RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 KIAA2012Q0VF49 1180 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 TAF7LQ5H9L4 462 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 DPY19L2Q6NUT2 758 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 TMEM57Q8N5G2 664 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 MEIS3Q99687 375 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 GPBP1L1Q9HC44 474 aaPredicted RBP14.82□□□□□ -0.04
HSPG2-206ENST00000439717 POLLQ9UGP5 575 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 GGA1Q9UJY5 639 aa14.82□□□□□ -0.04
HSPG2-206ENST00000439717 DUOX1Q9NRD9 1551 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 LTBP1Q14766 1721 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 C6orf229H3BNL8 230 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 FZD9O00144 591 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 ATP2B4P23634 1241 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 AOC3Q16853 763 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 NIM1KQ8IY84 436 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 ANKRD2Q9GZV1 360 aa14.81□□□□□ -0.04
HSPG2-206ENST00000439717 UFL1O94874 794 aa14.8□□□□□ -0.04
HSPG2-206ENST00000439717 WASHC4Q2M389 1173 aa14.8□□□□□ -0.04
HSPG2-206ENST00000439717 LDHAL6AQ6ZMR3 332 aa14.8□□□□□ -0.04
HSPG2-206ENST00000439717 ZNF526Q8TF50 670 aaPredicted RBP14.8□□□□□ -0.04
HSPG2-206ENST00000439717 LEMD3Q9Y2U8 911 aa14.8□□□□□ -0.04
HSPG2-206ENST00000439717 EIF6P56537 245 aaKnown RBP14.79□□□□□ -0.04
HSPG2-206ENST00000439717 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-206ENST00000439717 ZNF594Q96JF6 807 aaPredicted RBP14.79□□□□□ -0.04
HSPG2-206ENST00000439717 ZC3H12CQ9C0D7 883 aaKnown RBP14.79□□□□□ -0.04
HSPG2-206ENST00000439717 CNNM1Q9NRU3 951 aa14.79□□□□□ -0.04
HSPG2-206ENST00000439717 ZNRF3Q9ULT6 936 aa14.79□□□□□ -0.04
HSPG2-206ENST00000439717 LRRFIP2Q9Y608 721 aaKnown RBP14.79□□□□□ -0.04
HSPG2-206ENST00000439717 SPEF2Q9C093 1822 aa14.78□□□□□ -0.04
HSPG2-206ENST00000439717 COL4A5P29400 1685 aa14.78□□□□□ -0.04
HSPG2-206ENST00000439717 GNAI2P04899 355 aa14.78□□□□□ -0.04
HSPG2-206ENST00000439717 RLBP1P12271 317 aa14.78□□□□□ -0.04
HSPG2-206ENST00000439717 CHRNDQ07001 517 aa14.78□□□□□ -0.04
HSPG2-206ENST00000439717 ITPRIPQ8IWB1 547 aa14.78□□□□□ -0.04
HSPG2-206ENST00000439717 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 ZNF804BA4D1E1 1349 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 ZNF541Q9H0D2 1346 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 RIMBP2O15034 1052 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 ZBTB7BO15156 539 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-206ENST00000439717 DDNO94850 711 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-206ENST00000439717 RFX5P48382 616 aaPredicted RBP14.76□□□□□ -0.05
HSPG2-206ENST00000439717 MTX1Q13505 466 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 PDE3AQ14432 1141 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 GPC2Q8N158 579 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 PANK1Q8TE04 598 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 RIPOR2Q9Y4F9 1068 aa14.76□□□□□ -0.05
HSPG2-206ENST00000439717 MROH5Q6ZUA9 1318 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 G3V3G9 751 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 KCNJ4P48050 445 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 L3MBTL3Q96JM7 780 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-206ENST00000439717 GPR101Q96P66 508 aaPredicted RBP14.75□□□□□ -0.05
HSPG2-206ENST00000439717 RRAGCQ9HB90 399 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 NMRK2Q9NPI5 230 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 WDR90Q96KV7 1748 aa14.75□□□□□ -0.05
HSPG2-206ENST00000439717 KIF3CO14782 793 aa14.74□□□□□ -0.05
HSPG2-206ENST00000439717 PLIN1O60240 522 aa14.74□□□□□ -0.05
HSPG2-206ENST00000439717 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
HSPG2-206ENST00000439717 PTPN12Q05209 780 aaKnown RBP14.74□□□□□ -0.05
HSPG2-206ENST00000439717 MVPQ14764 893 aaKnown RBP14.74□□□□□ -0.05
HSPG2-206ENST00000439717 TNIP1Q15025 636 aa14.74□□□□□ -0.05
HSPG2-206ENST00000439717 C15orf52Q6ZUT6 534 aaKnown RBP14.74□□□□□ -0.05
HSPG2-206ENST00000439717 PUS3Q9BZE2 481 aaKnown RBP14.74□□□□□ -0.05
HSPG2-206ENST00000439717 CHMP4BQ9H444 224 aaKnown RBP14.74□□□□□ -0.05
HSPG2-206ENST00000439717 IQCA1LA6NCM1 817 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 WTIPA6NIX2 430 aaPredicted RBP14.73□□□□□ -0.05
HSPG2-206ENST00000439717 YDJCA8MPS7 323 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 EYA2O00167 538 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 SRGAP3O43295 1099 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 ECE2O60344 883 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 TAF5LO75529 589 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 CIAO1O76071 339 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 CXCL9Q07325 125 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 DOK7Q18PE1 504 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 LRRC24Q50LG9 513 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 CIAPIN1Q6FI81 312 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 PODNQ7Z5L7 613 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 HELBQ8NG08 1087 aaPredicted RBP14.73□□□□□ -0.05
HSPG2-206ENST00000439717 KLHDC4Q8TBB5 520 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 DBNDD1Q9H9R9 158 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 COPRSQ9NQ92 184 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 DDX19BQ9UMR2 479 aa14.73□□□□□ -0.05
HSPG2-206ENST00000439717 POTECB2RU33 542 aa14.72□□□□□ -0.05
HSPG2-206ENST00000439717 UBE4AQ14139 1066 aa14.72□□□□□ -0.05
HSPG2-206ENST00000439717 METTL24Q5JXM2 366 aa14.72□□□□□ -0.05
HSPG2-206ENST00000439717 COA1Q9GZY4 146 aa14.72□□□□□ -0.05
HSPG2-206ENST00000439717 GJA3Q9Y6H8 435 aa14.72□□□□□ -0.05
HSPG2-206ENST00000439717 A0A1B0GUL6 1792 aa14.71□□□□□ -0.05
HSPG2-206ENST00000439717 RAD17O75943 681 aa14.71□□□□□ -0.05
HSPG2-206ENST00000439717 PDE8BO95263 885 aa14.71□□□□□ -0.05
HSPG2-206ENST00000439717 C16orf71Q8IYS4 520 aaPredicted RBP14.71□□□□□ -0.05
HSPG2-206ENST00000439717 COG6Q9Y2V7 657 aa14.71□□□□□ -0.05
HSPG2-206ENST00000439717 IRS2Q9Y4H2 1338 aa14.7□□□□□ -0.06
HSPG2-206ENST00000439717 TOMM70O94826 608 aa14.7□□□□□ -0.06
HSPG2-206ENST00000439717 IL15P40933 162 aaPredicted RBP14.7□□□□□ -0.06
HSPG2-206ENST00000439717 ATP8B2P98198 1209 aa14.7□□□□□ -0.06
HSPG2-206ENST00000439717 ATG9AQ7Z3C6 839 aa14.7□□□□□ -0.06
HSPG2-206ENST00000439717 VGLL2Q8N8G2 317 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms