RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 GGA1Q9UJY5 639 aa23.61■■□□□ 1.37
AC004540.1-201ENST00000439120 FLIIQ13045 1269 aa23.6■■□□□ 1.37
AC004540.1-201ENST00000439120 FKBP5Q13451 457 aaPredicted RBP23.6■■□□□ 1.37
AC004540.1-201ENST00000439120 DOK7Q18PE1 504 aa23.6■■□□□ 1.37
AC004540.1-201ENST00000439120 PODXL2Q9NZ53 605 aa23.6■■□□□ 1.37
AC004540.1-201ENST00000439120 MYH3P11055 1940 aa23.6■■□□□ 1.37
AC004540.1-201ENST00000439120 NEURL1BA8MQ27 555 aa23.59■■□□□ 1.37
AC004540.1-201ENST00000439120 PSMD14O00487 310 aa23.59■■□□□ 1.37
AC004540.1-201ENST00000439120 MICALL2Q8IY33 904 aa23.59■■□□□ 1.37
AC004540.1-201ENST00000439120 GPR101Q96P66 508 aaPredicted RBP23.59■■□□□ 1.37
AC004540.1-201ENST00000439120 TRPM7Q96QT4 1865 aa23.59■■□□□ 1.37
AC004540.1-201ENST00000439120 RASSF10A6NK89 507 aa23.58■■□□□ 1.37
AC004540.1-201ENST00000439120 TRAF5O00463 557 aa23.58■■□□□ 1.37
AC004540.1-201ENST00000439120 PAXIP1Q6ZW49 1069 aaPredicted RBP23.58■■□□□ 1.37
AC004540.1-201ENST00000439120 AIDAQ96BJ3 306 aa23.58■■□□□ 1.37
AC004540.1-201ENST00000439120 ZBTB12Q9Y330 459 aaPredicted RBP23.58■■□□□ 1.37
AC004540.1-201ENST00000439120 CACNA1FO60840 1977 aa23.58■■□□□ 1.36
AC004540.1-201ENST00000439120 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 FMR1Q06787 632 aaKnown RBP eCLIP23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 ZC3H15Q8WU90 426 aaKnown RBP23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 DPF2Q92785 391 aa23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 XDHP47989 1333 aa23.57■■□□□ 1.36
AC004540.1-201ENST00000439120 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
AC004540.1-201ENST00000439120 TRPM4Q8TD43 1214 aa23.56■■□□□ 1.36
AC004540.1-201ENST00000439120 SPEF2Q9C093 1822 aa23.55■■□□□ 1.36
AC004540.1-201ENST00000439120 TNS4Q8IZW8 715 aa23.55■■□□□ 1.36
AC004540.1-201ENST00000439120 TTLL11Q8NHH1 800 aa23.55■■□□□ 1.36
AC004540.1-201ENST00000439120 DNAAF4Q8WXU2 420 aa23.55■■□□□ 1.36
AC004540.1-201ENST00000439120 SHTN1A0MZ66 631 aa23.54■■□□□ 1.36
AC004540.1-201ENST00000439120 VAMP4O75379 141 aa23.54■■□□□ 1.36
AC004540.1-201ENST00000439120 GCKRQ14397 625 aa23.54■■□□□ 1.36
AC004540.1-201ENST00000439120 GLIS2Q9BZE0 524 aaPredicted RBP23.54■■□□□ 1.36
AC004540.1-201ENST00000439120 GREM2Q9H772 168 aa23.54■■□□□ 1.36
AC004540.1-201ENST00000439120 WDR33Q9C0J8 1336 aaKnown RBP23.54■■□□□ 1.36
AC004540.1-201ENST00000439120 H7C1W4 665 aa23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 ATP2B4P23634 1241 aa23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 HIRAP54198 1017 aaPredicted RBP23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 CDC37L1Q7L3B6 337 aa23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 LINS1Q8NG48 757 aa23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 KCNQ5Q9NR82 932 aa23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 PGAP2Q9UHJ9 254 aa23.53■■□□□ 1.36
AC004540.1-201ENST00000439120 RTL9Q8NET4 1388 aa23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 CELF2O95319 508 aaKnown RBP23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 ECE1P42892 770 aa23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 GRM1Q13255 1194 aa23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 TBC1D10BQ4KMP7 808 aaPredicted RBP23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 CST9Q5W186 159 aa23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 SAMD7Q7Z3H4 446 aa23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 ZNF408Q9H9D4 720 aa23.52■■□□□ 1.36
AC004540.1-201ENST00000439120 IGHMBP2P38935 993 aaKnown RBP23.51■■□□□ 1.35
AC004540.1-201ENST00000439120 BSDC1Q9NW68 430 aaPredicted RBP23.51■■□□□ 1.35
AC004540.1-201ENST00000439120 FOXN1O15353 648 aa23.5■■□□□ 1.35
AC004540.1-201ENST00000439120 RBM26Q5T8P6 1007 aaKnown RBP23.5■■□□□ 1.35
AC004540.1-201ENST00000439120 TLL2Q9Y6L7 1015 aa23.5■■□□□ 1.35
AC004540.1-201ENST00000439120 SCN9AQ15858 1988 aa23.49■■□□□ 1.35
AC004540.1-201ENST00000439120 VIL1P09327 827 aaKnown RBP23.49■■□□□ 1.35
AC004540.1-201ENST00000439120 MAP2K1Q02750 393 aaPredicted RBP23.49■■□□□ 1.35
AC004540.1-201ENST00000439120 CAPNS2Q96L46 248 aa23.49■■□□□ 1.35
AC004540.1-201ENST00000439120 MINPP1Q9UNW1 487 aa23.49■■□□□ 1.35
AC004540.1-201ENST00000439120 CTCFP49711 727 aaPredicted RBP23.48■■□□□ 1.35
AC004540.1-201ENST00000439120 DCPSQ96C86 337 aaKnown RBP23.48■■□□□ 1.35
AC004540.1-201ENST00000439120 MPHOSPH8Q99549 860 aa23.48■■□□□ 1.35
AC004540.1-201ENST00000439120 PLA2G12BQ9BX93 195 aa23.48■■□□□ 1.35
AC004540.1-201ENST00000439120 SPINK5Q9NQ38 1064 aaPredicted RBP23.48■■□□□ 1.35
AC004540.1-201ENST00000439120 ITGA6P23229 1130 aa23.47■■□□□ 1.35
AC004540.1-201ENST00000439120 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
AC004540.1-201ENST00000439120 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
AC004540.1-201ENST00000439120 CYP4F22Q6NT55 531 aa23.47■■□□□ 1.35
AC004540.1-201ENST00000439120 USP48Q86UV5 1035 aa23.47■■□□□ 1.35
AC004540.1-201ENST00000439120 WBP1LQ9NX94 342 aa23.47■■□□□ 1.35
AC004540.1-201ENST00000439120 CCT4P50991 539 aaKnown RBP23.46■■□□□ 1.35
AC004540.1-201ENST00000439120 RSBN1LQ6PCB5 846 aaPredicted RBP23.46■■□□□ 1.35
AC004540.1-201ENST00000439120 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
AC004540.1-201ENST00000439120 PODNQ7Z5L7 613 aa23.46■■□□□ 1.35
AC004540.1-201ENST00000439120 BEGAINQ9BUH8 593 aa23.46■■□□□ 1.35
AC004540.1-201ENST00000439120 MED23Q9ULK4 1368 aa23.46■■□□□ 1.35
AC004540.1-201ENST00000439120 PSME4Q14997 1843 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 USP17L3A6NCW0 530 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 USP17L4A6NCW7 530 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 F6X3S4 739 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 EGFRP00533 1210 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 USP17L1Q7RTZ2 530 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 SAPCD2Q86UD0 394 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 AGBL3Q8NEM8 1001 aa23.45■■□□□ 1.34
AC004540.1-201ENST00000439120 CASP7P55210 303 aa23.44■■□□□ 1.34
AC004540.1-201ENST00000439120 ANKRD2Q9GZV1 360 aa23.44■■□□□ 1.34
AC004540.1-201ENST00000439120 LEMD3Q9Y2U8 911 aa23.44■■□□□ 1.34
AC004540.1-201ENST00000439120 CHMP3Q9Y3E7 222 aa23.44■■□□□ 1.34
AC004540.1-201ENST00000439120 ANKRD18BA2A2Z9 1011 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 CAPN15O75808 1086 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 CSF1RP07333 972 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 KCNJ4P48050 445 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 FBXW7Q969H0 707 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 PRDM10Q9NQV6 1147 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 THSD7BQ9C0I4 1608 aa23.43■■□□□ 1.34
AC004540.1-201ENST00000439120 ZNF609O15014 1411 aa23.42■■□□□ 1.34
AC004540.1-201ENST00000439120 BEND3Q5T5X7 828 aa23.42■■□□□ 1.34
AC004540.1-201ENST00000439120 SULF1Q8IWU6 871 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms