RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 FAM43AQ8N2R8 423 aa7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 MSL3Q8N5Y2 521 aaKnown RBP7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 STAG1Q8WVM7 1258 aa7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 DEPDC7Q96QD5 511 aa7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 FANCLQ9NW38 375 aa7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 BSDC1Q9NW68 430 aaPredicted RBP7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 LAMC3Q9Y6N6 1575 aa7.28□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 ERBB3P21860 1342 aa7.27□□□□□ -1.24
ALMS1-IT1-201ENST00000441587 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ETFBP38117 255 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 AMPD3Q01432 767 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RAB33AQ14088 237 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 OTUD6BQ8N6M0 293 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NUDT16Q96DE0 195 aaKnown RBP7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 R3HCC1Q9Y3T6 440 aaKnown RBP7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NESP48681 1621 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CCDC85CA6NKD9 419 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SMTNP53814 917 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 DGKZQ13574 1117 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ESCO1Q5FWF5 840 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 INTS6LQ5JSJ4 861 aaKnown RBP7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 KIAA0825Q8IV33 1275 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 KBTBD4Q9NVX7 518 aa7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 FEZ2Q9UHY8 353 aaPredicted RBP7.27□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ABCA10Q8WWZ4 1543 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SNPHO15079 494 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 USP17L7P0C7H9 530 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 POTEIP0CG38 1075 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PI16Q6UXB8 463 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 GPR152Q8TDT2 470 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SH3TC2Q8TF17 1288 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 APPBP2Q92624 585 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 IFT43Q96FT9 208 aa7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 POLA1P09884 1462 aaPredicted RBP7.26□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RPLP1P05386 114 aaKnown RBP7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PDGFRBP09619 1106 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 MTFR1Q15390 333 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 FMNL3Q8IVF7 1028 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ANKK1Q8NFD2 765 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 JDP2Q8WYK2 163 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TSR3Q9UJK0 312 aaKnown RBP7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 EFR3BQ9Y2G0 817 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CFAP69A5D8W1 941 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 KLF4O43474 513 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PBX2P40425 430 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TBX4P57082 545 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 COPS2P61201 443 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 HSP90AA2PQ14568 343 aaPredicted RBP7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RASA3Q14644 834 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ARSHQ5FYA8 562 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 VASH1Q7L8A9 365 aaPredicted RBP7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 LRP10Q7Z4F1 713 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 EPS8L3Q8TE67 593 aaKnown RBP7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CCDC74AQ96AQ1 378 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SRCIN1Q9C0H9 1055 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 GGNBP2Q9H3C7 697 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NRBP1Q9UHY1 535 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PRR12Q9ULL5 1215 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 STRIP2Q9ULQ0 834 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RAD54L2Q9Y4B4 1467 aa7.25□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 FAM221BA6H8Z2 402 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 A6NHS1 94 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 GNRH1P01148 92 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RTN1Q16799 776 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 DDX46Q7L014 1031 aaKnown RBP7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ALDH16A1Q8IZ83 802 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PDILTQ8N807 584 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PRPF38AQ8NAV1 312 aaKnown RBP7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SERTM1A2A2V5 107 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SOWAHBA6NEL2 793 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ZPR1O75312 459 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NOS2P35228 1153 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NBPF9Q3BBW0 867 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ICE2Q659A1 982 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 HNRNPLLQ8WVV9 542 aaKnown RBP7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TYW1Q9NV66 732 aaKnown RBP7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 KLK14Q9P0G3 267 aa7.24□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CUL7Q14999 1698 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PDS5BQ9NTI5 1447 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ADH1BP00325 375 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 SCP2P22307 547 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 IRS1P35568 1242 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 POU5F1Q01860 360 aaKnown RBP7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CYP2U1Q7Z449 544 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 CPLX3Q8WVH0 158 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ZNF232Q9UNY5 417 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 FHAD1B1AJZ9 1412 aa7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 RRBP1Q9P2E9 1410 aaKnown RBP7.23□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 IRX3P78415 501 aaPredicted RBP7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PWP1Q13610 501 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 ODR4Q5SWX8 454 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 POTEAQ6S8J7 498 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 HOMER1Q86YM7 354 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 TREML1Q86YW5 311 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 NAP1L4Q99733 375 aaKnown RBP7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 PAGR1Q9BTK6 254 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 MAP3K20Q9NYL2 800 aaKnown RBP7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 MAP3K1Q13233 1512 aa7.22□□□□□ -1.25
ALMS1-IT1-201ENST00000441587 GOLGA8CPA6NN73 597 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms