RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 ZC3H12CQ9C0D7 883 aaKnown RBP19.53■□□□□ 0.72
CSNK1E-208ENST00000431611 PDE8AO60658 829 aa19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 RPS12P25398 132 aaKnown RBP19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 MAP2K2P36507 400 aa19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 SAMD7Q7Z3H4 446 aa19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 JARID2Q92833 1246 aaPredicted RBP19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 KCNQ5Q9NR82 932 aa19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 PODXL2Q9NZ53 605 aa19.52■□□□□ 0.72
CSNK1E-208ENST00000431611 COL4A1P02462 1669 aa19.52■□□□□ 0.71
CSNK1E-208ENST00000431611 AOC2O75106 756 aa19.51■□□□□ 0.71
CSNK1E-208ENST00000431611 TBC1D10BQ4KMP7 808 aaPredicted RBP19.51■□□□□ 0.71
CSNK1E-208ENST00000431611 USP48Q86UV5 1035 aa19.51■□□□□ 0.71
CSNK1E-208ENST00000431611 HHIPL1Q96JK4 782 aa19.51■□□□□ 0.71
CSNK1E-208ENST00000431611 ANKIB1Q9P2G1 1089 aa19.51■□□□□ 0.71
CSNK1E-208ENST00000431611 RTL9Q8NET4 1388 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 G3V3G9 751 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 UFL1O94874 794 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 RBM26Q5T8P6 1007 aaKnown RBP19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 DCAF8Q5TAQ9 597 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 TSPYL6Q8N831 410 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 CCDC85AQ96PX6 553 aaPredicted RBP19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 GGA1Q9UJY5 639 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 MAP3K2Q9Y2U5 619 aa19.5■□□□□ 0.71
CSNK1E-208ENST00000431611 THSD7BQ9C0I4 1608 aa19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 EGFRP00533 1210 aa19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 KSR2Q6VAB6 950 aa19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 ANKRD18AQ8IVF6 992 aa19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 TSR2Q969E8 191 aaKnown RBP19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 TRPM7Q96QT4 1865 aa19.48■□□□□ 0.71
CSNK1E-208ENST00000431611 PI4KAP2A4QPH2 592 aa19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 VIL1P09327 827 aaKnown RBP19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 CCDC184Q52MB2 194 aa19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 DLK2Q6UY11 383 aa19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 PI4KAP1Q8N8J0 262 aa19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 DCPSQ96C86 337 aaKnown RBP19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 STK31Q9BXU1 1019 aa19.47■□□□□ 0.71
CSNK1E-208ENST00000431611 IGKV5-2P06315 115 aa19.46■□□□□ 0.71
CSNK1E-208ENST00000431611 NEXNQ0ZGT2 675 aa19.46■□□□□ 0.71
CSNK1E-208ENST00000431611 CCDC27Q2M243 656 aa19.46■□□□□ 0.71
CSNK1E-208ENST00000431611 XDHP47989 1333 aa19.46■□□□□ 0.71
CSNK1E-208ENST00000431611 CTSWP56202 376 aa19.45■□□□□ 0.7
CSNK1E-208ENST00000431611 HUNKP57058 714 aa19.45■□□□□ 0.7
CSNK1E-208ENST00000431611 KIF4BQ2VIQ3 1234 aa19.45■□□□□ 0.7
CSNK1E-208ENST00000431611 TSKSQ9UJT2 592 aa19.45■□□□□ 0.7
CSNK1E-208ENST00000431611 CA12O43570 354 aa19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 BRPF1P55201 1214 aaPredicted RBP19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 WWC1Q8IX03 1113 aa19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 ABHD8Q96I13 439 aa19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 CDC5LQ99459 802 aaKnown RBP19.44■□□□□ 0.7
CSNK1E-208ENST00000431611 ADM5C9JUS6 153 aa19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 NOGQ13253 232 aa19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 RSBN1LQ6PCB5 846 aaPredicted RBP19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 C2orf69Q8N8R5 385 aa19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 AGBL3Q8NEM8 1001 aa19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 TTLL11Q8NHH1 800 aa19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 GBA2Q9HCG7 927 aaPredicted RBP19.43■□□□□ 0.7
CSNK1E-208ENST00000431611 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
CSNK1E-208ENST00000431611 CWF19L2Q2TBE0 894 aaKnown RBP19.42■□□□□ 0.7
CSNK1E-208ENST00000431611 SULF1Q8IWU6 871 aa19.42■□□□□ 0.7
CSNK1E-208ENST00000431611 GGA3Q9NZ52 723 aa19.42■□□□□ 0.7
CSNK1E-208ENST00000431611 NEURL1BA8MQ27 555 aa19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 ZNF280AP59817 542 aaPredicted RBP19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 RGMBQ6NW40 437 aa19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 G2E3Q7L622 706 aa19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 PODNQ7Z5L7 613 aa19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 GREM2Q9H772 168 aa19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 BSDC1Q9NW68 430 aaPredicted RBP19.41■□□□□ 0.7
CSNK1E-208ENST00000431611 ZIC5Q96T25 663 aa19.4■□□□□ 0.7
CSNK1E-208ENST00000431611 MINPP1Q9UNW1 487 aa19.4■□□□□ 0.7
CSNK1E-208ENST00000431611 ASTN2O75129 1339 aaPredicted RBP19.4■□□□□ 0.7
CSNK1E-208ENST00000431611 IL16Q14005 1332 aa19.4■□□□□ 0.7
CSNK1E-208ENST00000431611 USP17L3A6NCW0 530 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 USP17L4A6NCW7 530 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 H7C1W4 665 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 USP17L8P0C7I0 530 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 SCARF1Q14162 830 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 USP17L1Q7RTZ2 530 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 UBE3BQ7Z3V4 1068 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 GMLQ99445 158 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 ZNF609O15014 1411 aa19.39■□□□□ 0.69
CSNK1E-208ENST00000431611 WTIPA6NIX2 430 aaPredicted RBP19.38■□□□□ 0.69
CSNK1E-208ENST00000431611 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
CSNK1E-208ENST00000431611 ANGEL2Q5VTE6 544 aaKnown RBP19.38■□□□□ 0.69
CSNK1E-208ENST00000431611 CCDC102AQ96A19 550 aa19.38■□□□□ 0.69
CSNK1E-208ENST00000431611 MED23Q9ULK4 1368 aa19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 FAM155AB1AL88 458 aaPredicted RBP19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 CCT4P50991 539 aaKnown RBP19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 ZNF157P51786 506 aaPredicted RBP19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 FLIIQ13045 1269 aa19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 CDCA5Q96FF9 252 aa19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 MRS2Q9HD23 443 aa19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 MYOZ2Q9NPC6 264 aa19.37■□□□□ 0.69
CSNK1E-208ENST00000431611 SCN9AQ15858 1988 aa19.36■□□□□ 0.69
CSNK1E-208ENST00000431611 IGHMBP2P38935 993 aaKnown RBP19.36■□□□□ 0.69
CSNK1E-208ENST00000431611 GCKRQ14397 625 aa19.36■□□□□ 0.69
CSNK1E-208ENST00000431611 KIF23Q02241 960 aaPredicted RBP19.35■□□□□ 0.69
CSNK1E-208ENST00000431611 FKBP5Q13451 457 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms