1.11
TRIM60P16-201ENST00000444048 ANP32CO43423 234 aa8.14□□□□□ -1.11
TRIM60P16-201ENST00000444048 NEFMP07197 916 aa8.14□□□□□ -1.11
TRIM60P16-201ENST00000444048 FBLN1P23142 703 aa8.14□□□□□ -1.11
TRIM60P16-201ENST00000444048 ZNF775Q96BV0 537 aaPredicted RBP8.14□□□□□ -1.11
TRIM60P16-201ENST00000444048 KCTD15Q96SI1 283 aaPredicted RBP8.14□□□□□ -1.11
TRIM60P16-201ENST00000444048 RGPD5Q99666 1765 aa8.14□□□□□ -1.11
TRIM60P16-201ENST00000444048 TNS2Q63HR2 1409 aa8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 PCDH11XQ9BZA7 1347 aa8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 PCDH11YQ9BZA8 1340 aa8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 SNRPBP14678 240 aaKnown RBP8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 SF3B2Q13435 895 aaKnown RBP8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 PLEKHO1Q53GL0 409 aaPredicted RBP8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 LTV1Q96GA3 475 aaPredicted RBP8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 KAT6BQ8WYB5 2073 aa8.13□□□□□ -1.11
TRIM60P16-201ENST00000444048 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
TRIM60P16-201ENST00000444048 GPR37L1O60883 481 aa8.12□□□□□ -1.11
TRIM60P16-201ENST00000444048 CCDC116Q8IYX3 515 aa8.12□□□□□ -1.11
TRIM60P16-201ENST00000444048 TRIM47Q96LD4 638 aa8.12□□□□□ -1.11
TRIM60P16-201ENST00000444048 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
TRIM60P16-201ENST00000444048 CDV3Q9UKY7 258 aaKnown RBP8.12□□□□□ -1.11
TRIM60P16-201ENST00000444048 ZBBXA8MT70 800 aa8.11□□□□□ -1.11
TRIM60P16-201ENST00000444048 FBXO45P0C2W1 286 aa8.11□□□□□ -1.11
TRIM60P16-201ENST00000444048 DZIP3Q86Y13 1208 aaKnown RBP8.11□□□□□ -1.11
TRIM60P16-201ENST00000444048 IFNL2Q8IZJ0 200 aa8.11□□□□□ -1.11
TRIM60P16-201ENST00000444048 ZFP42Q96MM3 310 aa8.11□□□□□ -1.11
TRIM60P16-201ENST00000444048 NDUFB9Q9Y6M9 179 aa8.11□□□□□ -1.11
TRIM60P16-201ENST00000444048 ERVV-2B6SEH9 535 aa8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 PLSCR1O15162 318 aa8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 HTATSF1O43719 755 aaKnown RBP8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 INTS6LQ5JSJ4 861 aaKnown RBP8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 PPP1R26Q5T8A7 1209 aaPredicted RBP8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 SULT6B1Q6IMI4 303 aa8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 MRPL14Q6P1L8 145 aaKnown RBP8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 GAS2L2Q8NHY3 880 aa8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 DCAF5Q96JK2 942 aa8.1□□□□□ -1.11
TRIM60P16-201ENST00000444048 COL3A1P02461 1466 aaPredicted RBP8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 BAG6P46379 1132 aa8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 C1orf141Q5JVX7 400 aa8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 NGEFQ8N5V2 710 aa8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 MARCH10Q8NA82 808 aaPredicted RBP8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 KIFC2Q96AC6 838 aa8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 PURBQ96QR8 312 aaKnown RBP8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 RGPD1P0DJD0 1748 aa8.09□□□□□ -1.11
TRIM60P16-201ENST00000444048 WNK3Q9BYP7 1800 aa8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 U2SURPO15042 1029 aaKnown RBP8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 U2AF1L5P0DN76 240 aaPredicted RBP8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 RAB15P59190 212 aa8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 U2AF1Q01081 240 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 AKAP4Q5JQC9 854 aa8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 TBC1D2BQ9UPU7 963 aa8.08□□□□□ -1.12
TRIM60P16-201ENST00000444048 LRRC37A3O60309 1634 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 APBB1O00213 710 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 PHKG2P15735 406 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 NR1H3Q13133 447 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 CBLBQ13191 982 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 WDR43Q15061 677 aaKnown RBP eCLIP8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 NBPF20Q3BBV1 942 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 MEIOBQ8N635 442 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 TMPRSS4Q9NRS4 437 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 PCDHB9Q9Y5E1 797 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 BRWD3Q6RI45 1802 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 MEGF6O75095 1541 aa8.07□□□□□ -1.12
TRIM60P16-201ENST00000444048 PKD1L3Q7Z443 1732 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 ESPNB1AK53 854 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 CYP27B1O15528 508 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 DHX9Q08211 1270 aaKnown RBP8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 SCARF1Q14162 830 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 SLC27A3Q5K4L6 730 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 C6orf118Q5T5N4 469 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 PGPEP1Q9NXJ5 209 aa8.06□□□□□ -1.12
TRIM60P16-201ENST00000444048 GNAT3A8MTJ3 354 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 CCER2I3L3R5 266 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 ERVH48-1M5A8F1 160 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 GIGYF1O75420 1035 aaPredicted RBP8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 LMOD3Q0VAK6 560 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 USHBP1Q8N6Y0 703 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 BABAM1Q9NWV8 329 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 RGPD3A6NKT7 1758 aaPredicted RBP8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 RGPD2P0DJD1 1756 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 RGPD4Q7Z3J3 1758 aa8.05□□□□□ -1.12
TRIM60P16-201ENST00000444048 MAPK8IP3Q9UPT6 1336 aa8.04□□□□□ -1.12
TRIM60P16-201ENST00000444048 TRIM37O94972 964 aa8.04□□□□□ -1.12
TRIM60P16-201ENST00000444048 APBA3O96018 575 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms