RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 RESTQ13127 1097 aa18.18■□□□□ 0.5
APP-208ENST00000439274 ZNF710Q8N1W2 664 aa18.18■□□□□ 0.5
APP-208ENST00000439274 CLSTN2Q9H4D0 955 aa18.18■□□□□ 0.5
APP-208ENST00000439274 HMGN5P82970 282 aaKnown RBP18.18■□□□□ 0.5
APP-208ENST00000439274 CEBPZQ03701 1054 aaKnown RBP18.18■□□□□ 0.5
APP-208ENST00000439274 KRT32Q14532 448 aa18.18■□□□□ 0.5
APP-208ENST00000439274 A0A087WZG4 1122 aa18.17■□□□□ 0.5
APP-208ENST00000439274 STOX1Q6ZVD7 989 aa18.17■□□□□ 0.5
APP-208ENST00000439274 CADPS2Q86UW7 1296 aa18.17■□□□□ 0.5
APP-208ENST00000439274 DDX19AQ9NUU7 478 aaKnown RBP18.17■□□□□ 0.5
APP-208ENST00000439274 H3BQV1 296 aa18.17■□□□□ 0.5
APP-208ENST00000439274 SCRN1Q12765 414 aa18.17■□□□□ 0.5
APP-208ENST00000439274 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
APP-208ENST00000439274 GOLGA6L6A8MZA4 724 aa18.16■□□□□ 0.5
APP-208ENST00000439274 PPFIA3O75145 1194 aa18.16■□□□□ 0.5
APP-208ENST00000439274 TATP17735 454 aaPredicted RBP18.16■□□□□ 0.5
APP-208ENST00000439274 MCMDC2Q4G0Z9 681 aa18.16■□□□□ 0.5
APP-208ENST00000439274 NRBP1Q9UHY1 535 aa18.16■□□□□ 0.5
APP-208ENST00000439274 U3KPZ7 1027 aaPredicted RBP18.16■□□□□ 0.5
APP-208ENST00000439274 MEGF6O75095 1541 aa18.16■□□□□ 0.5
APP-208ENST00000439274 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.16■□□□□ 0.5
APP-208ENST00000439274 SNRPA1P09661 255 aaKnown RBP18.16■□□□□ 0.5
APP-208ENST00000439274 RABL6Q3YEC7 729 aaPredicted RBP18.16■□□□□ 0.5
APP-208ENST00000439274 TTC5Q8N0Z6 440 aa18.16■□□□□ 0.5
APP-208ENST00000439274 HAUS7Q99871 368 aa18.16■□□□□ 0.5
APP-208ENST00000439274 DNAJC25Q9H1X3 360 aa18.16■□□□□ 0.5
APP-208ENST00000439274 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
APP-208ENST00000439274 FGD1P98174 961 aa18.15■□□□□ 0.5
APP-208ENST00000439274 LRMPQ12912 555 aa18.15■□□□□ 0.5
APP-208ENST00000439274 RBM43Q6ZSC3 357 aaKnown RBP18.15■□□□□ 0.5
APP-208ENST00000439274 FTOQ9C0B1 505 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■□□□□ 10.9
APP-208ENST00000439274 A0A0G2JLW4 131 aa18.15■□□□□ 0.5
APP-208ENST00000439274 GTF2F1P35269 517 aaKnown RBP eCLIP18.15■□□□□ 0.5
APP-208ENST00000439274 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
APP-208ENST00000439274 CCDC186Q7Z3E2 898 aa18.15■□□□□ 0.5
APP-208ENST00000439274 MTERF4Q7Z6M4 381 aaKnown RBP18.15■□□□□ 0.5
APP-208ENST00000439274 TPM3P06753 285 aa18.14■□□□□ 0.49
APP-208ENST00000439274 DRC7Q8IY82 874 aa18.14■□□□□ 0.49
APP-208ENST00000439274 TRIM5Q9C035 493 aa18.14■□□□□ 0.49
APP-208ENST00000439274 AFDNP55196 1824 aaKnown RBP18.14■□□□□ 0.49
APP-208ENST00000439274 GOLIM4O00461 696 aa18.13■□□□□ 0.49
APP-208ENST00000439274 CSB-PGBD3P0DP91 1061 aa18.13■□□□□ 0.49
APP-208ENST00000439274 IFNL2Q8IZJ0 200 aa18.13■□□□□ 0.49
APP-208ENST00000439274 NEUROD6Q96NK8 337 aa18.13■□□□□ 0.49
APP-208ENST00000439274 KIF3AQ9Y496 699 aa18.13■□□□□ 0.49
APP-208ENST00000439274 CYP27B1O15528 508 aa18.13■□□□□ 0.49
APP-208ENST00000439274 ZNF165P49910 485 aa18.13■□□□□ 0.49
APP-208ENST00000439274 ZNF75DP51815 510 aa18.13■□□□□ 0.49
APP-208ENST00000439274 CASP7P55210 303 aa18.13■□□□□ 0.49
APP-208ENST00000439274 APOBRQ0VD83 1088 aa18.13■□□□□ 0.49
APP-208ENST00000439274 RIOK3O14730 519 aaKnown RBP18.12■□□□□ 0.49
APP-208ENST00000439274 KBTBD3Q8NAB2 608 aa18.12■□□□□ 0.49
APP-208ENST00000439274 CTDNEP1O95476 244 aa18.12■□□□□ 0.49
APP-208ENST00000439274 TIMM10P62072 90 aa18.12■□□□□ 0.49
APP-208ENST00000439274 CCT2P78371 535 aaKnown RBP18.12■□□□□ 0.49
APP-208ENST00000439274 PLA2G4DQ86XP0 818 aa18.12■□□□□ 0.49
APP-208ENST00000439274 CABLES1Q8TDN4 633 aa18.12■□□□□ 0.49
APP-208ENST00000439274 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
APP-208ENST00000439274 TNS3Q68CZ2 1445 aa18.12■□□□□ 0.49
APP-208ENST00000439274 CHRNA2Q15822 529 aa18.11■□□□□ 0.49
APP-208ENST00000439274 BRINP3Q76B58 766 aa18.11■□□□□ 0.49
APP-208ENST00000439274 NSUN7Q8NE18 718 aaKnown RBP18.11■□□□□ 0.49
APP-208ENST00000439274 TDRD7Q8NHU6 1098 aaKnown RBP18.11■□□□□ 0.49
APP-208ENST00000439274 SMARCC2Q8TAQ2 1214 aa18.11■□□□□ 0.49
APP-208ENST00000439274 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
APP-208ENST00000439274 NCOA5Q9HCD5 579 aaKnown RBP18.11■□□□□ 0.49
APP-208ENST00000439274 ADD1P35611 737 aaKnown RBP18.11■□□□□ 0.49
APP-208ENST00000439274 CHST3Q7LGC8 479 aa18.11■□□□□ 0.49
APP-208ENST00000439274 NAP1L2Q9ULW6 460 aaPredicted RBP18.11■□□□□ 0.49
APP-208ENST00000439274 RFX7Q2KHR2 1363 aa18.11■□□□□ 0.49
APP-208ENST00000439274 A0A087WWV3 80 aa18.1■□□□□ 0.49
APP-208ENST00000439274 PFKFB2O60825 505 aa18.1■□□□□ 0.49
APP-208ENST00000439274 ZSCAN16Q9H4T2 348 aaPredicted RBP18.1■□□□□ 0.49
APP-208ENST00000439274 PTPDC1A2A3K4 754 aa18.1■□□□□ 0.49
APP-208ENST00000439274 FOXO4P98177 505 aa18.1■□□□□ 0.49
APP-208ENST00000439274 DHX32Q7L7V1 743 aaKnown RBP18.1■□□□□ 0.49
APP-208ENST00000439274 ATG9AQ7Z3C6 839 aa18.1■□□□□ 0.49
APP-208ENST00000439274 GOLPH3LQ9H4A5 285 aa18.1■□□□□ 0.49
APP-208ENST00000439274 PAG1Q9NWQ8 432 aa18.1■□□□□ 0.49
APP-208ENST00000439274 ARFGEF2Q9Y6D5 1785 aa18.1■□□□□ 0.49
APP-208ENST00000439274 SH3TC1Q8TE82 1336 aa18.09■□□□□ 0.49
APP-208ENST00000439274 GUCY1B3Q02153 619 aa18.09■□□□□ 0.49
APP-208ENST00000439274 C11orf57Q6ZUT1 292 aaPredicted RBP18.09■□□□□ 0.49
APP-208ENST00000439274 DCAF5Q96JK2 942 aa18.09■□□□□ 0.49
APP-208ENST00000439274 PKNOX2Q96KN3 472 aa18.09■□□□□ 0.49
APP-208ENST00000439274 CFAP45Q9UL16 551 aa18.09■□□□□ 0.49
APP-208ENST00000439274 COL18A1P39060 1754 aa18.09■□□□□ 0.49
APP-208ENST00000439274 ZSCAN25Q6NSZ9 544 aa18.09■□□□□ 0.49
APP-208ENST00000439274 PLBD2Q8NHP8 589 aa18.09■□□□□ 0.49
APP-208ENST00000439274 CCDC94Q9BW85 323 aaPredicted RBP18.09■□□□□ 0.49
APP-208ENST00000439274 LAMA4Q16363 1823 aa18.08■□□□□ 0.49
APP-208ENST00000439274 CABP4P57796 275 aa18.08■□□□□ 0.49
APP-208ENST00000439274 CHAF1AQ13111 956 aaPredicted RBP18.08■□□□□ 0.49
APP-208ENST00000439274 CCDC144BQ3MJ40 725 aa18.08■□□□□ 0.49
APP-208ENST00000439274 CCAR1Q8IX12 1150 aaKnown RBP18.08■□□□□ 0.49
APP-208ENST00000439274 CCDC144CPQ8IYA2 1237 aa18.08■□□□□ 0.49
APP-208ENST00000439274 ZNF594Q96JF6 807 aaPredicted RBP18.08■□□□□ 0.49
APP-208ENST00000439274 NBPF26B4DH59 902 aa18.08■□□□□ 0.48
APP-208ENST00000439274 NBPF14Q5TI25 921 aa18.08■□□□□ 0.48
APP-208ENST00000439274 NBPF10Q6P3W6 841 aaKnown RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms