RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 MPHOSPH8Q99549 860 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 CNNM1Q9NRU3 951 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 BSDC1Q9NW68 430 aaPredicted RBP11.06□□□□□ -0.64
NR1I3-209ENST00000428574 DBNLQ9UJU6 430 aaKnown RBP11.06□□□□□ -0.64
NR1I3-209ENST00000428574 EP400Q96L91 3159 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
NR1I3-209ENST00000428574 KLRG2A4D1S0 409 aaPredicted RBP11.05□□□□□ -0.64
NR1I3-209ENST00000428574 ANP32AP39687 249 aaKnown RBP11.05□□□□□ -0.64
NR1I3-209ENST00000428574 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
NR1I3-209ENST00000428574 SLC15A2Q16348 729 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 LRRC24Q50LG9 513 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 METTL24Q5JXM2 366 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 TMC4Q7Z404 712 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 ANKRD18AQ8IVF6 992 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 STK32BQ9NY57 414 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 PNPLA7Q6ZV29 1317 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 RAD50Q92878 1312 aa11.05□□□□□ -0.64
NR1I3-209ENST00000428574 A0A1B0GUL7 405 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 POLRMTO00411 1230 aaKnown RBP11.04□□□□□ -0.64
NR1I3-209ENST00000428574 IGSF3O75054 1194 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 SERPINB2P05120 415 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 FGFR2P21802 821 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 RBM25P49756 843 aaKnown RBP11.04□□□□□ -0.64
NR1I3-209ENST00000428574 ATP2B3Q16720 1220 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 LRRFIP1Q32MZ4 808 aaKnown RBP11.04□□□□□ -0.64
NR1I3-209ENST00000428574 PRR5LQ6MZQ0 368 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 RUFY2Q8WXA3 655 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 LPIN2Q92539 896 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 ZNF594Q96JF6 807 aaPredicted RBP11.04□□□□□ -0.64
NR1I3-209ENST00000428574 TBC1D32Q96NH3 1257 aa11.04□□□□□ -0.64
NR1I3-209ENST00000428574 NPHP1O15259 732 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 CHMLP26374 656 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-209ENST00000428574 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 BICDL1Q6ZP65 573 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 DDX46Q7L014 1031 aaKnown RBP11.03□□□□□ -0.64
NR1I3-209ENST00000428574 COL23A1Q86Y22 540 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-209ENST00000428574 HAUS7Q99871 368 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 PUS3Q9BZE2 481 aaKnown RBP11.03□□□□□ -0.64
NR1I3-209ENST00000428574 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 CCDC8Q9H0W5 538 aaPredicted RBP11.03□□□□□ -0.64
NR1I3-209ENST00000428574 SNRKQ9NRH2 765 aa11.03□□□□□ -0.64
NR1I3-209ENST00000428574 FAM177BA6PVY3 158 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 TRIM6-TRIM34B2RNG4 842 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 IFIT1P09914 478 aaKnown RBP11.02□□□□□ -0.65
NR1I3-209ENST00000428574 SLC5A1P13866 664 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 RPS8P62241 208 aaKnown RBP11.02□□□□□ -0.65
NR1I3-209ENST00000428574 GRAPQ13588 217 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 UBE4AQ14139 1066 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-209ENST00000428574 GRAPLQ8TC17 118 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-209ENST00000428574 DDRGK1Q96HY6 314 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 CRAMP1Q96RY5 1269 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 DBNDD2Q9BQY9 259 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 BRIP1Q9BX63 1249 aa11.02□□□□□ -0.65
NR1I3-209ENST00000428574 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
NR1I3-209ENST00000428574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.02□□□□□ -0.65
NR1I3-209ENST00000428574 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
NR1I3-209ENST00000428574 ARID4AP29374 1257 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-209ENST00000428574 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
NR1I3-209ENST00000428574 DDR1Q08345 913 aa11.01□□□□□ -0.65
NR1I3-209ENST00000428574 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
NR1I3-209ENST00000428574 XAGE2Q96GT9 111 aa11.01□□□□□ -0.65
NR1I3-209ENST00000428574 ESYT1Q9BSJ8 1104 aa11.01□□□□□ -0.65
NR1I3-209ENST00000428574 SEC31BQ9NQW1 1179 aa11.01□□□□□ -0.65
NR1I3-209ENST00000428574 PDS5AQ29RF7 1337 aaKnown RBP11.01□□□□□ -0.65
NR1I3-209ENST00000428574 CASZ1Q86V15 1759 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 BBOX1O75936 387 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 ZFYP08048 801 aaPredicted RBP11□□□□□ -0.65
NR1I3-209ENST00000428574 PDE6BP35913 854 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 TTF1Q15361 905 aaPredicted RBP11□□□□□ -0.65
NR1I3-209ENST00000428574 GORABQ5T7V8 394 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 TSHZ3Q63HK5 1081 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 SMIM5Q71RC9 77 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 KBTBD3Q8NAB2 608 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 RILPL2Q969X0 211 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 IL17RAQ96F46 866 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 RBM17Q96I25 401 aaKnown RBP11□□□□□ -0.65
NR1I3-209ENST00000428574 NEUROD6Q96NK8 337 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 CCDC85AQ96PX6 553 aaPredicted RBP11□□□□□ -0.65
NR1I3-209ENST00000428574 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 ANO8Q9HCE9 1232 aaPredicted RBP11□□□□□ -0.65
NR1I3-209ENST00000428574 DIAPH3Q9NSV4 1193 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 PARP3Q9Y6F1 533 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 ZNF804BA4D1E1 1349 aa11□□□□□ -0.65
NR1I3-209ENST00000428574 A0A1B0GUL6 1792 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 SEMA3EO15041 775 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 SGSM2O43147 1006 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 SEC24BO95487 1268 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
NR1I3-209ENST00000428574 TIMM10P62072 90 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 CHRNDQ07001 517 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 TTC39AQ5SRH9 613 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 C15orf52Q6ZUT6 534 aaKnown RBP10.99□□□□□ -0.65
NR1I3-209ENST00000428574 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
NR1I3-209ENST00000428574 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
NR1I3-209ENST00000428574 DUOX1Q9NRD9 1551 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms