RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 EYA3Q99504 573 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 CREBZFQ9NS37 354 aa11.16□□□□□ -0.62
USP6NL-203ENST00000443016 TAF1P21675 1872 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 NEURL1BA8MQ27 555 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 GPSM2P81274 684 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 UBE3BQ7Z3V4 1068 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 ANKRD18AQ8IVF6 992 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 ZC3H12CQ9C0D7 883 aaKnown RBP11.15□□□□□ -0.62
USP6NL-203ENST00000443016 DDX60Q8IY21 1712 aaKnown RBP11.15□□□□□ -0.62
USP6NL-203ENST00000443016 DNAAF4Q8WXU2 420 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 YTHDC1Q96MU7 727 aaKnown RBP11.15□□□□□ -0.62
USP6NL-203ENST00000443016 CDC5LQ99459 802 aaKnown RBP11.15□□□□□ -0.62
USP6NL-203ENST00000443016 DBNDD1Q9H9R9 158 aa11.15□□□□□ -0.62
USP6NL-203ENST00000443016 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
USP6NL-203ENST00000443016 CDHR2Q9BYE9 1310 aa11.14□□□□□ -0.63
USP6NL-203ENST00000443016 GMPSP49915 693 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-203ENST00000443016 CTSWP56202 376 aa11.14□□□□□ -0.63
USP6NL-203ENST00000443016 GPRC5DQ9NZD1 345 aa11.14□□□□□ -0.63
USP6NL-203ENST00000443016 POLLQ9UGP5 575 aa11.14□□□□□ -0.63
USP6NL-203ENST00000443016 MKRN1Q9UHC7 482 aaKnown RBP11.14□□□□□ -0.63
USP6NL-203ENST00000443016 UFL1O94874 794 aa11.14□□□□□ -0.63
USP6NL-203ENST00000443016 USP50Q70EL3 339 aaPredicted RBP11.14□□□□□ -0.63
USP6NL-203ENST00000443016 TBC1D16Q8TBP0 767 aa11.14□□□□□ -0.63
USP6NL-203ENST00000443016 ADARB2Q9NS39 739 aaKnown RBP11.14□□□□□ -0.63
USP6NL-203ENST00000443016 TMEM88BA6NKF7 163 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 ITGBL1O95965 494 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-203ENST00000443016 GCKRQ14397 625 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 DOK7Q18PE1 504 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 JMYQ8N9B5 988 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 GGA1Q9UJY5 639 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 PASKQ96RG2 1323 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 HNRNPUQ00839 825 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP6NL-203ENST00000443016 LINS1Q8NG48 757 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 TTLL11Q8NHH1 800 aa11.13□□□□□ -0.63
USP6NL-203ENST00000443016 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
USP6NL-203ENST00000443016 YDJCA8MPS7 323 aa11.12□□□□□ -0.63
USP6NL-203ENST00000443016 H7C1D1 291 aa11.12□□□□□ -0.63
USP6NL-203ENST00000443016 GREM2Q9H772 168 aa11.12□□□□□ -0.63
USP6NL-203ENST00000443016 H7C1W4 665 aa11.12□□□□□ -0.63
USP6NL-203ENST00000443016 ECE2O60344 883 aa11.12□□□□□ -0.63
USP6NL-203ENST00000443016 CNOT7Q9UIV1 285 aaKnown RBP11.12□□□□□ -0.63
USP6NL-203ENST00000443016 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
USP6NL-203ENST00000443016 XDHP47989 1333 aa11.11□□□□□ -0.63
USP6NL-203ENST00000443016 F6X3S4 739 aa11.11□□□□□ -0.63
USP6NL-203ENST00000443016 IGHMBP2P38935 993 aaKnown RBP11.11□□□□□ -0.63
USP6NL-203ENST00000443016 ABT1Q9ULW3 272 aaKnown RBP11.11□□□□□ -0.63
USP6NL-203ENST00000443016 PSMD14O00487 310 aa11.11□□□□□ -0.63
USP6NL-203ENST00000443016 MPHOSPH8Q99549 860 aa11.11□□□□□ -0.63
USP6NL-203ENST00000443016 DUOX1Q9NRD9 1551 aa11.11□□□□□ -0.63
USP6NL-203ENST00000443016 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
USP6NL-203ENST00000443016 SLC4A10Q6U841 1118 aa11.1□□□□□ -0.63
USP6NL-203ENST00000443016 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
USP6NL-203ENST00000443016 BSDC1Q9NW68 430 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-203ENST00000443016 CHMP3Q9Y3E7 222 aa11.1□□□□□ -0.63
USP6NL-203ENST00000443016 COL4A1P02462 1669 aa11.1□□□□□ -0.63
USP6NL-203ENST00000443016 MAPK8IP2Q13387 824 aaPredicted RBP11.1□□□□□ -0.63
USP6NL-203ENST00000443016 LTBP1Q14766 1721 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 ITGA6P23229 1130 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 ATP2B4P23634 1241 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 FAM161AQ3B820 660 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 DPF2Q92785 391 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 TRAF5O00463 557 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 ECM2O94769 699 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-203ENST00000443016 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
USP6NL-203ENST00000443016 C9orf78Q9NZ63 289 aaPredicted RBP11.09□□□□□ -0.63
USP6NL-203ENST00000443016 MINPP1Q9UNW1 487 aa11.09□□□□□ -0.63
USP6NL-203ENST00000443016 E9PSI1 815 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 RPS12P25398 132 aaKnown RBP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 DEFB115Q30KQ5 88 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 SAMD1Q6SPF0 538 aaPredicted RBP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 SAMD7Q7Z3H4 446 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 PLA2G12BQ9BX93 195 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 CNTNAP1P78357 1384 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 SHTN1A0MZ66 631 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 HSPA1AP0DMV8 641 aaKnown RBP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 HSPA1BP0DMV9 641 aaKnown RBP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 FMR1Q06787 632 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 TBC1D10BQ4KMP7 808 aaPredicted RBP11.08□□□□□ -0.64
USP6NL-203ENST00000443016 TRPM4Q8TD43 1214 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
USP6NL-203ENST00000443016 ZNF521Q96K83 1311 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 RTL9Q8NET4 1388 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 CACNA1FO60840 1977 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 ANKRD18BA2A2Z9 1011 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 KCNJ4P48050 445 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 CCT4P50991 539 aaKnown RBP11.07□□□□□ -0.64
USP6NL-203ENST00000443016 GRM1Q13255 1194 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 IFIT5Q13325 482 aaKnown RBP11.07□□□□□ -0.64
USP6NL-203ENST00000443016 GLIS2Q9BZE0 524 aaPredicted RBP11.07□□□□□ -0.64
USP6NL-203ENST00000443016 SRCIN1Q9C0H9 1055 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 ZNF408Q9H9D4 720 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 GRM8O00222 908 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 VEGFBP49765 207 aa11.07□□□□□ -0.64
USP6NL-203ENST00000443016 HIRAP54198 1017 aaPredicted RBP11.07□□□□□ -0.64
USP6NL-203ENST00000443016 CASP7P55210 303 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms