RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 CCDC85AQ96PX6 553 aaPredicted RBP17.38■□□□□ 0.37
GARNL3-206ENST00000439286 LBX1P52954 281 aa17.37■□□□□ 0.37
GARNL3-206ENST00000439286 TSPYL6Q8N831 410 aa17.37■□□□□ 0.37
GARNL3-206ENST00000439286 TRPM4Q8TD43 1214 aa17.37■□□□□ 0.37
GARNL3-206ENST00000439286 JARID2Q92833 1246 aaPredicted RBP17.37■□□□□ 0.37
GARNL3-206ENST00000439286 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
GARNL3-206ENST00000439286 PODXL2Q9NZ53 605 aa17.37■□□□□ 0.37
GARNL3-206ENST00000439286 ADAMTSL1Q8N6G6 1762 aa17.36■□□□□ 0.37
GARNL3-206ENST00000439286 PI4KAP2A4QPH2 592 aa17.36■□□□□ 0.37
GARNL3-206ENST00000439286 ANP32CO43423 234 aa17.36■□□□□ 0.37
GARNL3-206ENST00000439286 HIRAP54198 1017 aaPredicted RBP17.36■□□□□ 0.37
GARNL3-206ENST00000439286 TWISTNBQ3B726 338 aaPredicted RBP17.36■□□□□ 0.37
GARNL3-206ENST00000439286 RBM26Q5T8P6 1007 aaKnown RBP17.36■□□□□ 0.37
GARNL3-206ENST00000439286 WWC1Q8IX03 1113 aa17.36■□□□□ 0.37
GARNL3-206ENST00000439286 PI4KAP1Q8N8J0 262 aa17.36■□□□□ 0.37
GARNL3-206ENST00000439286 DCPSQ96C86 337 aaKnown RBP17.36■□□□□ 0.37
GARNL3-206ENST00000439286 CDC5LQ99459 802 aaKnown RBP17.36■□□□□ 0.37
GARNL3-206ENST00000439286 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
GARNL3-206ENST00000439286 MAP2K2P36507 400 aa17.35■□□□□ 0.37
GARNL3-206ENST00000439286 TBC1D10BQ4KMP7 808 aaPredicted RBP17.35■□□□□ 0.37
GARNL3-206ENST00000439286 SAMD7Q7Z3H4 446 aa17.35■□□□□ 0.37
GARNL3-206ENST00000439286 SAPCD2Q86UD0 394 aa17.35■□□□□ 0.37
GARNL3-206ENST00000439286 USP48Q86UV5 1035 aa17.35■□□□□ 0.37
GARNL3-206ENST00000439286 MRS2Q9HD23 443 aa17.35■□□□□ 0.37
GARNL3-206ENST00000439286 ATP2B4P23634 1241 aa17.34■□□□□ 0.37
GARNL3-206ENST00000439286 LTBP1Q14766 1721 aa17.33■□□□□ 0.37
GARNL3-206ENST00000439286 XDHP47989 1333 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 IL16Q14005 1332 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 CTSWP56202 376 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 CCDC184Q52MB2 194 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
GARNL3-206ENST00000439286 KRT26Q7Z3Y9 468 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 KCNQ5Q9NR82 932 aa17.33■□□□□ 0.36
GARNL3-206ENST00000439286 IGKV5-2P06315 115 aa17.32■□□□□ 0.36
GARNL3-206ENST00000439286 VIL1P09327 827 aaKnown RBP17.32■□□□□ 0.36
GARNL3-206ENST00000439286 HSPA8P11142 646 aaKnown RBP17.32■□□□□ 0.36
GARNL3-206ENST00000439286 ANKRD36CQ5JPF3 1778 aa17.31■□□□□ 0.36
GARNL3-206ENST00000439286 IGHMBP2P38935 993 aaKnown RBP17.31■□□□□ 0.36
GARNL3-206ENST00000439286 KIF4BQ2VIQ3 1234 aa17.31■□□□□ 0.36
GARNL3-206ENST00000439286 SULF1Q8IWU6 871 aa17.31■□□□□ 0.36
GARNL3-206ENST00000439286 C2orf69Q8N8R5 385 aa17.31■□□□□ 0.36
GARNL3-206ENST00000439286 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
GARNL3-206ENST00000439286 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 CA12O43570 354 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 AOC2O75106 756 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 HUNKP57058 714 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 FKBP5Q13451 457 aaPredicted RBP17.3■□□□□ 0.36
GARNL3-206ENST00000439286 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
GARNL3-206ENST00000439286 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 AGBL3Q8NEM8 1001 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 TTLL11Q8NHH1 800 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 MYH16Q9H6N6 1097 aa17.3■□□□□ 0.36
GARNL3-206ENST00000439286 BSDC1Q9NW68 430 aaPredicted RBP17.3■□□□□ 0.36
GARNL3-206ENST00000439286 RTL9Q8NET4 1388 aa17.29■□□□□ 0.36
GARNL3-206ENST00000439286 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
GARNL3-206ENST00000439286 UBE3BQ7Z3V4 1068 aa17.29■□□□□ 0.36
GARNL3-206ENST00000439286 DUOX1Q9NRD9 1551 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 USP17L3A6NCW0 530 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 USP17L4A6NCW7 530 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 H7C1W4 665 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 FLIIQ13045 1269 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 NOGQ13253 232 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 G2E3Q7L622 706 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 USP17L1Q7RTZ2 530 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 WDR63Q8IWG1 891 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 MPHOSPH8Q99549 860 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 GREM2Q9H772 168 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 GBA2Q9HCG7 927 aaPredicted RBP17.28■□□□□ 0.36
GARNL3-206ENST00000439286 MINPP1Q9UNW1 487 aa17.28■□□□□ 0.36
GARNL3-206ENST00000439286 ZNF316A6NFI3 1004 aaPredicted RBP17.27■□□□□ 0.36
GARNL3-206ENST00000439286 EGFRP00533 1210 aa17.27■□□□□ 0.36
GARNL3-206ENST00000439286 USP17L8P0C7I0 530 aa17.27■□□□□ 0.36
GARNL3-206ENST00000439286 BRPF1P55201 1214 aaPredicted RBP17.27■□□□□ 0.36
GARNL3-206ENST00000439286 GCKRQ14397 625 aa17.27■□□□□ 0.36
GARNL3-206ENST00000439286 DNAAF4Q8WXU2 420 aa17.27■□□□□ 0.36
GARNL3-206ENST00000439286 ADM5C9JUS6 153 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 CCT4P50991 539 aaKnown RBP17.26■□□□□ 0.35
GARNL3-206ENST00000439286 OGFOD1Q8N543 542 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 FBXW7Q969H0 707 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 CCDC102AQ96A19 550 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 ANKRD2Q9GZV1 360 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 GGA3Q9NZ52 723 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 LEMD3Q9Y2U8 911 aa17.26■□□□□ 0.35
GARNL3-206ENST00000439286 FANCIQ9NVI1 1328 aa17.25■□□□□ 0.35
GARNL3-206ENST00000439286 KCNJ4P48050 445 aa17.25■□□□□ 0.35
GARNL3-206ENST00000439286 ZNF280AP59817 542 aaPredicted RBP17.25■□□□□ 0.35
GARNL3-206ENST00000439286 SCARF1Q14162 830 aa17.25■□□□□ 0.35
GARNL3-206ENST00000439286 RGMBQ6NW40 437 aa17.25■□□□□ 0.35
GARNL3-206ENST00000439286 LINS1Q8NG48 757 aa17.25■□□□□ 0.35
GARNL3-206ENST00000439286 PCNTO95613 3336 aa17.25■□□□□ 0.35
GARNL3-206ENST00000439286 DDX60Q8IY21 1712 aaKnown RBP17.24■□□□□ 0.35
GARNL3-206ENST00000439286 VAMP4O75379 141 aa17.24■□□□□ 0.35
GARNL3-206ENST00000439286 ITGA6P23229 1130 aa17.24■□□□□ 0.35
GARNL3-206ENST00000439286 ZNF157P51786 506 aaPredicted RBP17.24■□□□□ 0.35
GARNL3-206ENST00000439286 ANGEL2Q5VTE6 544 aaKnown RBP17.24■□□□□ 0.35
GARNL3-206ENST00000439286 DLK2Q6UY11 383 aa17.24■□□□□ 0.35
GARNL3-206ENST00000439286 PLA2G12BQ9BX93 195 aa17.24■□□□□ 0.35
GARNL3-206ENST00000439286 COA1Q9GZY4 146 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms