RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 SPDYE3A6NKU9 549 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 LMOD1P29536 600 aaPredicted RBP15.69■□□□□ 0.1
LRCH3-206ENST00000438796 BMS1Q14692 1282 aaKnown RBP15.69■□□□□ 0.1
LRCH3-206ENST00000438796 CEP112Q8N8E3 955 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 IMPG2Q9BZV3 1241 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 TBC1D9Q6ZT07 1266 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 MICALCLQ6ZW33 695 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 IPO4Q8TEX9 1081 aaKnown RBP15.69■□□□□ 0.1
LRCH3-206ENST00000438796 ZWINTO95229 277 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 UBASH3AP57075 661 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 RAB3GAP1Q15042 981 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 MAGEB6Q8N7X4 407 aa15.69■□□□□ 0.1
LRCH3-206ENST00000438796 GNG11P61952 73 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC155Q8N6L0 562 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 PTPRCP08575 1304 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 TIGD1Q96MW7 591 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 KIF2AO00139 706 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 PDIA4P13667 645 aaKnown RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 MCM7P33993 719 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 PRKG1Q13976 671 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 IFI16Q16666 785 aaKnown RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 DHX58Q96C10 678 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 ZNF830Q96NB3 372 aaPredicted RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 KRT23Q9C075 422 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 LRRC27Q9C0I9 530 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 NSFL1CQ9UNZ2 370 aaKnown RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 BACH1O14867 736 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 UQCRFS1P1P0C7P4 283 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 RXRAP19793 462 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 GPATCH11Q8N954 259 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 NKTRP30414 1462 aaKnown RBP15.68■□□□□ 0.1
LRCH3-206ENST00000438796 Q6ZUG5 572 aa15.68■□□□□ 0.1
LRCH3-206ENST00000438796 TRIM27P14373 513 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 C6orf163Q5TEZ5 329 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 KANK3Q6NY19 840 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
LRCH3-206ENST00000438796 C6orf50Q9HD87 102 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 CD109Q6YHK3 1445 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 TNNI2P48788 182 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 JDP2Q8WYK2 163 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 UIMC1Q96RL1 719 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC172P0C7W6 258 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 RFX1P22670 979 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 FBF1Q8TES7 1133 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 NBPF7P0C2Y1 421 aaPredicted RBP15.67■□□□□ 0.1
LRCH3-206ENST00000438796 COPS6Q7L5N1 327 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 BRF1Q92994 677 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 ZC3H12CQ9C0D7 883 aaKnown RBP15.67■□□□□ 0.1
LRCH3-206ENST00000438796 MBIPQ9NS73 344 aa15.67■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC160A6NGH7 325 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 ESR2Q92731 530 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 CAPZA3Q96KX2 299 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 RMND1Q9NWS8 449 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 RASA3Q14644 834 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 ZYXQ15942 572 aaKnown RBP15.66■□□□□ 0.1
LRCH3-206ENST00000438796 CFAP58Q5T655 872 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 SPECC1LQ69YQ0 1117 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 ZSCAN30Q86W11 494 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 BBXQ8WY36 941 aaPredicted RBP15.66■□□□□ 0.1
LRCH3-206ENST00000438796 DDX19AQ9NUU7 478 aaKnown RBP15.66■□□□□ 0.1
LRCH3-206ENST00000438796 MCM9Q9NXL9 1143 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 CAMSAP2Q08AD1 1489 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 KRT5P13647 590 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 SLC9C2Q5TAH2 1124 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 CEP135Q66GS9 1140 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 SELENOSQ9BQE4 189 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 ZKSCAN3Q9BRR0 538 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 GINS2Q9Y248 185 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 CKAP4Q07065 602 aaKnown RBP15.66■□□□□ 0.1
LRCH3-206ENST00000438796 TTC12Q9H892 705 aaPredicted RBP15.66■□□□□ 0.1
LRCH3-206ENST00000438796 ACEP12821 1306 aa15.66■□□□□ 0.1
LRCH3-206ENST00000438796 RRP36Q96EU6 259 aaKnown RBP15.65■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC25Q86WR0 208 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 DZIP3Q86Y13 1208 aaKnown RBP15.65■□□□□ 0.1
LRCH3-206ENST00000438796 CGNQ9P2M7 1197 aaKnown RBP15.65■□□□□ 0.1
LRCH3-206ENST00000438796 MSH6P52701 1360 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 PIK3R4Q99570 1358 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 EP400NLQ6ZTU2 488 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC65Q8IXS2 484 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 KRT9P35527 623 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 SELENOOQ9BVL4 669 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 EIF6P56537 245 aaKnown RBP15.65■□□□□ 0.1
LRCH3-206ENST00000438796 DDB1Q16531 1140 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 SPATA24Q86W54 205 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 MAK16Q9BXY0 300 aaKnown RBP15.65■□□□□ 0.1
LRCH3-206ENST00000438796 CNPY2Q9Y2B0 182 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 ZNF165P49910 485 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 DCAF17Q5H9S7 520 aaPredicted RBP15.65■□□□□ 0.1
LRCH3-206ENST00000438796 CCDC114Q96M63 670 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 NOD1Q9Y239 953 aa15.65■□□□□ 0.1
LRCH3-206ENST00000438796 FAM170AA1A519 330 aa15.64■□□□□ 0.09
LRCH3-206ENST00000438796 USP37Q86T82 979 aa15.64■□□□□ 0.09
LRCH3-206ENST00000438796 HAUS7Q99871 368 aa15.64■□□□□ 0.09
LRCH3-206ENST00000438796 PA2G4Q9UQ80 394 aaKnown RBP15.64■□□□□ 0.09
LRCH3-206ENST00000438796 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms