RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 DDX21Q9NR30 783 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 NEURL1BA8MQ27 555 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 CHGBP05060 677 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 PTPN14Q15678 1187 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 ACSBG1Q96GR2 724 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 CCDC34Q96HJ3 373 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 SLC26A6Q9BXS9 759 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 FTOQ9C0B1 505 aaKnown RBP eCLIP13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 SLC52A2Q9HAB3 445 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 COL3A1P02461 1466 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 METTL22Q9BUU2 404 aaPredicted RBP13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 ANO10Q9NW15 660 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 RGS12O14924 1447 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 GCKRQ14397 625 aa13.59□□□□□ -0.23
PDLIM5-206ENST00000437932 GOLGA8AA7E2F4 631 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 SPECC1Q5M775 1068 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 NR1I2O75469 434 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 CBX8Q9HC52 389 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 AKAP2Q9Y2D5 859 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 ADAMTS2O95450 1211 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 HSPA2P54652 639 aa13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 ZCRB1Q8TBF4 217 aaKnown RBP13.58□□□□□ -0.24
PDLIM5-206ENST00000437932 PRC1O43663 620 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 MYL10Q9BUA6 226 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 NAPBQ9H115 298 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 MAP2P11137 1827 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 METAP2P50579 478 aaKnown RBP eCLIP13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 CEP135Q66GS9 1140 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 KDRP35968 1356 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 STARD3NLO95772 234 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 HMGB1P09429 215 aaKnown RBP13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 PTPN21Q16825 1174 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 OSBPL3Q9H4L5 887 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 SLC12A7Q9Y666 1083 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 TMEM67Q5HYA8 995 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 JAG2Q9Y219 1238 aa13.57□□□□□ -0.24
PDLIM5-206ENST00000437932 AOX1Q06278 1338 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 VWDEQ8N2E2 1590 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 ANKRD18BA2A2Z9 1011 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 RNF113AO15541 343 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 LRRC24Q50LG9 513 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 MIGA1Q8NAN2 632 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 LEO1Q8WVC0 666 aaPredicted RBP13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 A0A1B0GUL7 405 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 G3V3G9 751 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 DYNC1I1O14576 645 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 MCM5P33992 734 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 TTLL7Q6ZT98 887 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 UBAC1Q9BSL1 405 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 ARHGAP31Q2M1Z3 1444 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 SLC3A2P08195 630 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 SLC9C2Q5TAH2 1124 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 TRIM22Q8IYM9 498 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 TPM1P09493 284 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 LRMPQ12912 555 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 MTERF4Q7Z6M4 381 aaKnown RBP13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 STAP2Q9UGK3 403 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 PLEKHG1Q9ULL1 1385 aa13.56□□□□□ -0.24
PDLIM5-206ENST00000437932 CPSF1Q10570 1443 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 CRB1P82279 1406 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 MAPK8IP2Q13387 824 aaPredicted RBP13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 ZSCAN25Q6NSZ9 544 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 NCOA7Q8NI08 942 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 NRBP1Q9UHY1 535 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 RANBP6O60518 1105 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 SKILP12757 684 aa13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 SSRP1Q08945 709 aaKnown RBP13.55□□□□□ -0.24
PDLIM5-206ENST00000437932 ALG1Q9BT22 464 aa13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 PYCARDQ9ULZ3 195 aa13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 PREX1Q8TCU6 1659 aa13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 A0A0U1RQG5 324 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 ZSWIM6Q9HCJ5 1215 aa13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 LMOD1P29536 600 aaPredicted RBP13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 TSR1Q2NL82 804 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 NACAP1Q9BZK3 213 aa13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 SFPQP23246 707 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 DHX32Q7L7V1 743 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 PUS3Q9BZE2 481 aaKnown RBP13.54□□□□□ -0.24
PDLIM5-206ENST00000437932 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 ZSWIM4Q9H7M6 989 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 SASH1O94885 1247 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 TTC6Q86TZ1 520 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 ZSCAN16Q9H4T2 348 aaPredicted RBP13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 CDKL5O76039 1030 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 PIP4K2BP78356 416 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 EPHA10Q5JZY3 1008 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 CMTR1Q8N1G2 835 aaKnown RBP13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 XBP1P17861 261 aa13.53□□□□□ -0.24
PDLIM5-206ENST00000437932 DHX8Q14562 1220 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms