RNA–Protein interactions for RNA: ENST00000429344.6

CACTIN-203, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACTIN, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-203ENST00000429344 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
CACTIN-203ENST00000429344 SH2B1Q9NRF2 756 aaPredicted RBP17.59■□□□□ 0.41
CACTIN-203ENST00000429344 POLA2Q14181 598 aa17.59■□□□□ 0.41
CACTIN-203ENST00000429344 VPS53Q5VIR6 699 aa17.59■□□□□ 0.41
CACTIN-203ENST00000429344 RGPD1P0DJD0 1748 aa17.58■□□□□ 0.41
CACTIN-203ENST00000429344 CWC25Q9NXE8 425 aaPredicted RBP17.58■□□□□ 0.41
CACTIN-203ENST00000429344 CCDC171Q6TFL3 1326 aa17.58■□□□□ 0.41
CACTIN-203ENST00000429344 EXOC5O00471 708 aa17.58■□□□□ 0.4
CACTIN-203ENST00000429344 NR1I2O75469 434 aa17.58■□□□□ 0.4
CACTIN-203ENST00000429344 MRVI1Q9Y6F6 885 aa17.58■□□□□ 0.4
CACTIN-203ENST00000429344 CHGBP05060 677 aa17.58■□□□□ 0.4
CACTIN-203ENST00000429344 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
CACTIN-203ENST00000429344 CCDC112Q8NEF3 446 aa17.58■□□□□ 0.4
CACTIN-203ENST00000429344 A0A0D9SFI3 127 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 ARID5BQ14865 1188 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 PSMA5P28066 241 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 CCDC129Q6ZRS4 1044 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 EAF2Q96CJ1 260 aaPredicted RBP17.57■□□□□ 0.4
CACTIN-203ENST00000429344 STARD3NLO95772 234 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 EPHA10Q5JZY3 1008 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 TMEM87AQ8NBN3 555 aa17.57■□□□□ 0.4
CACTIN-203ENST00000429344 PDCP20941 246 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 PDIA6Q15084 440 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 ZRSR1Q15695 479 aaKnown RBP17.56■□□□□ 0.4
CACTIN-203ENST00000429344 DNAJC10Q8IXB1 793 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 CARD10Q9BWT7 1032 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 FTOQ9C0B1 505 aaKnown RBP eCLIP17.56■□□□□ 0.4
CACTIN-203ENST00000429344 SLC27A2O14975 620 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 CCT2P78371 535 aaKnown RBP17.56■□□□□ 0.4
CACTIN-203ENST00000429344 PLBD2Q8NHP8 589 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 ASAP1Q9ULH1 1129 aa17.56■□□□□ 0.4
CACTIN-203ENST00000429344 TFCP2Q12800 502 aa17.55■□□□□ 0.4
CACTIN-203ENST00000429344 EVI5LQ96CN4 794 aa17.55■□□□□ 0.4
CACTIN-203ENST00000429344 CCDC57Q2TAC2 916 aa17.55■□□□□ 0.4
CACTIN-203ENST00000429344 BRF1Q92994 677 aa17.55■□□□□ 0.4
CACTIN-203ENST00000429344 ST3GAL1Q11201 340 aa17.55■□□□□ 0.4
CACTIN-203ENST00000429344 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
CACTIN-203ENST00000429344 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.55■□□□□ 0.4
CACTIN-203ENST00000429344 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
CACTIN-203ENST00000429344 ZNF142P52746 1687 aaPredicted RBP17.54■□□□□ 0.4
CACTIN-203ENST00000429344 TPM3P06753 285 aa17.54■□□□□ 0.4
CACTIN-203ENST00000429344 ZSCAN20P17040 1043 aaPredicted RBP17.54■□□□□ 0.4
CACTIN-203ENST00000429344 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
CACTIN-203ENST00000429344 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 ZNF589Q86UQ0 364 aaPredicted RBP17.53■□□□□ 0.4
CACTIN-203ENST00000429344 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
CACTIN-203ENST00000429344 AOX1Q06278 1338 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 TTC41PQ6P2S7 1318 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 ERVV-2B6SEH9 535 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 DDX46Q7L014 1031 aaKnown RBP17.53■□□□□ 0.4
CACTIN-203ENST00000429344 ZNF594Q96JF6 807 aaPredicted RBP17.53■□□□□ 0.4
CACTIN-203ENST00000429344 SEC62Q99442 399 aaKnown RBP17.53■□□□□ 0.4
CACTIN-203ENST00000429344 FUCA2Q9BTY2 467 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 RAB11FIP4Q86YS3 637 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 SPTLC3Q9NUV7 552 aa17.53■□□□□ 0.4
CACTIN-203ENST00000429344 SASH1O94885 1247 aa17.52■□□□□ 0.4
CACTIN-203ENST00000429344 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.4
CACTIN-203ENST00000429344 CACTINQ8WUQ7 758 aaKnown RBP17.52■□□□□ 0.4
CACTIN-203ENST00000429344 FAM89AQ96GI7 184 aa17.52■□□□□ 0.4
CACTIN-203ENST00000429344 LMTK3Q96Q04 1460 aa17.52■□□□□ 0.39
CACTIN-203ENST00000429344 DCCP43146 1447 aa17.52■□□□□ 0.39
CACTIN-203ENST00000429344 ME1P48163 572 aa17.52■□□□□ 0.39
CACTIN-203ENST00000429344 PLCD3Q8N3E9 789 aa17.52■□□□□ 0.39
CACTIN-203ENST00000429344 ZNF75DP51815 510 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 DMTNQ08495 405 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 ISM2Q6H9L7 571 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 ZSCAN25Q6NSZ9 544 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 NBPF26B4DH59 902 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 TIMM10P62072 90 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 SLFNL1Q499Z3 407 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 NBPF14Q5TI25 921 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 NBPF10Q6P3W6 841 aaKnown RBP17.51■□□□□ 0.39
CACTIN-203ENST00000429344 NBPF15Q8N660 670 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 SOS2Q07890 1332 aaPredicted RBP17.51■□□□□ 0.39
CACTIN-203ENST00000429344 NECTIN1Q15223 517 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 Q6ZUG5 572 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 ZBTB9Q96C00 473 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 DBNDD2Q9BQY9 259 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
CACTIN-203ENST00000429344 BIN1O00499 593 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 CCDC144BQ3MJ40 725 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 SNRKQ9NRH2 765 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 HIP1O00291 1037 aa17.5■□□□□ 0.39
CACTIN-203ENST00000429344 SF3A1Q15459 793 aaKnown RBP17.5■□□□□ 0.39
CACTIN-203ENST00000429344 DDX19AQ9NUU7 478 aaKnown RBP17.49■□□□□ 0.39
CACTIN-203ENST00000429344 ERICH4A6NGS2 130 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 GOLIM4O00461 696 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 KAZALD1Q96I82 304 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 SLIT3O75094 1523 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 RGPD2P0DJD1 1756 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 CEP135Q66GS9 1140 aa17.49■□□□□ 0.39
CACTIN-203ENST00000429344 NCOA5Q9HCD5 579 aaKnown RBP17.49■□□□□ 0.39
CACTIN-203ENST00000429344 CGNQ9P2M7 1197 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms