RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 FNDC3AQ9Y2H6 1198 aaKnown RBP7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
TM9SF3-202ENST00000443638 U2SURPO15042 1029 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 ARSDP51689 593 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 ARSHQ5FYA8 562 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 FBXL19Q6PCT2 694 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 Q6ZVU0 165 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 RHPN1Q8TCX5 695 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 ZSCAN10Q96SZ4 725 aaPredicted RBP7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 CCDC113Q9H0I3 377 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 TYW1Q9NV66 732 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 ZDHHC3Q9NYG2 299 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 PPM1HQ9ULR3 514 aa7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 TTF2Q9UNY4 1162 aaKnown RBP7.35□□□□□ -1.23
TM9SF3-202ENST00000443638 MINDY4BA8MYZ0 360 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 UBAP1LF5GYI3 381 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 EREGO14944 169 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 PPP1R12AO14974 1030 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 GADD45BO75293 160 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 GRNP28799 593 aaKnown RBP7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 CCDC85BQ15834 202 aaPredicted RBP7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 PRPF40BQ6NWY9 871 aaKnown RBP7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 PHC3Q8NDX5 983 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 TRPM4Q8TD43 1214 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 SHDQ96IW2 340 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 USP20Q9Y2K6 914 aa7.34□□□□□ -1.23
TM9SF3-202ENST00000443638 F6X3S4 739 aa7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 RLBP1P12271 317 aa7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 GBP2P32456 591 aaPredicted RBP7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 NBPF10Q6P3W6 841 aaKnown RBP7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 CELF2-AS1Q8N7Q2 184 aa7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 APPBP2Q92624 585 aa7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 TMEM260Q9NX78 707 aa7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 CNTN3Q9P232 1028 aa7.33□□□□□ -1.24
TM9SF3-202ENST00000443638 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 VIL1P09327 827 aaKnown RBP7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 GYS2P54840 703 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 CHMP4BP1P59074 171 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 C4orf17Q53FE4 359 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 HSP90AB2PQ58FF8 381 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 SV2BQ7L1I2 683 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 C1orf127Q8N9H9 656 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 HSH2DQ96JZ2 352 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 NLRP3Q96P20 1036 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 DNAJC7Q99615 494 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 GRIP2Q9C0E4 1043 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 SLKQ9H2G2 1235 aaPredicted RBP7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 TRAK1Q9UPV9 953 aa7.32□□□□□ -1.24
TM9SF3-202ENST00000443638 CCDC194A0A1B0GVG4 234 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 MEN1O00255 615 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 SMAD7O15105 426 aaKnown RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 TPD52L2O43399 206 aaKnown RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 MAP4K4O95819 1239 aaPredicted RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 GGCXP38435 758 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 PLA2G4AP47712 749 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 SQSTM1Q13501 440 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 GRIN2CQ14957 1233 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 TNNI3KQ59H18 835 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 TMEM214Q6NUQ4 689 aaKnown RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 BTLAQ7Z6A9 289 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 HOMER1Q86YM7 354 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 SLITRK4Q8IW52 837 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 FAM169BQ8N8A8 192 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 EMID1Q96A84 441 aaPredicted RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 ANAPC16Q96DE5 110 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 SRRTQ9BXP5 876 aaKnown RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 UBP1Q9NZI7 540 aa7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 SUPT16HQ9Y5B9 1047 aaKnown RBP7.31□□□□□ -1.24
TM9SF3-202ENST00000443638 A0A1W2PP55 124 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 EGFRP00533 1210 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 PDGFRBP09619 1106 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 CRKP46108 304 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 MASP1P48740 699 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 DDR2Q16832 855 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 PEAR1Q5VY43 1037 aaPredicted RBP7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 JMYQ8N9B5 988 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 AGBL1Q96MI9 1066 aa7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 KLF16Q9BXK1 252 aaPredicted RBP7.3□□□□□ -1.24
TM9SF3-202ENST00000443638 WNT7AO00755 349 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 CD2BP2O95400 341 aaKnown RBP7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 PF4P02776 101 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 S100BP04271 92 aaPredicted RBP7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 GPC1P35052 558 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 LIG3P49916 1009 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 LMNB2Q03252 620 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 RASGRF1Q13972 1273 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 NBPF1Q3BBV0 1214 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 GNASQ5JWF2 1037 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 C16orf86Q6ZW13 317 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 CMTR1Q8N1G2 835 aaKnown RBP7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 CPLX3Q8WVH0 158 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 FEZ1Q99689 392 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 ABCB6Q9NP58 842 aa7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 ABI2Q9NYB9 513 aaPredicted RBP7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 MAGEC2Q9UBF1 373 aaPredicted RBP7.29□□□□□ -1.24
TM9SF3-202ENST00000443638 ATP4AP20648 1035 aa7.28□□□□□ -1.24
TM9SF3-202ENST00000443638 GIPRP48546 466 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms